RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 AKR1C3P42330 323 aa11.62□□□□□ -0.55
YIPF3-208ENST00000490447 ZNF56Q15929 161 aa11.62□□□□□ -0.55
YIPF3-208ENST00000490447 ATRAIDQ6UW56 229 aa11.62□□□□□ -0.55
YIPF3-208ENST00000490447 CIRBP-AS1Q8TBR5 109 aa11.62□□□□□ -0.55
YIPF3-208ENST00000490447 TRBV6-1A0A0K0K1D8 114 aa11.61□□□□□ -0.55
YIPF3-208ENST00000490447 IFNA1P01562 189 aa11.61□□□□□ -0.55
YIPF3-208ENST00000490447 TAGLN2P37802 199 aaKnown RBP11.61□□□□□ -0.55
YIPF3-208ENST00000490447 MANBALQ9NQG1 85 aa11.61□□□□□ -0.55
YIPF3-208ENST00000490447 TRBV6-8A0A0A6YYG3 113 aa11.6□□□□□ -0.55
YIPF3-208ENST00000490447 A0A1B0GV50 99 aa11.6□□□□□ -0.55
YIPF3-208ENST00000490447 RAB4BP61018 213 aa11.6□□□□□ -0.55
YIPF3-208ENST00000490447 LRP1Q07954 4544 aaKnown RBP11.6□□□□□ -0.55
YIPF3-208ENST00000490447 ANGP03950 147 aaKnown RBP11.6□□□□□ -0.55
YIPF3-208ENST00000490447 PKIAP61925 76 aa11.6□□□□□ -0.55
YIPF3-208ENST00000490447 CCL20P78556 96 aa11.6□□□□□ -0.55
YIPF3-208ENST00000490447 SERTAD4-AS1Q5TG53 156 aa11.6□□□□□ -0.55
YIPF3-208ENST00000490447 C15orf54Q8N8G6 183 aa11.6□□□□□ -0.55
YIPF3-208ENST00000490447 OR10G8Q8NGN5 311 aa11.6□□□□□ -0.55
YIPF3-208ENST00000490447 MED9Q9NWA0 146 aa11.6□□□□□ -0.55
YIPF3-208ENST00000490447 IGLV2-8P01709 118 aa11.59□□□□□ -0.55
YIPF3-208ENST00000490447 CHCHD5Q9BSY4 110 aa11.59□□□□□ -0.55
YIPF3-208ENST00000490447 GNG13Q9P2W3 67 aa11.59□□□□□ -0.55
YIPF3-208ENST00000490447 HLA-DQA1P01909 254 aa11.58□□□□□ -0.56
YIPF3-208ENST00000490447 MPV17L2Q567V2 206 aa11.58□□□□□ -0.56
YIPF3-208ENST00000490447 ENHOQ6UWT2 76 aa11.58□□□□□ -0.56
YIPF3-208ENST00000490447 NEXN-AS1Q8NBZ9 246 aa11.58□□□□□ -0.56
YIPF3-208ENST00000490447 LINC00862A6NCI5 91 aa11.57□□□□□ -0.56
YIPF3-208ENST00000490447 OXTP01178 125 aa11.57□□□□□ -0.56
YIPF3-208ENST00000490447 OR10AG1Q8NH19 301 aa11.57□□□□□ -0.56
YIPF3-208ENST00000490447 FAM210AQ96ND0 272 aa11.57□□□□□ -0.56
YIPF3-208ENST00000490447 FAT3Q8TDW7 4589 aa11.57□□□□□ -0.56
YIPF3-208ENST00000490447 RAB19A4D1S5 217 aa11.56□□□□□ -0.56
YIPF3-208ENST00000490447 F5H697 171 aa11.56□□□□□ -0.56
YIPF3-208ENST00000490447 PAGE4O60829 102 aa11.56□□□□□ -0.56
YIPF3-208ENST00000490447 S100A9P06702 114 aaKnown RBP11.56□□□□□ -0.56
YIPF3-208ENST00000490447 BCL2P10415 239 aa11.56□□□□□ -0.56
YIPF3-208ENST00000490447 RPL19P84098 196 aaKnown RBP11.56□□□□□ -0.56
YIPF3-208ENST00000490447 MIAQ16674 131 aa11.56□□□□□ -0.56
YIPF3-208ENST00000490447 NDUFA5Q16718 116 aa11.56□□□□□ -0.56
YIPF3-208ENST00000490447 SPANXN1Q5VSR9 72 aa11.56□□□□□ -0.56
YIPF3-208ENST00000490447 SMDT1Q9H4I9 107 aa11.56□□□□□ -0.56
YIPF3-208ENST00000490447 VAX2Q9UIW0 290 aa11.56□□□□□ -0.56
YIPF3-208ENST00000490447 USP17L23D6RBM5 183 aa11.55□□□□□ -0.56
YIPF3-208ENST00000490447 CXCL1P09341 107 aa11.55□□□□□ -0.56
YIPF3-208ENST00000490447 KRTAP10-4P60372 401 aaPredicted RBP11.55□□□□□ -0.56
YIPF3-208ENST00000490447 TMEM97Q5BJF2 176 aa11.55□□□□□ -0.56
YIPF3-208ENST00000490447 EIF5A2Q9GZV4 153 aaKnown RBP11.55□□□□□ -0.56
YIPF3-208ENST00000490447 NDUFS6O75380 124 aaKnown RBP11.54□□□□□ -0.56
YIPF3-208ENST00000490447 SMIM17P0DL12 118 aa11.54□□□□□ -0.56
YIPF3-208ENST00000490447 RPL37AP61513 92 aaKnown RBP11.54□□□□□ -0.56
YIPF3-208ENST00000490447 MEF2BQ02080 365 aaPredicted RBP11.54□□□□□ -0.56
YIPF3-208ENST00000490447 PEA15Q15121 130 aa11.54□□□□□ -0.56
YIPF3-208ENST00000490447 PRR27Q6MZM9 219 aa11.54□□□□□ -0.56
YIPF3-208ENST00000490447 HMCN2Q8NDA2 5059 aa11.53□□□□□ -0.56
YIPF3-208ENST00000490447 SSTP61278 116 aa11.53□□□□□ -0.56
YIPF3-208ENST00000490447 BAGE2Q86Y30 109 aa11.53□□□□□ -0.56
YIPF3-208ENST00000490447 MUC21A0A0G2JKD1 596 aa11.52□□□□□ -0.57
YIPF3-208ENST00000490447 MUC21A0A140T8X8 626 aa11.52□□□□□ -0.57
YIPF3-208ENST00000490447 SCO2A0A1W2PP80 73 aa11.52□□□□□ -0.57
YIPF3-208ENST00000490447 SNAI2O43623 268 aa11.52□□□□□ -0.57
YIPF3-208ENST00000490447 PDE6DO43924 150 aa11.52□□□□□ -0.57
YIPF3-208ENST00000490447 OR5AL1P0C617 328 aa11.52□□□□□ -0.57
YIPF3-208ENST00000490447 DGAT2L7PQ6IED9 249 aa11.52□□□□□ -0.57
YIPF3-208ENST00000490447 UQCC3Q6UW78 93 aa11.52□□□□□ -0.57
YIPF3-208ENST00000490447 COMMD7Q86VX2 200 aa11.52□□□□□ -0.57
YIPF3-208ENST00000490447 DERL1Q9BUN8 251 aa11.52□□□□□ -0.57
YIPF3-208ENST00000490447 TRBV25-1A0A075B6N4 114 aa11.51□□□□□ -0.57
YIPF3-208ENST00000490447 CLPSL2Q6UWE3 100 aa11.51□□□□□ -0.57
YIPF3-208ENST00000490447 AP1S3Q96PC3 154 aa11.51□□□□□ -0.57
YIPF3-208ENST00000490447 SSBP4Q9BWG4 385 aaPredicted RBP11.51□□□□□ -0.57
YIPF3-208ENST00000490447 PRSS1P07477 247 aa11.5□□□□□ -0.57
YIPF3-208ENST00000490447 GAGE6Q13070 117 aa11.5□□□□□ -0.57
YIPF3-208ENST00000490447 MLST8Q9BVC4 326 aa11.5□□□□□ -0.57
YIPF3-208ENST00000490447 TMEM250H0YL14 139 aa11.49□□□□□ -0.57
YIPF3-208ENST00000490447 RBX1P62877 108 aa11.49□□□□□ -0.57
YIPF3-208ENST00000490447 NTM-AS1Q6ZSK4 140 aa11.49□□□□□ -0.57
YIPF3-208ENST00000490447 LINC00269Q8N2A0 174 aa11.49□□□□□ -0.57
YIPF3-208ENST00000490447 PKHD1L1Q86WI1 4243 aa11.48□□□□□ -0.57
YIPF3-208ENST00000490447 C9orf163Q8N9P6 203 aa11.48□□□□□ -0.57
YIPF3-208ENST00000490447 PRR34Q9NV39 138 aa11.48□□□□□ -0.57
YIPF3-208ENST00000490447 TPPP3Q9BW30 176 aa11.47□□□□□ -0.57
YIPF3-208ENST00000490447 PLA2G2DQ9UNK4 145 aa11.47□□□□□ -0.57
YIPF3-208ENST00000490447 IGHV1-24A0A0C4DH33 117 aa11.46□□□□□ -0.57
YIPF3-208ENST00000490447 H7C1H1 209 aa11.46□□□□□ -0.57
YIPF3-208ENST00000490447 MGPP08493 103 aa11.46□□□□□ -0.57
YIPF3-208ENST00000490447 SRP19P09132 144 aaKnown RBP11.46□□□□□ -0.57
YIPF3-208ENST00000490447 SRSF3P84103 164 aaKnown RBP11.46□□□□□ -0.57
YIPF3-208ENST00000490447 CLRN3Q8NCR9 226 aa11.46□□□□□ -0.57
YIPF3-208ENST00000490447 C11orf52Q96A22 123 aa11.46□□□□□ -0.57
YIPF3-208ENST00000490447 RPL35P42766 123 aaKnown RBP11.45□□□□□ -0.58
YIPF3-208ENST00000490447 REG3AQ06141 175 aa11.45□□□□□ -0.58
YIPF3-208ENST00000490447 IQCJQ1A5X6 159 aa11.45□□□□□ -0.58
YIPF3-208ENST00000490447 KIF25-AS1Q9Y6Z4 181 aa11.45□□□□□ -0.58
YIPF3-208ENST00000490447 IGLV10-54A0A075B6I4 117 aa11.44□□□□□ -0.58
YIPF3-208ENST00000490447 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.44□□□□□ -0.58
YIPF3-208ENST00000490447 UBR4Q5T4S7 5183 aa11.43□□□□□ -0.58
YIPF3-208ENST00000490447 FAM74A3Q4VXF1 159 aa11.43□□□□□ -0.58
YIPF3-208ENST00000490447 SLC7A5P1Q8MH63 180 aa11.43□□□□□ -0.58
YIPF3-208ENST00000490447 DAZAP1Q96EP5 407 aaKnown RBP11.43□□□□□ -0.58
YIPF3-208ENST00000490447 hDV102S1A0JD36 115 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms