RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 ABCA13Q86UQ4 5058 aa8.71□□□□□ -1.02
SEC61A1-206ENST00000491668 A0A087WWC5 75 aa8.7□□□□□ -1.02
SEC61A1-206ENST00000491668 PAX4O43316 350 aa8.7□□□□□ -1.02
SEC61A1-206ENST00000491668 EVI2AP22794 236 aa8.7□□□□□ -1.02
SEC61A1-206ENST00000491668 CRYBA4P53673 196 aa8.7□□□□□ -1.02
SEC61A1-206ENST00000491668 MRPL54Q6P161 138 aaKnown RBP8.7□□□□□ -1.02
SEC61A1-206ENST00000491668 A0A1B0GW15 77 aa8.69□□□□□ -1.02
SEC61A1-206ENST00000491668 S100A8P05109 93 aa8.69□□□□□ -1.02
SEC61A1-206ENST00000491668 CRYGDP07320 174 aa8.69□□□□□ -1.02
SEC61A1-206ENST00000491668 CAMPP49913 170 aa8.69□□□□□ -1.02
SEC61A1-206ENST00000491668 BTF3L4Q96K17 158 aa8.69□□□□□ -1.02
SEC61A1-206ENST00000491668 IMMP2LQ96T52 175 aa8.69□□□□□ -1.02
SEC61A1-206ENST00000491668 PRADC1Q9BSG0 188 aa8.69□□□□□ -1.02
SEC61A1-206ENST00000491668 DPH3P1Q9H4G8 78 aa8.69□□□□□ -1.02
SEC61A1-206ENST00000491668 TMEM242Q9NWH2 141 aa8.69□□□□□ -1.02
SEC61A1-206ENST00000491668 URGCP-MRPS24S4R325 110 aa8.69□□□□□ -1.02
SEC61A1-206ENST00000491668 GATA1P15976 413 aaPredicted RBP8.68□□□□□ -1.02
SEC61A1-206ENST00000491668 HBBP68871 147 aa8.68□□□□□ -1.02
SEC61A1-206ENST00000491668 RHOHQ15669 191 aa8.68□□□□□ -1.02
SEC61A1-206ENST00000491668 TRBV6-4A0A1B0GX49 114 aa8.67□□□□□ -1.02
SEC61A1-206ENST00000491668 K7EQD1 137 aa8.67□□□□□ -1.02
SEC61A1-206ENST00000491668 RAB4BP61018 213 aa8.67□□□□□ -1.02
SEC61A1-206ENST00000491668 ATP5L2Q7Z4Y8 100 aa8.67□□□□□ -1.02
SEC61A1-206ENST00000491668 SLC25A29Q8N8R3 303 aa8.67□□□□□ -1.02
SEC61A1-206ENST00000491668 ICOSQ9Y6W8 199 aa8.67□□□□□ -1.02
SEC61A1-206ENST00000491668 DNAH5Q8TE73 4624 aa8.67□□□□□ -1.02
SEC61A1-206ENST00000491668 APOBP04114 4563 aaKnown RBP8.67□□□□□ -1.02
SEC61A1-206ENST00000491668 GYPEP15421 78 aa8.66□□□□□ -1.02
SEC61A1-206ENST00000491668 TTC32Q5I0X7 151 aa8.66□□□□□ -1.02
SEC61A1-206ENST00000491668 UFSP1Q6NVU6 142 aa8.66□□□□□ -1.02
SEC61A1-206ENST00000491668 LYPD5Q6UWN5 251 aa8.66□□□□□ -1.02
SEC61A1-206ENST00000491668 Q6ZRN7 208 aaPredicted RBP8.66□□□□□ -1.02
SEC61A1-206ENST00000491668 KRTAP4-5Q9BYR2 181 aa8.66□□□□□ -1.02
SEC61A1-206ENST00000491668 TMEM191AQ9H0A3 160 aa8.66□□□□□ -1.02
SEC61A1-206ENST00000491668 TRAV9-1A0A075B6T8 112 aa8.65□□□□□ -1.02
SEC61A1-206ENST00000491668 H7C1H1 209 aa8.65□□□□□ -1.02
SEC61A1-206ENST00000491668 LINC00315P59091 139 aa8.65□□□□□ -1.02
SEC61A1-206ENST00000491668 MRPL23Q16540 153 aaKnown RBP8.65□□□□□ -1.02
SEC61A1-206ENST00000491668 Q6ZSN1 163 aa8.65□□□□□ -1.02
SEC61A1-206ENST00000491668 KIF25-AS1Q9Y6Z4 181 aa8.65□□□□□ -1.02
SEC61A1-206ENST00000491668 SIVA1O15304 175 aa8.64□□□□□ -1.03
SEC61A1-206ENST00000491668 SRIP30626 198 aa8.64□□□□□ -1.03
SEC61A1-206ENST00000491668 KRTAP10-2P60368 255 aa8.64□□□□□ -1.03
SEC61A1-206ENST00000491668 ATRAIDQ6UW56 229 aa8.64□□□□□ -1.03
SEC61A1-206ENST00000491668 TNFRSF18Q9Y5U5 241 aa8.64□□□□□ -1.03
SEC61A1-206ENST00000491668 TRBV10-1A0A0K0K1A3 114 aa8.63□□□□□ -1.03
SEC61A1-206ENST00000491668 LOC100131303A0A0U1RQF7 123 aa8.63□□□□□ -1.03
SEC61A1-206ENST00000491668 A0A1B0GXF2 115 aa8.63□□□□□ -1.03
SEC61A1-206ENST00000491668 GAGE12JA6NER3 117 aa8.63□□□□□ -1.03
SEC61A1-206ENST00000491668 C16orf90A8MZG2 172 aa8.63□□□□□ -1.03
SEC61A1-206ENST00000491668 RPL36AP83881 106 aaKnown RBP8.63□□□□□ -1.03
SEC61A1-206ENST00000491668 GAGE1Q13065 139 aa8.63□□□□□ -1.03
SEC61A1-206ENST00000491668 GAGE4Q13068 117 aa8.63□□□□□ -1.03
SEC61A1-206ENST00000491668 GAGE5Q13069 117 aa8.63□□□□□ -1.03
SEC61A1-206ENST00000491668 GAGE13Q4V321 117 aa8.63□□□□□ -1.03
SEC61A1-206ENST00000491668 SUMO4Q6EEV6 95 aa8.63□□□□□ -1.03
SEC61A1-206ENST00000491668 NEGR1Q7Z3B1 354 aa8.63□□□□□ -1.03
SEC61A1-206ENST00000491668 SPATA12Q7Z6I5 190 aa8.63□□□□□ -1.03
SEC61A1-206ENST00000491668 AMN1Q8IY45 258 aa8.63□□□□□ -1.03
SEC61A1-206ENST00000491668 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.63□□□□□ -1.03
SEC61A1-206ENST00000491668 RPL36ALQ969Q0 106 aaKnown RBP8.63□□□□□ -1.03
SEC61A1-206ENST00000491668 SMCO4Q9NRQ5 59 aa8.63□□□□□ -1.03
SEC61A1-206ENST00000491668 BTF3P20290 206 aaKnown RBP8.62□□□□□ -1.03
SEC61A1-206ENST00000491668 FAM104BQ5XKR9 115 aa8.62□□□□□ -1.03
SEC61A1-206ENST00000491668 RASL11AQ6T310 242 aa8.62□□□□□ -1.03
SEC61A1-206ENST00000491668 SH2D6Q7Z4S9 175 aa8.62□□□□□ -1.03
SEC61A1-206ENST00000491668 WFDC10BQ8IUB3 73 aa8.62□□□□□ -1.03
SEC61A1-206ENST00000491668 TRAV26-2A0A0B4J265 109 aa8.61□□□□□ -1.03
SEC61A1-206ENST00000491668 M0QY20 66 aa8.61□□□□□ -1.03
SEC61A1-206ENST00000491668 RAB4AP20338 218 aa8.61□□□□□ -1.03
SEC61A1-206ENST00000491668 S100A1P23297 94 aa8.61□□□□□ -1.03
SEC61A1-206ENST00000491668 MRAP2Q96G30 205 aa8.61□□□□□ -1.03
SEC61A1-206ENST00000491668 TRBV7-3A0A075B6L6 115 aa8.6□□□□□ -1.03
SEC61A1-206ENST00000491668 ATP6V1G1O75348 118 aa8.6□□□□□ -1.03
SEC61A1-206ENST00000491668 CKS2P33552 79 aa8.6□□□□□ -1.03
SEC61A1-206ENST00000491668 ELOBQ15370 118 aa8.6□□□□□ -1.03
SEC61A1-206ENST00000491668 COX19Q49B96 90 aa8.6□□□□□ -1.03
SEC61A1-206ENST00000491668 CBLN2Q8IUK8 224 aa8.6□□□□□ -1.03
SEC61A1-206ENST00000491668 GATD1Q8NB37 220 aa8.6□□□□□ -1.03
SEC61A1-206ENST00000491668 NEXN-AS1Q8NBZ9 246 aa8.6□□□□□ -1.03
SEC61A1-206ENST00000491668 ATP6V0E2Q8NHE4 81 aa8.6□□□□□ -1.03
SEC61A1-206ENST00000491668 FRZBQ92765 325 aa8.6□□□□□ -1.03
SEC61A1-206ENST00000491668 NIT2Q9NQR4 276 aa8.6□□□□□ -1.03
SEC61A1-206ENST00000491668 TGIF2-C20orf24A0A0A6YYL0 155 aa8.59□□□□□ -1.03
SEC61A1-206ENST00000491668 CDK2AP2O75956 126 aa8.59□□□□□ -1.03
SEC61A1-206ENST00000491668 MRPL51Q4U2R6 128 aaKnown RBP8.59□□□□□ -1.03
SEC61A1-206ENST00000491668 OR10J3Q5JRS4 329 aa8.59□□□□□ -1.03
SEC61A1-206ENST00000491668 RNF185Q96GF1 192 aa8.59□□□□□ -1.03
SEC61A1-206ENST00000491668 DNAJC30Q96LL9 226 aa8.59□□□□□ -1.03
SEC61A1-206ENST00000491668 SMKR1H3BMG3 65 aa8.58□□□□□ -1.04
SEC61A1-206ENST00000491668 NCR2O95944 276 aa8.58□□□□□ -1.04
SEC61A1-206ENST00000491668 PPP1R17O96001 155 aa8.58□□□□□ -1.04
SEC61A1-206ENST00000491668 HLA-DQA1P01909 254 aa8.58□□□□□ -1.04
SEC61A1-206ENST00000491668 DNAH10OSP0CZ25 163 aa8.58□□□□□ -1.04
SEC61A1-206ENST00000491668 FUSP35637 526 aaKnown RBP eCLIP8.58□□□□□ -1.04
SEC61A1-206ENST00000491668 GNB1LQ9BYB4 327 aa8.58□□□□□ -1.04
SEC61A1-206ENST00000491668 Q9UF83 564 aa8.58□□□□□ -1.04
SEC61A1-206ENST00000491668 TRBV24-1A0A075B6N3 115 aa8.57□□□□□ -1.04
SEC61A1-206ENST00000491668 D6R8Y8 96 aa8.57□□□□□ -1.04
SEC61A1-206ENST00000491668 APCSP02743 223 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms