RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 CCL20P78556 96 aa5.46□□□□□ -1.54
SMARCB1-207ENST00000491967 KRTAP26-1Q6PEX3 210 aa5.46□□□□□ -1.54
SMARCB1-207ENST00000491967 PRR34Q9NV39 138 aa5.46□□□□□ -1.54
SMARCB1-207ENST00000491967 IGKV2D-24A0A075B6R9 120 aa5.45□□□□□ -1.54
SMARCB1-207ENST00000491967 A0A087WX48 190 aa5.45□□□□□ -1.54
SMARCB1-207ENST00000491967 C19orf71A6NCJ1 209 aa5.45□□□□□ -1.54
SMARCB1-207ENST00000491967 KRTAP29-1A8MX34 341 aaPredicted RBP5.45□□□□□ -1.54
SMARCB1-207ENST00000491967 M0QY20 66 aa5.45□□□□□ -1.54
SMARCB1-207ENST00000491967 PLA2G1BP04054 148 aaKnown RBP5.45□□□□□ -1.54
SMARCB1-207ENST00000491967 RPL35P42766 123 aaKnown RBP5.45□□□□□ -1.54
SMARCB1-207ENST00000491967 RAB5CP51148 216 aa5.45□□□□□ -1.54
SMARCB1-207ENST00000491967 SCXQ7RTU7 201 aa5.45□□□□□ -1.54
SMARCB1-207ENST00000491967 UBE2WQ96B02 151 aa5.45□□□□□ -1.54
SMARCB1-207ENST00000491967 SMIM12Q96EX1 92 aa5.45□□□□□ -1.54
SMARCB1-207ENST00000491967 CHAC1Q9BUX1 264 aa5.45□□□□□ -1.54
SMARCB1-207ENST00000491967 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.44□□□□□ -1.54
SMARCB1-207ENST00000491967 RBFOX3A6NFN3 312 aa5.44□□□□□ -1.54
SMARCB1-207ENST00000491967 PKIAP61925 76 aa5.44□□□□□ -1.54
SMARCB1-207ENST00000491967 IQCJQ1A5X6 159 aa5.44□□□□□ -1.54
SMARCB1-207ENST00000491967 LINC01620Q4KN68 170 aa5.44□□□□□ -1.54
SMARCB1-207ENST00000491967 MPV17L2Q567V2 206 aa5.44□□□□□ -1.54
SMARCB1-207ENST00000491967 TMEM97Q5BJF2 176 aa5.44□□□□□ -1.54
SMARCB1-207ENST00000491967 SLC51BQ86UW2 128 aa5.44□□□□□ -1.54
SMARCB1-207ENST00000491967 LINC00528Q8N1L1 170 aa5.44□□□□□ -1.54
SMARCB1-207ENST00000491967 DERL1Q9BUN8 251 aa5.44□□□□□ -1.54
SMARCB1-207ENST00000491967 MANBALQ9NQG1 85 aa5.44□□□□□ -1.54
SMARCB1-207ENST00000491967 A0A1B0GV50 99 aa5.43□□□□□ -1.54
SMARCB1-207ENST00000491967 ZNF56Q15929 161 aa5.43□□□□□ -1.54
SMARCB1-207ENST00000491967 MIAQ16674 131 aa5.43□□□□□ -1.54
SMARCB1-207ENST00000491967 C14orf177Q52M58 125 aa5.43□□□□□ -1.54
SMARCB1-207ENST00000491967 SPANXN1Q5VSR9 72 aa5.43□□□□□ -1.54
SMARCB1-207ENST00000491967 DGAT2L7PQ6IED9 249 aa5.43□□□□□ -1.54
SMARCB1-207ENST00000491967 WDR73Q6P4I2 378 aa5.43□□□□□ -1.54
SMARCB1-207ENST00000491967 CIRBP-AS1Q8TBR5 109 aa5.43□□□□□ -1.54
SMARCB1-207ENST00000491967 DEFB104AQ8WTQ1 72 aa5.43□□□□□ -1.54
SMARCB1-207ENST00000491967 TRBV20OR9-2A0A075B6H5 130 aa5.42□□□□□ -1.54
SMARCB1-207ENST00000491967 MUC21A0A0G2JKD1 596 aa5.42□□□□□ -1.54
SMARCB1-207ENST00000491967 MUC21A0A140T8X8 626 aa5.42□□□□□ -1.54
SMARCB1-207ENST00000491967 A0A1B0GUV1 79 aa5.42□□□□□ -1.54
SMARCB1-207ENST00000491967 TMEM262E9PQX1 116 aa5.42□□□□□ -1.54
SMARCB1-207ENST00000491967 F2Z2F3 143 aa5.42□□□□□ -1.54
SMARCB1-207ENST00000491967 F5H697 171 aa5.42□□□□□ -1.54
SMARCB1-207ENST00000491967 SULT1A2P50226 295 aa5.42□□□□□ -1.54
SMARCB1-207ENST00000491967 RPS20P60866 119 aaKnown RBP5.42□□□□□ -1.54
SMARCB1-207ENST00000491967 RBX1P62877 108 aa5.42□□□□□ -1.54
SMARCB1-207ENST00000491967 CACNG7P62955 275 aa5.42□□□□□ -1.54
SMARCB1-207ENST00000491967 CENPWQ5EE01 88 aa5.42□□□□□ -1.54
SMARCB1-207ENST00000491967 EIF5AL1Q6IS14 154 aaKnown RBP5.42□□□□□ -1.54
SMARCB1-207ENST00000491967 KCNIP4Q6PIL6 250 aa5.42□□□□□ -1.54
SMARCB1-207ENST00000491967 ALKAL2Q6UX46 152 aa5.42□□□□□ -1.54
SMARCB1-207ENST00000491967 C15orf54Q8N8G6 183 aa5.42□□□□□ -1.54
SMARCB1-207ENST00000491967 AP1S3Q96PC3 154 aa5.42□□□□□ -1.54
SMARCB1-207ENST00000491967 C1orf43Q9BWL3 253 aa5.42□□□□□ -1.54
SMARCB1-207ENST00000491967 CNFNQ9BYD5 112 aa5.42□□□□□ -1.54
SMARCB1-207ENST00000491967 GNG13Q9P2W3 67 aa5.42□□□□□ -1.54
SMARCB1-207ENST00000491967 RAB19A4D1S5 217 aa5.41□□□□□ -1.54
SMARCB1-207ENST00000491967 USP17L23D6RBM5 183 aa5.41□□□□□ -1.54
SMARCB1-207ENST00000491967 PDE6DO43924 150 aa5.41□□□□□ -1.54
SMARCB1-207ENST00000491967 ANGP03950 147 aaKnown RBP5.41□□□□□ -1.54
SMARCB1-207ENST00000491967 PRSS1P07477 247 aa5.41□□□□□ -1.54
SMARCB1-207ENST00000491967 GZMBP10144 247 aa5.41□□□□□ -1.54
SMARCB1-207ENST00000491967 MEF2BQ02080 365 aaPredicted RBP5.41□□□□□ -1.54
SMARCB1-207ENST00000491967 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.41□□□□□ -1.54
SMARCB1-207ENST00000491967 FER1L6-AS1Q8NA97 138 aa5.41□□□□□ -1.54
SMARCB1-207ENST00000491967 CHCHD5Q9BSY4 110 aa5.41□□□□□ -1.54
SMARCB1-207ENST00000491967 TRBV25-1A0A075B6N4 114 aa5.4□□□□□ -1.54
SMARCB1-207ENST00000491967 H7C1H1 209 aa5.4□□□□□ -1.54
SMARCB1-207ENST00000491967 SMIM17P0DL12 118 aa5.4□□□□□ -1.54
SMARCB1-207ENST00000491967 CTRLP40313 264 aa5.4□□□□□ -1.54
SMARCB1-207ENST00000491967 SUMO4Q6EEV6 95 aa5.4□□□□□ -1.54
SMARCB1-207ENST00000491967 SDIM1Q6ZPB5 146 aa5.4□□□□□ -1.54
SMARCB1-207ENST00000491967 LINC00269Q8N2A0 174 aa5.4□□□□□ -1.54
SMARCB1-207ENST00000491967 C9orf163Q8N9P6 203 aa5.4□□□□□ -1.54
SMARCB1-207ENST00000491967 OR2D3Q8NGH3 330 aa5.4□□□□□ -1.54
SMARCB1-207ENST00000491967 PGLYRP4Q96LB8 373 aa5.4□□□□□ -1.54
SMARCB1-207ENST00000491967 TRAV8-4A0A0B4J246 113 aa5.39□□□□□ -1.55
SMARCB1-207ENST00000491967 IGHV1-24A0A0C4DH33 117 aa5.39□□□□□ -1.55
SMARCB1-207ENST00000491967 XKRY2A2RUG3 117 aa5.39□□□□□ -1.55
SMARCB1-207ENST00000491967 TEX46H3BTG2 121 aa5.39□□□□□ -1.55
SMARCB1-207ENST00000491967 P01737 135 aa5.39□□□□□ -1.55
SMARCB1-207ENST00000491967 CRPP02741 224 aa5.39□□□□□ -1.55
SMARCB1-207ENST00000491967 BCL2P10415 239 aa5.39□□□□□ -1.55
SMARCB1-207ENST00000491967 NTF3P20783 257 aa5.39□□□□□ -1.55
SMARCB1-207ENST00000491967 TAGLN2P37802 199 aaKnown RBP5.39□□□□□ -1.55
SMARCB1-207ENST00000491967 GNG4P50150 75 aa5.39□□□□□ -1.55
SMARCB1-207ENST00000491967 CNBPP62633 177 aaKnown RBP5.39□□□□□ -1.55
SMARCB1-207ENST00000491967 GAGE6Q13070 117 aa5.39□□□□□ -1.55
SMARCB1-207ENST00000491967 CIRBPQ14011 172 aaKnown RBP5.39□□□□□ -1.55
SMARCB1-207ENST00000491967 RASL11AQ6T310 242 aa5.39□□□□□ -1.55
SMARCB1-207ENST00000491967 LYZL1Q6UWQ5 148 aa5.39□□□□□ -1.55
SMARCB1-207ENST00000491967 C20orf203Q8NBC4 194 aa5.39□□□□□ -1.55
SMARCB1-207ENST00000491967 CLRN3Q8NCR9 226 aa5.39□□□□□ -1.55
SMARCB1-207ENST00000491967 DAZAP1Q96EP5 407 aaKnown RBP5.39□□□□□ -1.55
SMARCB1-207ENST00000491967 NIT2Q9NQR4 276 aa5.39□□□□□ -1.55
SMARCB1-207ENST00000491967 BIN3Q9NQY0 253 aa5.39□□□□□ -1.55
SMARCB1-207ENST00000491967 J3QL48 77 aa5.38□□□□□ -1.55
SMARCB1-207ENST00000491967 OXTP01178 125 aa5.38□□□□□ -1.55
SMARCB1-207ENST00000491967 SSTP61278 116 aa5.38□□□□□ -1.55
SMARCB1-207ENST00000491967 REG3AQ06141 175 aa5.38□□□□□ -1.55
SMARCB1-207ENST00000491967 TEX261Q6UWH6 196 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms