RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 DEFB1P60022 68 aa16.82■□□□□ 0.28
USF3-203ENST00000491165 CEND1Q8N111 149 aa16.82■□□□□ 0.28
USF3-203ENST00000491165 TM2D2Q9BX73 214 aa16.82■□□□□ 0.28
USF3-203ENST00000491165 H7C1H1 209 aa16.81■□□□□ 0.28
USF3-203ENST00000491165 K7EMI3 77 aa16.81■□□□□ 0.28
USF3-203ENST00000491165 C14orf178Q8N769 122 aaPredicted RBP16.81■□□□□ 0.28
USF3-203ENST00000491165 F8VRH5 84 aa16.81■□□□□ 0.28
USF3-203ENST00000491165 SPRY2O43597 315 aa16.81■□□□□ 0.28
USF3-203ENST00000491165 RNASE4P34096 147 aaKnown RBP16.81■□□□□ 0.28
USF3-203ENST00000491165 DYNLRB2Q8TF09 96 aa16.81■□□□□ 0.28
USF3-203ENST00000491165 TOMM6Q96B49 74 aa16.81■□□□□ 0.28
USF3-203ENST00000491165 APRG1Q8IVJ8 170 aa16.8■□□□□ 0.28
USF3-203ENST00000491165 MAPKAPK5-AS1Q8N8E1 139 aa16.8■□□□□ 0.28
USF3-203ENST00000491165 SCGB3A1Q96QR1 104 aa16.8■□□□□ 0.28
USF3-203ENST00000491165 IGLV1-51P01701 117 aa16.79■□□□□ 0.28
USF3-203ENST00000491165 DCANP1Q8TF63 244 aa16.79■□□□□ 0.28
USF3-203ENST00000491165 RPL39LQ96EH5 51 aaKnown RBP16.79■□□□□ 0.28
USF3-203ENST00000491165 TRBV7-9A0A0J9YWB2 115 aa16.79■□□□□ 0.28
USF3-203ENST00000491165 F6UB75 175 aa16.78■□□□□ 0.28
USF3-203ENST00000491165 MGPP08493 103 aa16.78■□□□□ 0.28
USF3-203ENST00000491165 TAL2Q16559 108 aa16.78■□□□□ 0.28
USF3-203ENST00000491165 NHP2Q9NX24 153 aaKnown RBP16.78■□□□□ 0.28
USF3-203ENST00000491165 K7ERJ3 54 aa16.78■□□□□ 0.28
USF3-203ENST00000491165 PHLDA1Q8WV24 401 aaPredicted RBP16.78■□□□□ 0.28
USF3-203ENST00000491165 CHTOPQ9Y3Y2 248 aaKnown RBP16.78■□□□□ 0.28
USF3-203ENST00000491165 NEXN-AS1Q8NBZ9 246 aa16.76■□□□□ 0.27
USF3-203ENST00000491165 GNRH2O43555 120 aa16.76■□□□□ 0.27
USF3-203ENST00000491165 PPP1R17O96001 155 aa16.76■□□□□ 0.27
USF3-203ENST00000491165 RNASE3P12724 160 aaKnown RBP16.76■□□□□ 0.27
USF3-203ENST00000491165 KRTAP21-3Q3LHN1 58 aa16.76■□□□□ 0.27
USF3-203ENST00000491165 NEGR1Q7Z3B1 354 aa16.75■□□□□ 0.27
USF3-203ENST00000491165 C2orf66Q6UXQ4 117 aa16.74■□□□□ 0.27
USF3-203ENST00000491165 OR11H12B2RN74 326 aa16.73■□□□□ 0.27
USF3-203ENST00000491165 COTL1Q14019 142 aa16.73■□□□□ 0.27
USF3-203ENST00000491165 OXLD1Q5BKU9 147 aa16.73■□□□□ 0.27
USF3-203ENST00000491165 OR11H2Q8NH07 326 aa16.73■□□□□ 0.27
USF3-203ENST00000491165 ZNF256Q9Y2P7 627 aaPredicted RBP16.73■□□□□ 0.27
USF3-203ENST00000491165 NXPH4O95158 308 aa16.73■□□□□ 0.27
USF3-203ENST00000491165 C9orf66Q5T8R8 295 aa16.73■□□□□ 0.27
USF3-203ENST00000491165 K7EQG2 157 aa16.72■□□□□ 0.27
USF3-203ENST00000491165 POM121L12Q8N7R1 296 aa16.72■□□□□ 0.27
USF3-203ENST00000491165 BAALCQ8WXS3 180 aa16.72■□□□□ 0.27
USF3-203ENST00000491165 HIST1H4GQ99525 98 aa16.72■□□□□ 0.27
USF3-203ENST00000491165 DNAH3Q8TD57 4116 aa16.72■□□□□ 0.27
USF3-203ENST00000491165 G3V4G9 280 aa16.71■□□□□ 0.27
USF3-203ENST00000491165 CSTL1Q9H114 145 aa16.71■□□□□ 0.27
USF3-203ENST00000491165 MGAM2Q2M2H8 2515 aa16.71■□□□□ 0.27
USF3-203ENST00000491165 NBEAL1Q6ZS30 2694 aa16.71■□□□□ 0.27
USF3-203ENST00000491165 MYMXA0A1B0GTQ4 84 aa16.7■□□□□ 0.26
USF3-203ENST00000491165 KLLNB2CW77 178 aa16.7■□□□□ 0.26
USF3-203ENST00000491165 INSL3P51460 131 aa16.7■□□□□ 0.26
USF3-203ENST00000491165 AGRNO00468 2067 aa16.7■□□□□ 0.26
USF3-203ENST00000491165 NOTCH1P46531 2555 aa16.69■□□□□ 0.26
USF3-203ENST00000491165 E9PLD3 99 aa16.69■□□□□ 0.26
USF3-203ENST00000491165 ZNF688P0C7X2 276 aa16.69■□□□□ 0.26
USF3-203ENST00000491165 ID1P41134 155 aa16.69■□□□□ 0.26
USF3-203ENST00000491165 SPAG8Q99932 426 aaPredicted RBP16.69■□□□□ 0.26
USF3-203ENST00000491165 TRAV25A0A0B4J276 109 aa16.69■□□□□ 0.26
USF3-203ENST00000491165 C12orf74Q32Q52 190 aa16.69■□□□□ 0.26
USF3-203ENST00000491165 FAM159AQ6UWV7 190 aa16.69■□□□□ 0.26
USF3-203ENST00000491165 TRBV7-3A0A075B6L6 115 aa16.68■□□□□ 0.26
USF3-203ENST00000491165 IGLL5B9A064 214 aa16.68■□□□□ 0.26
USF3-203ENST00000491165 WIPF1O43516 503 aa16.68■□□□□ 0.26
USF3-203ENST00000491165 SAMD13Q5VXD3 122 aa16.68■□□□□ 0.26
USF3-203ENST00000491165 KIF25-AS1Q9Y6Z4 181 aa16.68■□□□□ 0.26
USF3-203ENST00000491165 PRSS29PA6NIE9 313 aa16.67■□□□□ 0.26
USF3-203ENST00000491165 RPL32P62910 135 aaKnown RBP16.67■□□□□ 0.26
USF3-203ENST00000491165 LINC00315P59091 139 aa16.66■□□□□ 0.26
USF3-203ENST00000491165 ZNF479Q96JC4 524 aa16.66■□□□□ 0.26
USF3-203ENST00000491165 CD7P09564 240 aa16.66■□□□□ 0.26
USF3-203ENST00000491165 CYSLTR1Q9Y271 337 aa16.66■□□□□ 0.26
USF3-203ENST00000491165 MUC4Q99102 2169 aa16.65■□□□□ 0.26
USF3-203ENST00000491165 ODF3L2Q3SX64 289 aa16.65■□□□□ 0.26
USF3-203ENST00000491165 BEAN1Q3B7T3 259 aa16.64■□□□□ 0.25
USF3-203ENST00000491165 PRADC1Q9BSG0 188 aa16.64■□□□□ 0.25
USF3-203ENST00000491165 FOXI2Q6ZQN5 318 aa16.64■□□□□ 0.25
USF3-203ENST00000491165 WFDC10AQ9H1F0 79 aa16.64■□□□□ 0.25
USF3-203ENST00000491165 TRAV2A0A0B4J234 112 aa16.63■□□□□ 0.25
USF3-203ENST00000491165 LINC01549A6NIU2 74 aa16.63■□□□□ 0.25
USF3-203ENST00000491165 DUSP14O95147 198 aaKnown RBP16.63■□□□□ 0.25
USF3-203ENST00000491165 MAP6D1Q9H9H5 199 aa16.63■□□□□ 0.25
USF3-203ENST00000491165 SUMO4Q6EEV6 95 aa16.63■□□□□ 0.25
USF3-203ENST00000491165 A0A1B0GWB2 263 aa16.62■□□□□ 0.25
USF3-203ENST00000491165 DEFB131AP59861 70 aa16.62■□□□□ 0.25
USF3-203ENST00000491165 KRTAP10-11P60412 298 aa16.62■□□□□ 0.25
USF3-203ENST00000491165 TP53TG1Q9Y2A0 90 aa16.62■□□□□ 0.25
USF3-203ENST00000491165 TRAV12-3A0A0B4J271 114 aa16.61■□□□□ 0.25
USF3-203ENST00000491165 POLR2KP53803 58 aaKnown RBP16.61■□□□□ 0.25
USF3-203ENST00000491165 SNRPD3P62318 126 aaKnown RBP16.61■□□□□ 0.25
USF3-203ENST00000491165 JPT2Q9H910 190 aa16.61■□□□□ 0.25
USF3-203ENST00000491165 C19orf73Q9NVV2 129 aa16.61■□□□□ 0.25
USF3-203ENST00000491165 RPL24P83731 157 aaKnown RBP16.61■□□□□ 0.25
USF3-203ENST00000491165 ZFP2Q6ZN57 461 aa16.61■□□□□ 0.25
USF3-203ENST00000491165 ZNF815PA8K554 130 aa16.6■□□□□ 0.25
USF3-203ENST00000491165 CRYGDP07320 174 aa16.6■□□□□ 0.25
USF3-203ENST00000491165 RRN3P1Q2M238 152 aa16.6■□□□□ 0.25
USF3-203ENST00000491165 KIR2DL4Q99706 377 aa16.6■□□□□ 0.25
USF3-203ENST00000491165 A0A087WWL8 130 aa16.6■□□□□ 0.25
USF3-203ENST00000491165 VCYO14598 125 aa16.6■□□□□ 0.25
USF3-203ENST00000491165 IGIPA6NJ69 53 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms