RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 SLC25A29Q8N8R3 303 aa7.72□□□□□ -1.17
VARS2-210ENST00000490699 MUC7Q8TAX7 377 aa7.72□□□□□ -1.17
VARS2-210ENST00000490699 DNAJC30Q96LL9 226 aa7.72□□□□□ -1.17
VARS2-210ENST00000490699 KIF25-AS1Q9Y6Z4 181 aa7.72□□□□□ -1.17
VARS2-210ENST00000490699 A0A0J9YY99 117 aa7.71□□□□□ -1.18
VARS2-210ENST00000490699 IGLL5B9A064 214 aa7.71□□□□□ -1.18
VARS2-210ENST00000490699 SCO1O75880 301 aa7.71□□□□□ -1.18
VARS2-210ENST00000490699 GYPEP15421 78 aa7.71□□□□□ -1.18
VARS2-210ENST00000490699 SRIP30626 198 aa7.71□□□□□ -1.18
VARS2-210ENST00000490699 RPS10P46783 165 aaKnown RBP7.71□□□□□ -1.18
VARS2-210ENST00000490699 TCTAP57738 103 aa7.71□□□□□ -1.18
VARS2-210ENST00000490699 FABP9Q0Z7S8 132 aa7.71□□□□□ -1.18
VARS2-210ENST00000490699 MRPL23Q16540 153 aaKnown RBP7.71□□□□□ -1.18
VARS2-210ENST00000490699 OR10J3Q5JRS4 329 aa7.71□□□□□ -1.18
VARS2-210ENST00000490699 UFSP1Q6NVU6 142 aa7.71□□□□□ -1.18
VARS2-210ENST00000490699 CEMP1Q6PRD7 247 aaPredicted RBP7.71□□□□□ -1.18
VARS2-210ENST00000490699 TMEM136Q6ZRR5 245 aa7.71□□□□□ -1.18
VARS2-210ENST00000490699 MRPL18Q9H0U6 180 aaKnown RBP7.71□□□□□ -1.18
VARS2-210ENST00000490699 NIT2Q9NQR4 276 aa7.71□□□□□ -1.18
VARS2-210ENST00000490699 LAMTOR2Q9Y2Q5 125 aa7.71□□□□□ -1.18
VARS2-210ENST00000490699 TENM3Q9P273 2699 aa7.7□□□□□ -1.18
VARS2-210ENST00000490699 NUDT3O95989 172 aa7.7□□□□□ -1.18
VARS2-210ENST00000490699 MRPL51Q4U2R6 128 aaKnown RBP7.7□□□□□ -1.18
VARS2-210ENST00000490699 ST20Q9HBF5 79 aa7.7□□□□□ -1.18
VARS2-210ENST00000490699 TRBV7-3A0A075B6L6 115 aa7.69□□□□□ -1.18
VARS2-210ENST00000490699 TRAV26-2A0A0B4J265 109 aa7.69□□□□□ -1.18
VARS2-210ENST00000490699 GAGE12JA6NER3 117 aa7.69□□□□□ -1.18
VARS2-210ENST00000490699 D6R8Y8 96 aa7.69□□□□□ -1.18
VARS2-210ENST00000490699 M0QY20 66 aa7.69□□□□□ -1.18
VARS2-210ENST00000490699 RAB5AP20339 215 aa7.69□□□□□ -1.18
VARS2-210ENST00000490699 LINC00315P59091 139 aa7.69□□□□□ -1.18
VARS2-210ENST00000490699 GAGE1Q13065 139 aa7.69□□□□□ -1.18
VARS2-210ENST00000490699 GAGE4Q13068 117 aa7.69□□□□□ -1.18
VARS2-210ENST00000490699 GAGE5Q13069 117 aa7.69□□□□□ -1.18
VARS2-210ENST00000490699 GAGE13Q4V321 117 aa7.69□□□□□ -1.18
VARS2-210ENST00000490699 RNF185Q96GF1 192 aa7.69□□□□□ -1.18
VARS2-210ENST00000490699 PRELID3AQ96N28 172 aa7.69□□□□□ -1.18
VARS2-210ENST00000490699 PRKDCP78527 4128 aaKnown RBP7.69□□□□□ -1.18
VARS2-210ENST00000490699 NACAE9PAV3 2078 aa7.69□□□□□ -1.18
VARS2-210ENST00000490699 COL7A1Q02388 2944 aa7.68□□□□□ -1.18
VARS2-210ENST00000490699 C3orf84H3BNL1 204 aa7.68□□□□□ -1.18
VARS2-210ENST00000490699 PHOX2AO14813 284 aa7.68□□□□□ -1.18
VARS2-210ENST00000490699 NCR2O95944 276 aa7.68□□□□□ -1.18
VARS2-210ENST00000490699 TMEM97Q5BJF2 176 aa7.68□□□□□ -1.18
VARS2-210ENST00000490699 ZFAND6Q6FIF0 208 aa7.68□□□□□ -1.18
VARS2-210ENST00000490699 NEGR1Q7Z3B1 354 aa7.68□□□□□ -1.18
VARS2-210ENST00000490699 ZNRF2Q8NHG8 242 aa7.68□□□□□ -1.18
VARS2-210ENST00000490699 YPEL4Q96NS1 127 aa7.68□□□□□ -1.18
VARS2-210ENST00000490699 MAP1LC3AQ9H492 121 aa7.68□□□□□ -1.18
VARS2-210ENST00000490699 TCAPO15273 167 aa7.67□□□□□ -1.18
VARS2-210ENST00000490699 PMCHP20382 165 aa7.67□□□□□ -1.18
VARS2-210ENST00000490699 Q6ZSN1 163 aa7.67□□□□□ -1.18
VARS2-210ENST00000490699 DAZ4Q86SG3 579 aaKnown RBP7.67□□□□□ -1.18
VARS2-210ENST00000490699 NEXN-AS1Q8NBZ9 246 aa7.67□□□□□ -1.18
VARS2-210ENST00000490699 ATP6V0E2Q8NHE4 81 aa7.67□□□□□ -1.18
VARS2-210ENST00000490699 C20orf78Q9BR46 151 aa7.67□□□□□ -1.18
VARS2-210ENST00000490699 DAZ3Q9NR90 486 aaKnown RBP7.67□□□□□ -1.18
VARS2-210ENST00000490699 DNAH9Q9NYC9 4486 aa7.67□□□□□ -1.18
VARS2-210ENST00000490699 HUWE1Q7Z6Z7 4374 aaKnown RBP7.66□□□□□ -1.18
VARS2-210ENST00000490699 TRBV6-5A0A0K0K1A5 114 aa7.66□□□□□ -1.18
VARS2-210ENST00000490699 COLCA2A8K830 154 aa7.66□□□□□ -1.18
VARS2-210ENST00000490699 SMKR1H3BMG3 65 aa7.66□□□□□ -1.18
VARS2-210ENST00000490699 TNFRSF6BO95407 300 aa7.66□□□□□ -1.18
VARS2-210ENST00000490699 P0DMU3 169 aa7.66□□□□□ -1.18
VARS2-210ENST00000490699 FAM231AP0DMU4 169 aa7.66□□□□□ -1.18
VARS2-210ENST00000490699 FAM231CP0DMU5 169 aa7.66□□□□□ -1.18
VARS2-210ENST00000490699 SUMO2P61956 95 aaKnown RBP7.66□□□□□ -1.18
VARS2-210ENST00000490699 RPL39LQ96EH5 51 aaKnown RBP7.66□□□□□ -1.18
VARS2-210ENST00000490699 VSIG2Q96IQ7 327 aa7.66□□□□□ -1.18
VARS2-210ENST00000490699 KIR2DL4Q99706 377 aa7.66□□□□□ -1.18
VARS2-210ENST00000490699 KRTAP4-7Q9BYR0 210 aa7.66□□□□□ -1.18
VARS2-210ENST00000490699 LOC100131303A0A0U1RQF7 123 aa7.65□□□□□ -1.18
VARS2-210ENST00000490699 SDHAF1A6NFY7 115 aa7.65□□□□□ -1.18
VARS2-210ENST00000490699 VCYO14598 125 aa7.65□□□□□ -1.18
VARS2-210ENST00000490699 FCER1GP30273 86 aa7.65□□□□□ -1.18
VARS2-210ENST00000490699 CCL18P55774 89 aa7.65□□□□□ -1.18
VARS2-210ENST00000490699 TNP2Q05952 138 aa7.65□□□□□ -1.18
VARS2-210ENST00000490699 COTL1Q14019 142 aa7.65□□□□□ -1.18
VARS2-210ENST00000490699 KIAA1644Q3SXP7 199 aa7.65□□□□□ -1.18
VARS2-210ENST00000490699 UBE2DNLQ8IWF7 75 aa7.65□□□□□ -1.18
VARS2-210ENST00000490699 STAB2Q8WWQ8 2551 aa7.65□□□□□ -1.18
VARS2-210ENST00000490699 A0A096LPF7 62 aa7.64□□□□□ -1.19
VARS2-210ENST00000490699 I3L3M4 83 aa7.64□□□□□ -1.19
VARS2-210ENST00000490699 TRGC2P03986 189 aa7.64□□□□□ -1.19
VARS2-210ENST00000490699 RAB5BP61020 215 aa7.64□□□□□ -1.19
VARS2-210ENST00000490699 UBE2D3P61077 147 aa7.64□□□□□ -1.19
VARS2-210ENST00000490699 UBE2D2P62837 147 aa7.64□□□□□ -1.19
VARS2-210ENST00000490699 PRSS3P2Q8NHM4 247 aa7.64□□□□□ -1.19
VARS2-210ENST00000490699 GTSF1LQ9H1H1 148 aa7.64□□□□□ -1.19
VARS2-210ENST00000490699 NXT2Q9NPJ8 142 aaKnown RBP7.64□□□□□ -1.19
VARS2-210ENST00000490699 TRAV8-6A0A0B4J262 113 aa7.63□□□□□ -1.19
VARS2-210ENST00000490699 LOC389332A0A1B0GUA5 103 aa7.63□□□□□ -1.19
VARS2-210ENST00000490699 C1orf196B1AJZ1 125 aa7.63□□□□□ -1.19
VARS2-210ENST00000490699 NPYP01303 97 aa7.63□□□□□ -1.19
VARS2-210ENST00000490699 G0S2P27469 103 aa7.63□□□□□ -1.19
VARS2-210ENST00000490699 PKIAP61925 76 aa7.63□□□□□ -1.19
VARS2-210ENST00000490699 RPL32P62910 135 aaKnown RBP7.63□□□□□ -1.19
VARS2-210ENST00000490699 SMAGPQ0VAQ4 97 aa7.63□□□□□ -1.19
VARS2-210ENST00000490699 NRACQ8N912 160 aa7.63□□□□□ -1.19
VARS2-210ENST00000490699 ALKBH7Q9BT30 221 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms