RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 TNP2Q05952 138 aa10.33□□□□□ -0.76
CDC42SE1-205ENST00000491825 NEGR1Q7Z3B1 354 aa10.33□□□□□ -0.76
CDC42SE1-205ENST00000491825 LINC00588Q9Y4M8 146 aa10.33□□□□□ -0.76
CDC42SE1-205ENST00000491825 SMIM15Q7Z3B0 74 aa10.32□□□□□ -0.76
CDC42SE1-205ENST00000491825 UPK3BQ9BT76 320 aa10.32□□□□□ -0.76
CDC42SE1-205ENST00000491825 KRTAP4-5Q9BYR2 181 aa10.32□□□□□ -0.76
CDC42SE1-205ENST00000491825 A0A1B0GW15 77 aa10.31□□□□□ -0.76
CDC42SE1-205ENST00000491825 TIRAPP58753 221 aa10.31□□□□□ -0.76
CDC42SE1-205ENST00000491825 RIGQ13278 110 aa10.31□□□□□ -0.76
CDC42SE1-205ENST00000491825 ESRGQ1W209 222 aa10.31□□□□□ -0.76
CDC42SE1-205ENST00000491825 F5H697 171 aa10.3□□□□□ -0.76
CDC42SE1-205ENST00000491825 H7C1H1 209 aa10.3□□□□□ -0.76
CDC42SE1-205ENST00000491825 MGPP08493 103 aa10.3□□□□□ -0.76
CDC42SE1-205ENST00000491825 RHEBQ15382 184 aa10.3□□□□□ -0.76
CDC42SE1-205ENST00000491825 SUMO4Q6EEV6 95 aa10.3□□□□□ -0.76
CDC42SE1-205ENST00000491825 ATP5L2Q7Z4Y8 100 aa10.3□□□□□ -0.76
CDC42SE1-205ENST00000491825 C6orf223Q8N319 242 aa10.3□□□□□ -0.76
CDC42SE1-205ENST00000491825 IMMP2LQ96T52 175 aa10.3□□□□□ -0.76
CDC42SE1-205ENST00000491825 CTDSP1Q9GZU7 261 aa10.3□□□□□ -0.76
CDC42SE1-205ENST00000491825 TMEM191AQ9H0A3 160 aa10.3□□□□□ -0.76
CDC42SE1-205ENST00000491825 MRPS16Q9Y3D3 137 aaKnown RBP10.3□□□□□ -0.76
CDC42SE1-205ENST00000491825 M0QY20 66 aa10.29□□□□□ -0.76
CDC42SE1-205ENST00000491825 LYPD5Q6UWN5 251 aa10.29□□□□□ -0.76
CDC42SE1-205ENST00000491825 FRZBQ92765 325 aa10.29□□□□□ -0.76
CDC42SE1-205ENST00000491825 TMEM242Q9NWH2 141 aa10.29□□□□□ -0.76
CDC42SE1-205ENST00000491825 Q9UF83 564 aa10.29□□□□□ -0.76
CDC42SE1-205ENST00000491825 TRBV7-3A0A075B6L6 115 aa10.28□□□□□ -0.76
CDC42SE1-205ENST00000491825 A0A087WWC5 75 aa10.28□□□□□ -0.76
CDC42SE1-205ENST00000491825 A0A1B0GXF2 115 aa10.28□□□□□ -0.76
CDC42SE1-205ENST00000491825 RPL36AP83881 106 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-205ENST00000491825 NDUFA5Q16718 116 aa10.28□□□□□ -0.76
CDC42SE1-205ENST00000491825 NEXN-AS1Q8NBZ9 246 aa10.28□□□□□ -0.76
CDC42SE1-205ENST00000491825 RPL36ALQ969Q0 106 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-205ENST00000491825 KRTAP1-5Q9BYS1 174 aa10.28□□□□□ -0.76
CDC42SE1-205ENST00000491825 GAGE12JA6NER3 117 aa10.27□□□□□ -0.77
CDC42SE1-205ENST00000491825 S100A8P05109 93 aa10.27□□□□□ -0.77
CDC42SE1-205ENST00000491825 UBE2D3P61077 147 aa10.27□□□□□ -0.77
CDC42SE1-205ENST00000491825 UBE2D2P62837 147 aa10.27□□□□□ -0.77
CDC42SE1-205ENST00000491825 HBBP68871 147 aa10.27□□□□□ -0.77
CDC42SE1-205ENST00000491825 GAGE1Q13065 139 aa10.27□□□□□ -0.77
CDC42SE1-205ENST00000491825 GAGE4Q13068 117 aa10.27□□□□□ -0.77
CDC42SE1-205ENST00000491825 GAGE5Q13069 117 aa10.27□□□□□ -0.77
CDC42SE1-205ENST00000491825 GAGE13Q4V321 117 aa10.27□□□□□ -0.77
CDC42SE1-205ENST00000491825 GATD1Q8NB37 220 aa10.27□□□□□ -0.77
CDC42SE1-205ENST00000491825 CLRN3Q8NCR9 226 aa10.27□□□□□ -0.77
CDC42SE1-205ENST00000491825 ATP6V0E2Q8NHE4 81 aa10.27□□□□□ -0.77
CDC42SE1-205ENST00000491825 DNAJC30Q96LL9 226 aa10.27□□□□□ -0.77
CDC42SE1-205ENST00000491825 C7orf77A4D0Y5 90 aa10.26□□□□□ -0.77
CDC42SE1-205ENST00000491825 RASL11AQ6T310 242 aa10.26□□□□□ -0.77
CDC42SE1-205ENST00000491825 SVBPQ8N300 66 aa10.26□□□□□ -0.77
CDC42SE1-205ENST00000491825 GTSF1LQ9H1H1 148 aa10.26□□□□□ -0.77
CDC42SE1-205ENST00000491825 TRAV9-1A0A075B6T8 112 aa10.25□□□□□ -0.77
CDC42SE1-205ENST00000491825 C16orf90A8MZG2 172 aa10.25□□□□□ -0.77
CDC42SE1-205ENST00000491825 CDK2AP2O75956 126 aa10.25□□□□□ -0.77
CDC42SE1-205ENST00000491825 APOC3P02656 99 aa10.25□□□□□ -0.77
CDC42SE1-205ENST00000491825 RNF185Q96GF1 192 aa10.25□□□□□ -0.77
CDC42SE1-205ENST00000491825 BTF3L4Q96K17 158 aa10.25□□□□□ -0.77
CDC42SE1-205ENST00000491825 Q9H8V8 135 aa10.25□□□□□ -0.77
CDC42SE1-205ENST00000491825 SNAPINO95295 136 aa10.24□□□□□ -0.77
CDC42SE1-205ENST00000491825 CAMPP49913 170 aa10.24□□□□□ -0.77
CDC42SE1-205ENST00000491825 MRPL54Q6P161 138 aaKnown RBP10.24□□□□□ -0.77
CDC42SE1-205ENST00000491825 KCNIP4Q6PIL6 250 aa10.24□□□□□ -0.77
CDC42SE1-205ENST00000491825 DAZ4Q86SG3 579 aaKnown RBP10.24□□□□□ -0.77
CDC42SE1-205ENST00000491825 AMN1Q8IY45 258 aa10.24□□□□□ -0.77
CDC42SE1-205ENST00000491825 MRAP2Q96G30 205 aa10.24□□□□□ -0.77
CDC42SE1-205ENST00000491825 NIT2Q9NQR4 276 aa10.24□□□□□ -0.77
CDC42SE1-205ENST00000491825 DAZ3Q9NR90 486 aaKnown RBP10.24□□□□□ -0.77
CDC42SE1-205ENST00000491825 TRAV26-2A0A0B4J265 109 aa10.23□□□□□ -0.77
CDC42SE1-205ENST00000491825 RAB4AP20338 218 aa10.23□□□□□ -0.77
CDC42SE1-205ENST00000491825 LELP1Q5T871 98 aa10.23□□□□□ -0.77
CDC42SE1-205ENST00000491825 FAM104BQ5XKR9 115 aa10.23□□□□□ -0.77
CDC42SE1-205ENST00000491825 SLC7A5P1Q8MH63 180 aa10.23□□□□□ -0.77
CDC42SE1-205ENST00000491825 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE1-205ENST00000491825 TNFRSF18Q9Y5U5 241 aa10.23□□□□□ -0.77
CDC42SE1-205ENST00000491825 TTC32Q5I0X7 151 aa10.22□□□□□ -0.77
CDC42SE1-205ENST00000491825 TRBV6-5A0A0K0K1A5 114 aa10.21□□□□□ -0.77
CDC42SE1-205ENST00000491825 SIVA1O15304 175 aa10.21□□□□□ -0.77
CDC42SE1-205ENST00000491825 S100PP25815 95 aa10.21□□□□□ -0.77
CDC42SE1-205ENST00000491825 RPS10P5Q9NQ39 176 aa10.21□□□□□ -0.77
CDC42SE1-205ENST00000491825 TRAV8-6A0A0B4J262 113 aa10.2□□□□□ -0.78
CDC42SE1-205ENST00000491825 DNAH10OSP0CZ25 163 aa10.2□□□□□ -0.78
CDC42SE1-205ENST00000491825 TMEM97Q5BJF2 176 aa10.2□□□□□ -0.78
CDC42SE1-205ENST00000491825 WFDC10BQ8IUB3 73 aa10.2□□□□□ -0.78
CDC42SE1-205ENST00000491825 K7EP13 123 aa10.19□□□□□ -0.78
CDC42SE1-205ENST00000491825 PPP1R17O96001 155 aa10.19□□□□□ -0.78
CDC42SE1-205ENST00000491825 MRPL51Q4U2R6 128 aaKnown RBP10.19□□□□□ -0.78
CDC42SE1-205ENST00000491825 OR10J3Q5JRS4 329 aa10.19□□□□□ -0.78
CDC42SE1-205ENST00000491825 SPATA12Q7Z6I5 190 aa10.19□□□□□ -0.78
CDC42SE1-205ENST00000491825 RPL39LQ96EH5 51 aaKnown RBP10.19□□□□□ -0.78
CDC42SE1-205ENST00000491825 TRBV6-8A0A0A6YYG3 113 aa10.18□□□□□ -0.78
CDC42SE1-205ENST00000491825 IGHV3-38A0A0C4DH36 116 aa10.18□□□□□ -0.78
CDC42SE1-205ENST00000491825 BTF3P20290 206 aaKnown RBP10.18□□□□□ -0.78
CDC42SE1-205ENST00000491825 KRTAP10-2P60368 255 aa10.18□□□□□ -0.78
CDC42SE1-205ENST00000491825 MAPKAPK5-AS1Q8N8E1 139 aa10.18□□□□□ -0.78
CDC42SE1-205ENST00000491825 GAS8-AS1O95177 125 aa10.17□□□□□ -0.78
CDC42SE1-205ENST00000491825 PPBPP02775 128 aa10.17□□□□□ -0.78
CDC42SE1-205ENST00000491825 RPS10P46783 165 aaKnown RBP10.17□□□□□ -0.78
CDC42SE1-205ENST00000491825 LINC01556Q5JQF7 62 aa10.17□□□□□ -0.78
CDC42SE1-205ENST00000491825 Q6ZRN7 208 aaPredicted RBP10.17□□□□□ -0.78
CDC42SE1-205ENST00000491825 NRACQ8N912 160 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms