RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 LINC00269Q8N2A0 174 aa9.68□□□□□ -0.86
SCAMP3-208ENST00000490999 SPACA4Q8TDM5 124 aa9.68□□□□□ -0.86
SCAMP3-208ENST00000490999 LINC01600Q96MT4 127 aa9.68□□□□□ -0.86
SCAMP3-208ENST00000490999 TCEAL7Q9BRU2 100 aa9.68□□□□□ -0.86
SCAMP3-208ENST00000490999 MAP1LC3BQ9GZQ8 125 aa9.68□□□□□ -0.86
SCAMP3-208ENST00000490999 FAM74A7A6NL05 159 aa9.67□□□□□ -0.86
SCAMP3-208ENST00000490999 KRBOX1C9JBD0 128 aa9.67□□□□□ -0.86
SCAMP3-208ENST00000490999 PHLDA3Q9Y5J5 127 aa9.67□□□□□ -0.86
SCAMP3-208ENST00000490999 IGHV3-64A0A075B6Q5 118 aa9.66□□□□□ -0.86
SCAMP3-208ENST00000490999 FABP5P3A8MUU1 101 aa9.66□□□□□ -0.86
SCAMP3-208ENST00000490999 BCL2L11O43521 198 aa9.66□□□□□ -0.86
SCAMP3-208ENST00000490999 SH2D1AO60880 128 aa9.66□□□□□ -0.86
SCAMP3-208ENST00000490999 CRIP1P50238 77 aa9.66□□□□□ -0.86
SCAMP3-208ENST00000490999 UBE2G2P60604 165 aa9.66□□□□□ -0.86
SCAMP3-208ENST00000490999 CNBPP62633 177 aaKnown RBP9.66□□□□□ -0.86
SCAMP3-208ENST00000490999 RBX1P62877 108 aa9.66□□□□□ -0.86
SCAMP3-208ENST00000490999 GAGE6Q13070 117 aa9.66□□□□□ -0.86
SCAMP3-208ENST00000490999 NEXN-AS1Q8NBZ9 246 aa9.66□□□□□ -0.86
SCAMP3-208ENST00000490999 MBD3L1Q8WWY6 194 aa9.66□□□□□ -0.86
SCAMP3-208ENST00000490999 ZNF471Q9BX82 626 aaPredicted RBP9.66□□□□□ -0.86
SCAMP3-208ENST00000490999 PRR34Q9NV39 138 aa9.66□□□□□ -0.86
SCAMP3-208ENST00000490999 PEX7O00628 323 aa9.65□□□□□ -0.86
SCAMP3-208ENST00000490999 SLPIP03973 132 aa9.65□□□□□ -0.86
SCAMP3-208ENST00000490999 TPT1P13693 172 aaKnown RBP9.65□□□□□ -0.86
SCAMP3-208ENST00000490999 PRR3P79522 188 aaKnown RBP9.65□□□□□ -0.86
SCAMP3-208ENST00000490999 ZNF56Q15929 161 aa9.65□□□□□ -0.86
SCAMP3-208ENST00000490999 OR10G8Q8NGN5 311 aa9.65□□□□□ -0.86
SCAMP3-208ENST00000490999 C7orf33Q8WU49 177 aa9.65□□□□□ -0.86
SCAMP3-208ENST00000490999 ZFP30Q9Y2G7 519 aa9.65□□□□□ -0.86
SCAMP3-208ENST00000490999 NTM-AS1Q6ZSK4 140 aa9.64□□□□□ -0.87
SCAMP3-208ENST00000490999 TMUB2Q71RG4 321 aa9.64□□□□□ -0.87
SCAMP3-208ENST00000490999 COX8CQ7Z4L0 72 aa9.64□□□□□ -0.87
SCAMP3-208ENST00000490999 ZFP82Q8N141 532 aa9.64□□□□□ -0.87
SCAMP3-208ENST00000490999 FMC1Q96HJ9 113 aa9.64□□□□□ -0.87
SCAMP3-208ENST00000490999 A0A0J9YXV3 536 aa9.63□□□□□ -0.87
SCAMP3-208ENST00000490999 TRBV6-1A0A0K0K1D8 114 aa9.63□□□□□ -0.87
SCAMP3-208ENST00000490999 PFDN1O60925 122 aa9.63□□□□□ -0.87
SCAMP3-208ENST00000490999 DNLZQ5SXM8 178 aa9.63□□□□□ -0.87
SCAMP3-208ENST00000490999 WDR73Q6P4I2 378 aa9.63□□□□□ -0.87
SCAMP3-208ENST00000490999 CLRN3Q8NCR9 226 aa9.63□□□□□ -0.87
SCAMP3-208ENST00000490999 SFT2D1Q8WV19 159 aa9.63□□□□□ -0.87
SCAMP3-208ENST00000490999 GTSF1Q8WW33 167 aa9.63□□□□□ -0.87
SCAMP3-208ENST00000490999 RNF185Q96GF1 192 aa9.63□□□□□ -0.87
SCAMP3-208ENST00000490999 PLAC8Q9NZF1 115 aa9.63□□□□□ -0.87
SCAMP3-208ENST00000490999 MUC21A0A0G2JKD1 596 aa9.62□□□□□ -0.87
SCAMP3-208ENST00000490999 RAB5CP51148 216 aa9.62□□□□□ -0.87
SCAMP3-208ENST00000490999 UBE2G1P62253 170 aa9.62□□□□□ -0.87
SCAMP3-208ENST00000490999 CST9LP1Q5W188 147 aa9.62□□□□□ -0.87
SCAMP3-208ENST00000490999 EIF5AL1Q6IS14 154 aaKnown RBP9.62□□□□□ -0.87
SCAMP3-208ENST00000490999 TCTE3Q8IZS6 198 aa9.62□□□□□ -0.87
SCAMP3-208ENST00000490999 FAM213BQ8TBF2 198 aa9.62□□□□□ -0.87
SCAMP3-208ENST00000490999 S100A9P06702 114 aaKnown RBP9.61□□□□□ -0.87
SCAMP3-208ENST00000490999 H2AFB1P0C5Y9 115 aa9.61□□□□□ -0.87
SCAMP3-208ENST00000490999 PKIAP61925 76 aa9.61□□□□□ -0.87
SCAMP3-208ENST00000490999 AP5S1Q9NUS5 200 aa9.61□□□□□ -0.87
SCAMP3-208ENST00000490999 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.6□□□□□ -0.87
SCAMP3-208ENST00000490999 IGKV2-24A0A0C4DH68 120 aa9.6□□□□□ -0.87
SCAMP3-208ENST00000490999 PAGE4O60829 102 aa9.6□□□□□ -0.87
SCAMP3-208ENST00000490999 RAB4BP61018 213 aa9.6□□□□□ -0.87
SCAMP3-208ENST00000490999 REG3AQ06141 175 aa9.6□□□□□ -0.87
SCAMP3-208ENST00000490999 FAM162BQ5T6X4 162 aa9.6□□□□□ -0.87
SCAMP3-208ENST00000490999 PRR27Q6MZM9 219 aa9.6□□□□□ -0.87
SCAMP3-208ENST00000490999 OR10AG1Q8NH19 301 aa9.6□□□□□ -0.87
SCAMP3-208ENST00000490999 LYPD6BQ8NI32 183 aa9.6□□□□□ -0.87
SCAMP3-208ENST00000490999 MUC21A0A140T8X8 626 aa9.59□□□□□ -0.87
SCAMP3-208ENST00000490999 KRTAP10-8P60410 259 aa9.59□□□□□ -0.87
SCAMP3-208ENST00000490999 COX6A2Q02221 97 aa9.59□□□□□ -0.87
SCAMP3-208ENST00000490999 MAJINQ3KP22 176 aa9.59□□□□□ -0.87
SCAMP3-208ENST00000490999 LINC01559Q495D7 138 aa9.59□□□□□ -0.87
SCAMP3-208ENST00000490999 Q6ZNX1 250 aa9.59□□□□□ -0.87
SCAMP3-208ENST00000490999 DERL1Q9BUN8 251 aa9.59□□□□□ -0.87
SCAMP3-208ENST00000490999 GFRA4Q9GZZ7 299 aa9.59□□□□□ -0.87
SCAMP3-208ENST00000490999 TRAV1-1A0A0B4J248 108 aa9.58□□□□□ -0.88
SCAMP3-208ENST00000490999 TEX46H3BTG2 121 aa9.58□□□□□ -0.88
SCAMP3-208ENST00000490999 LTAP01374 205 aa9.58□□□□□ -0.88
SCAMP3-208ENST00000490999 AKR1C3P42330 323 aa9.58□□□□□ -0.88
SCAMP3-208ENST00000490999 FAT4Q6V0I7 4981 aa9.57□□□□□ -0.88
SCAMP3-208ENST00000490999 TRBV25-1A0A075B6N4 114 aa9.57□□□□□ -0.88
SCAMP3-208ENST00000490999 SSTP61278 116 aa9.57□□□□□ -0.88
SCAMP3-208ENST00000490999 ZNF674Q2M3X9 581 aa9.57□□□□□ -0.88
SCAMP3-208ENST00000490999 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.57□□□□□ -0.88
SCAMP3-208ENST00000490999 C20orf203Q8NBC4 194 aa9.57□□□□□ -0.88
SCAMP3-208ENST00000490999 F5H697 171 aa9.56□□□□□ -0.88
SCAMP3-208ENST00000490999 SLC51BQ86UW2 128 aa9.56□□□□□ -0.88
SCAMP3-208ENST00000490999 C15orf56Q8N910 161 aa9.56□□□□□ -0.88
SCAMP3-208ENST00000490999 PRSS3P2Q8NHM4 247 aa9.56□□□□□ -0.88
SCAMP3-208ENST00000490999 MANBALQ9NQG1 85 aa9.56□□□□□ -0.88
SCAMP3-208ENST00000490999 IGLV4-60A0A075B6I1 120 aa9.55□□□□□ -0.88
SCAMP3-208ENST00000490999 SULT1A2P50226 295 aa9.55□□□□□ -0.88
SCAMP3-208ENST00000490999 HIGD2BQ4VC39 106 aa9.55□□□□□ -0.88
SCAMP3-208ENST00000490999 REG3GQ6UW15 175 aa9.55□□□□□ -0.88
SCAMP3-208ENST00000490999 STPG4Q8N801 248 aa9.55□□□□□ -0.88
SCAMP3-208ENST00000490999 VAX2Q9UIW0 290 aa9.55□□□□□ -0.88
SCAMP3-208ENST00000490999 A0A1B0GV50 99 aa9.54□□□□□ -0.88
SCAMP3-208ENST00000490999 IQCJQ1A5X6 159 aa9.54□□□□□ -0.88
SCAMP3-208ENST00000490999 KRTAP9-2Q9BYQ4 174 aa9.54□□□□□ -0.88
SCAMP3-208ENST00000490999 IGHV1-24A0A0C4DH33 117 aa9.53□□□□□ -0.88
SCAMP3-208ENST00000490999 SCO2A0A1W2PP80 73 aa9.53□□□□□ -0.88
SCAMP3-208ENST00000490999 TMEM97Q5BJF2 176 aa9.53□□□□□ -0.88
SCAMP3-208ENST00000490999 AKAP14Q86UN6 197 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms