RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 RBX1P62877 108 aa8.58□□□□□ -1.04
USF1-206ENST00000491629 UBE2L3P68036 154 aaKnown RBP8.58□□□□□ -1.04
USF1-206ENST00000491629 ELOBQ15370 118 aa8.58□□□□□ -1.04
USF1-206ENST00000491629 IQCJQ1A5X6 159 aa8.58□□□□□ -1.04
USF1-206ENST00000491629 ZNF506Q5JVG8 444 aa8.58□□□□□ -1.04
USF1-206ENST00000491629 WDR61Q9GZS3 305 aaKnown RBP8.58□□□□□ -1.04
USF1-206ENST00000491629 SDF2L1Q9HCN8 221 aa8.58□□□□□ -1.04
USF1-206ENST00000491629 RPH3ALQ9UNE2 315 aa8.58□□□□□ -1.04
USF1-206ENST00000491629 FABP4P15090 132 aa8.57□□□□□ -1.04
USF1-206ENST00000491629 GOLT1AQ6ZVE7 132 aa8.57□□□□□ -1.04
USF1-206ENST00000491629 Q8N976 141 aa8.57□□□□□ -1.04
USF1-206ENST00000491629 TMEM75Q8N9X5 138 aa8.57□□□□□ -1.04
USF1-206ENST00000491629 OTORQ9NRC9 128 aa8.57□□□□□ -1.04
USF1-206ENST00000491629 TRBV24-1A0A075B6N3 115 aa8.56□□□□□ -1.04
USF1-206ENST00000491629 PGPA6NDG6 321 aa8.56□□□□□ -1.04
USF1-206ENST00000491629 GAGE12JA6NER3 117 aa8.56□□□□□ -1.04
USF1-206ENST00000491629 H0YIZ8 118 aa8.56□□□□□ -1.04
USF1-206ENST00000491629 PPBPP02775 128 aa8.56□□□□□ -1.04
USF1-206ENST00000491629 NPSP0C0P6 89 aa8.56□□□□□ -1.04
USF1-206ENST00000491629 TRGC1P0CF51 173 aa8.56□□□□□ -1.04
USF1-206ENST00000491629 RNASE3P12724 160 aaKnown RBP8.56□□□□□ -1.04
USF1-206ENST00000491629 RPS20P60866 119 aaKnown RBP8.56□□□□□ -1.04
USF1-206ENST00000491629 RPL37AP61513 92 aaKnown RBP8.56□□□□□ -1.04
USF1-206ENST00000491629 GNG5P63218 68 aa8.56□□□□□ -1.04
USF1-206ENST00000491629 GAGE4Q13068 117 aa8.56□□□□□ -1.04
USF1-206ENST00000491629 GAGE5Q13069 117 aa8.56□□□□□ -1.04
USF1-206ENST00000491629 LRRC37A5PQ49AS3 106 aa8.56□□□□□ -1.04
USF1-206ENST00000491629 GAGE13Q4V321 117 aa8.56□□□□□ -1.04
USF1-206ENST00000491629 SMIM15Q7Z3B0 74 aa8.56□□□□□ -1.04
USF1-206ENST00000491629 KCNS1Q96KK3 526 aa8.56□□□□□ -1.04
USF1-206ENST00000491629 SGK494Q96LW2 274 aa8.56□□□□□ -1.04
USF1-206ENST00000491629 OR5AC2Q9NZP5 309 aa8.56□□□□□ -1.04
USF1-206ENST00000491629 GGTLC3B5MD39 225 aa8.55□□□□□ -1.04
USF1-206ENST00000491629 IGLV2-11P01706 119 aa8.55□□□□□ -1.04
USF1-206ENST00000491629 MGST1P10620 155 aaKnown RBP8.55□□□□□ -1.04
USF1-206ENST00000491629 UFSP1Q6NVU6 142 aa8.55□□□□□ -1.04
USF1-206ENST00000491629 SAMD10Q9BYL1 202 aa8.55□□□□□ -1.04
USF1-206ENST00000491629 JPT2Q9H910 190 aa8.55□□□□□ -1.04
USF1-206ENST00000491629 ZFP30Q9Y2G7 519 aa8.55□□□□□ -1.04
USF1-206ENST00000491629 IGKV2D-24A0A075B6R9 120 aa8.54□□□□□ -1.04
USF1-206ENST00000491629 PNRC1Q12796 327 aaPredicted RBP8.54□□□□□ -1.04
USF1-206ENST00000491629 ACOT6Q3I5F7 207 aaPredicted RBP8.54□□□□□ -1.04
USF1-206ENST00000491629 RPL7L1Q6DKI1 246 aaKnown RBP8.54□□□□□ -1.04
USF1-206ENST00000491629 NIT1Q86X76 327 aa8.54□□□□□ -1.04
USF1-206ENST00000491629 C14orf178Q8N769 122 aaPredicted RBP8.54□□□□□ -1.04
USF1-206ENST00000491629 OR2D3Q8NGH3 330 aa8.54□□□□□ -1.04
USF1-206ENST00000491629 PTH2Q96A98 100 aa8.54□□□□□ -1.04
USF1-206ENST00000491629 LINC00479Q96M42 142 aa8.54□□□□□ -1.04
USF1-206ENST00000491629 PARLQ9H300 379 aa8.54□□□□□ -1.04
USF1-206ENST00000491629 COX11Q9Y6N1 276 aa8.54□□□□□ -1.04
USF1-206ENST00000491629 BORCS7-ASMTA0A0B4J1R7 106 aa8.53□□□□□ -1.04
USF1-206ENST00000491629 PANO1I0J062 215 aa8.53□□□□□ -1.04
USF1-206ENST00000491629 CXCL1P09341 107 aa8.53□□□□□ -1.04
USF1-206ENST00000491629 FFAR4Q5NUL3 377 aa8.53□□□□□ -1.04
USF1-206ENST00000491629 CYB561D1Q8N8Q1 229 aa8.53□□□□□ -1.04
USF1-206ENST00000491629 ORAOV1Q8WV07 137 aa8.53□□□□□ -1.04
USF1-206ENST00000491629 ATP5SQ99766 215 aa8.53□□□□□ -1.04
USF1-206ENST00000491629 CTDSP1Q9GZU7 261 aa8.53□□□□□ -1.04
USF1-206ENST00000491629 KLK12Q9UKR0 248 aa8.53□□□□□ -1.04
USF1-206ENST00000491629 TRGC2P03986 189 aa8.52□□□□□ -1.05
USF1-206ENST00000491629 TAGLN2P37802 199 aaKnown RBP8.52□□□□□ -1.05
USF1-206ENST00000491629 COL5A1-AS1Q5SY13 56 aa8.52□□□□□ -1.05
USF1-206ENST00000491629 DMRTA1Q5VZB9 504 aa8.52□□□□□ -1.05
USF1-206ENST00000491629 TMEM18Q96B42 140 aa8.52□□□□□ -1.05
USF1-206ENST00000491629 EIF5A2Q9GZV4 153 aaKnown RBP8.52□□□□□ -1.05
USF1-206ENST00000491629 KCNIP2Q9NS61 270 aa8.52□□□□□ -1.05
USF1-206ENST00000491629 SRP19P09132 144 aaKnown RBP8.51□□□□□ -1.05
USF1-206ENST00000491629 ZFP2Q6ZN57 461 aa8.51□□□□□ -1.05
USF1-206ENST00000491629 CMTM2Q8TAZ6 248 aa8.51□□□□□ -1.05
USF1-206ENST00000491629 IMMP2LQ96T52 175 aa8.51□□□□□ -1.05
USF1-206ENST00000491629 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.51□□□□□ -1.05
USF1-206ENST00000491629 C17orf112F2Z3M2 114 aa8.5□□□□□ -1.05
USF1-206ENST00000491629 RPL12P30050 165 aaKnown RBP8.5□□□□□ -1.05
USF1-206ENST00000491629 UBE2WQ96B02 151 aa8.5□□□□□ -1.05
USF1-206ENST00000491629 RMI2Q96E14 147 aa8.5□□□□□ -1.05
USF1-206ENST00000491629 MIEN1Q9BRT3 115 aa8.5□□□□□ -1.05
USF1-206ENST00000491629 IGKV3D-20A0A0C4DH25 116 aa8.49□□□□□ -1.05
USF1-206ENST00000491629 TAS2R45P59539 299 aa8.49□□□□□ -1.05
USF1-206ENST00000491629 TGIF2-C20orf24A0A0A6YYL0 155 aa8.48□□□□□ -1.05
USF1-206ENST00000491629 HMGB3O15347 200 aaKnown RBP8.48□□□□□ -1.05
USF1-206ENST00000491629 ODF1Q14990 250 aa8.48□□□□□ -1.05
USF1-206ENST00000491629 ENHOQ6UWT2 76 aa8.48□□□□□ -1.05
USF1-206ENST00000491629 BTF3L4Q96K17 158 aa8.48□□□□□ -1.05
USF1-206ENST00000491629 WFDC1Q9HC57 220 aa8.48□□□□□ -1.05
USF1-206ENST00000491629 PSG8Q9UQ74 426 aa8.48□□□□□ -1.05
USF1-206ENST00000491629 C20orf202A1L168 122 aa8.47□□□□□ -1.05
USF1-206ENST00000491629 A8MWV9 139 aa8.47□□□□□ -1.05
USF1-206ENST00000491629 TCRAP04437 139 aa8.47□□□□□ -1.05
USF1-206ENST00000491629 PRSS1P07477 247 aa8.47□□□□□ -1.05
USF1-206ENST00000491629 PQLC2Q6ZP29 291 aa8.47□□□□□ -1.05
USF1-206ENST00000491629 NUDT10Q8NFP7 164 aa8.47□□□□□ -1.05
USF1-206ENST00000491629 SH3BGRL3Q9H299 93 aa8.47□□□□□ -1.05
USF1-206ENST00000491629 A6NJY4 79 aa8.46□□□□□ -1.06
USF1-206ENST00000491629 PRSS47A8MTI9 375 aa8.46□□□□□ -1.06
USF1-206ENST00000491629 PDZD11Q5EBL8 140 aa8.46□□□□□ -1.06
USF1-206ENST00000491629 PIK3CD-AS1Q5SR53 167 aa8.46□□□□□ -1.06
USF1-206ENST00000491629 Q6ZRU5 148 aa8.46□□□□□ -1.06
USF1-206ENST00000491629 LINC01551Q86U37 167 aa8.46□□□□□ -1.06
USF1-206ENST00000491629 SMIM3Q9BZL3 60 aa8.46□□□□□ -1.06
USF1-206ENST00000491629 URGCP-MRPS24S4R325 110 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms