RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 ZNF415Q09FC8 603 aa5.39□□□□□ -1.55
CLDN1-202ENST00000490800 AMN1Q8IY45 258 aa5.39□□□□□ -1.55
CLDN1-202ENST00000490800 KMT2AQ03164 3969 aa5.38□□□□□ -1.55
CLDN1-202ENST00000490800 RAB4AP20338 218 aa5.38□□□□□ -1.55
CLDN1-202ENST00000490800 SRIP30626 198 aa5.38□□□□□ -1.55
CLDN1-202ENST00000490800 NDUFA6P56556 154 aa5.38□□□□□ -1.55
CLDN1-202ENST00000490800 MRPL51Q4U2R6 128 aaKnown RBP5.38□□□□□ -1.55
CLDN1-202ENST00000490800 SMIM15Q7Z3B0 74 aa5.38□□□□□ -1.55
CLDN1-202ENST00000490800 RNASE8Q8TDE3 154 aaKnown RBP5.38□□□□□ -1.55
CLDN1-202ENST00000490800 TMEM263Q8WUH6 116 aaKnown RBP5.38□□□□□ -1.55
CLDN1-202ENST00000490800 PTH2Q96A98 100 aa5.38□□□□□ -1.55
CLDN1-202ENST00000490800 ALKBH7Q9BT30 221 aaPredicted RBP5.38□□□□□ -1.55
CLDN1-202ENST00000490800 SPXQ9BT56 116 aa5.38□□□□□ -1.55
CLDN1-202ENST00000490800 JPT2Q9H910 190 aa5.38□□□□□ -1.55
CLDN1-202ENST00000490800 KIF25-AS1Q9Y6Z4 181 aa5.38□□□□□ -1.55
CLDN1-202ENST00000490800 DNAH10Q8IVF4 4471 aa5.38□□□□□ -1.55
CLDN1-202ENST00000490800 PLAC8L1A1L4L8 177 aa5.37□□□□□ -1.55
CLDN1-202ENST00000490800 SMKR1H3BMG3 65 aa5.37□□□□□ -1.55
CLDN1-202ENST00000490800 M0R2P5 195 aa5.37□□□□□ -1.55
CLDN1-202ENST00000490800 LINC00315P59091 139 aa5.37□□□□□ -1.55
CLDN1-202ENST00000490800 ZNF876PQ49A33 203 aa5.37□□□□□ -1.55
CLDN1-202ENST00000490800 COA6Q5JTJ3 125 aaKnown RBP5.37□□□□□ -1.55
CLDN1-202ENST00000490800 LGALS9CQ6DKI2 356 aa5.37□□□□□ -1.55
CLDN1-202ENST00000490800 C14orf178Q8N769 122 aaPredicted RBP5.37□□□□□ -1.55
CLDN1-202ENST00000490800 C16orf74Q96GX8 76 aa5.37□□□□□ -1.55
CLDN1-202ENST00000490800 AP1S3Q96PC3 154 aa5.37□□□□□ -1.55
CLDN1-202ENST00000490800 C11orf68Q9H3H3 251 aaKnown RBP5.37□□□□□ -1.55
CLDN1-202ENST00000490800 IGHV4-28A0A0C4DH34 117 aa5.36□□□□□ -1.55
CLDN1-202ENST00000490800 C5orf52A6NGY3 159 aa5.36□□□□□ -1.55
CLDN1-202ENST00000490800 D6R8Y8 96 aa5.36□□□□□ -1.55
CLDN1-202ENST00000490800 GAS8-AS1O95177 125 aa5.36□□□□□ -1.55
CLDN1-202ENST00000490800 NCR2O95944 276 aa5.36□□□□□ -1.55
CLDN1-202ENST00000490800 S100A6P06703 90 aa5.36□□□□□ -1.55
CLDN1-202ENST00000490800 CRYGDP07320 174 aa5.36□□□□□ -1.55
CLDN1-202ENST00000490800 SNRPEP62304 92 aaKnown RBP5.36□□□□□ -1.55
CLDN1-202ENST00000490800 Q0VG73 95 aa5.36□□□□□ -1.55
CLDN1-202ENST00000490800 IQCJQ1A5X6 159 aa5.36□□□□□ -1.55
CLDN1-202ENST00000490800 RRN3P1Q2M238 152 aa5.36□□□□□ -1.55
CLDN1-202ENST00000490800 PIK3CD-AS1Q5SR53 167 aa5.36□□□□□ -1.55
CLDN1-202ENST00000490800 POM121L12Q8N7R1 296 aa5.36□□□□□ -1.55
CLDN1-202ENST00000490800 Q8NAQ8 132 aa5.36□□□□□ -1.55
CLDN1-202ENST00000490800 C18orf32Q8TCD1 76 aa5.36□□□□□ -1.55
CLDN1-202ENST00000490800 SAMD10Q9BYL1 202 aa5.36□□□□□ -1.55
CLDN1-202ENST00000490800 DPH3P1Q9H4G8 78 aa5.36□□□□□ -1.55
CLDN1-202ENST00000490800 MRPL16Q9NX20 251 aaKnown RBP5.36□□□□□ -1.55
CLDN1-202ENST00000490800 VPS13DQ5THJ4 4388 aa5.36□□□□□ -1.55
CLDN1-202ENST00000490800 NACAE9PAV3 2078 aa5.35□□□□□ -1.55
CLDN1-202ENST00000490800 TRAV26-2A0A0B4J265 109 aa5.35□□□□□ -1.55
CLDN1-202ENST00000490800 LOC105371267A0A1B0GV96 52 aa5.35□□□□□ -1.55
CLDN1-202ENST00000490800 SMIM9A6NGZ8 99 aa5.35□□□□□ -1.55
CLDN1-202ENST00000490800 IGLL5B9A064 214 aa5.35□□□□□ -1.55
CLDN1-202ENST00000490800 PPBPP02775 128 aa5.35□□□□□ -1.55
CLDN1-202ENST00000490800 MGPP08493 103 aa5.35□□□□□ -1.55
CLDN1-202ENST00000490800 SMIM17P0DL12 118 aa5.35□□□□□ -1.55
CLDN1-202ENST00000490800 MIFP14174 115 aa5.35□□□□□ -1.55
CLDN1-202ENST00000490800 GATA1P15976 413 aaPredicted RBP5.35□□□□□ -1.55
CLDN1-202ENST00000490800 CKS2P33552 79 aa5.35□□□□□ -1.55
CLDN1-202ENST00000490800 TIRAPP58753 221 aa5.35□□□□□ -1.55
CLDN1-202ENST00000490800 DAZ2Q13117 558 aaKnown RBP5.35□□□□□ -1.55
CLDN1-202ENST00000490800 OR10J3Q5JRS4 329 aa5.35□□□□□ -1.55
CLDN1-202ENST00000490800 UFSP1Q6NVU6 142 aa5.35□□□□□ -1.55
CLDN1-202ENST00000490800 ORMDL3Q8N138 153 aa5.35□□□□□ -1.55
CLDN1-202ENST00000490800 RASL10AQ92737 203 aa5.35□□□□□ -1.55
CLDN1-202ENST00000490800 MRAP2Q96G30 205 aa5.35□□□□□ -1.55
CLDN1-202ENST00000490800 PRELID3AQ96N28 172 aa5.35□□□□□ -1.55
CLDN1-202ENST00000490800 NOP10Q9NPE3 64 aaKnown RBP5.35□□□□□ -1.55
CLDN1-202ENST00000490800 APLNQ9ULZ1 77 aa5.35□□□□□ -1.55
CLDN1-202ENST00000490800 FRAS1Q86XX4 4008 aa5.35□□□□□ -1.55
CLDN1-202ENST00000490800 TRGV1A0A0A0MS02 117 aa5.34□□□□□ -1.55
CLDN1-202ENST00000490800 A8MWV9 139 aa5.34□□□□□ -1.55
CLDN1-202ENST00000490800 RS1O15537 224 aa5.34□□□□□ -1.55
CLDN1-202ENST00000490800 NUPR1O60356 82 aa5.34□□□□□ -1.55
CLDN1-202ENST00000490800 NPYP01303 97 aa5.34□□□□□ -1.55
CLDN1-202ENST00000490800 LGALS9BQ3B8N2 356 aa5.34□□□□□ -1.55
CLDN1-202ENST00000490800 CFAP126Q5VTH2 177 aa5.34□□□□□ -1.55
CLDN1-202ENST00000490800 Q6ZTI0 123 aa5.34□□□□□ -1.55
CLDN1-202ENST00000490800 BAGE3Q86Y29 109 aa5.34□□□□□ -1.55
CLDN1-202ENST00000490800 NRACQ8N912 160 aa5.34□□□□□ -1.55
CLDN1-202ENST00000490800 NDUFAF3Q9BU61 184 aa5.34□□□□□ -1.55
CLDN1-202ENST00000490800 IFITM10A6NMD0 228 aa5.33□□□□□ -1.56
CLDN1-202ENST00000490800 SERF1AO75920 110 aa5.33□□□□□ -1.56
CLDN1-202ENST00000490800 TCTAP57738 103 aa5.33□□□□□ -1.56
CLDN1-202ENST00000490800 C12orf74Q32Q52 190 aa5.33□□□□□ -1.56
CLDN1-202ENST00000490800 FAM74A4Q5TZK3 123 aa5.33□□□□□ -1.56
CLDN1-202ENST00000490800 SUMO4Q6EEV6 95 aa5.33□□□□□ -1.56
CLDN1-202ENST00000490800 Q6ZTC4 211 aa5.33□□□□□ -1.56
CLDN1-202ENST00000490800 HIST3H2BBQ8N257 126 aa5.33□□□□□ -1.56
CLDN1-202ENST00000490800 RPL39LQ96EH5 51 aaKnown RBP5.33□□□□□ -1.56
CLDN1-202ENST00000490800 URB1-AS1Q96HZ7 61 aa5.33□□□□□ -1.56
CLDN1-202ENST00000490800 LAMTOR2Q9Y2Q5 125 aa5.33□□□□□ -1.56
CLDN1-202ENST00000490800 IGHV3-73A0A0B4J1V6 119 aa5.32□□□□□ -1.56
CLDN1-202ENST00000490800 TRAV10A0A0B4J240 114 aa5.32□□□□□ -1.56
CLDN1-202ENST00000490800 TRAV4A0A0B4J268 109 aa5.32□□□□□ -1.56
CLDN1-202ENST00000490800 LOC389332A0A1B0GUA5 103 aa5.32□□□□□ -1.56
CLDN1-202ENST00000490800 M0QY20 66 aa5.32□□□□□ -1.56
CLDN1-202ENST00000490800 ESDP10768 282 aa5.32□□□□□ -1.56
CLDN1-202ENST00000490800 EMP1P54849 157 aa5.32□□□□□ -1.56
CLDN1-202ENST00000490800 SUMO2P61956 95 aaKnown RBP5.32□□□□□ -1.56
CLDN1-202ENST00000490800 ZNF56Q15929 161 aa5.32□□□□□ -1.56
CLDN1-202ENST00000490800 PDZD11Q5EBL8 140 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms