RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 NDUFAF3Q9BU61 184 aa3.23□□□□□ -1.89
RBM39-235ENST00000490354 TMEM191AQ9H0A3 160 aa3.23□□□□□ -1.89
RBM39-235ENST00000490354 MGAM2Q2M2H8 2515 aa3.23□□□□□ -1.89
RBM39-235ENST00000490354 DNAH3Q8TD57 4116 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 A0A0A0MQY5 61 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 SMIM9A6NGZ8 99 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 M0R2P5 195 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 M0R381 172 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 HIST1H2BKO60814 126 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 PRM2P04554 102 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 S100A6P06703 90 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 HIST1H2BJP06899 126 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 TRGC1P0CF51 173 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 AZU1P20160 251 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 HIST1H2BOP23527 126 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 HIST1H2BBP33778 126 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 AKR1D1P51857 326 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 HIST1H2BDP58876 126 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 SSTP61278 116 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 SNRPEP62304 92 aaKnown RBP3.22□□□□□ -1.89
RBM39-235ENST00000490354 HIST1H2BCP62807 126 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 ZNF415Q09FC8 603 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 DAZ2Q13117 558 aaKnown RBP3.22□□□□□ -1.89
RBM39-235ENST00000490354 SLAQ13239 276 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 HIST2H2BEQ16778 126 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 RRN3P1Q2M238 152 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 LGALS9BQ3B8N2 356 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 ZNF876PQ49A33 203 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.22□□□□□ -1.89
RBM39-235ENST00000490354 SMIM15Q7Z3B0 74 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 POM121L12Q8N7R1 296 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 RNASE8Q8TDE3 154 aaKnown RBP3.22□□□□□ -1.89
RBM39-235ENST00000490354 TMEM263Q8WUH6 116 aaKnown RBP3.22□□□□□ -1.89
RBM39-235ENST00000490354 RASL10AQ92737 203 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 HIST1H2BHQ93079 126 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 C16orf74Q96GX8 76 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 RCHY1Q96PM5 261 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 HIST1H2BNQ99877 126 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 HIST1H2BMQ99879 126 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 OVOL2Q9BRP0 275 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 GSN-AS1Q9NRJ2 163 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 TIMM8BQ9Y5J9 83 aaPredicted RBP3.22□□□□□ -1.89
RBM39-235ENST00000490354 U3KQK5 164 aa3.22□□□□□ -1.89
RBM39-235ENST00000490354 IGHV3OR16-12A0A075B7B8 117 aa3.21□□□□□ -1.9
RBM39-235ENST00000490354 A8MWV9 139 aa3.21□□□□□ -1.9
RBM39-235ENST00000490354 PPBPP02775 128 aa3.21□□□□□ -1.9
RBM39-235ENST00000490354 RAB4AP20338 218 aa3.21□□□□□ -1.9
RBM39-235ENST00000490354 EVI2AP22794 236 aa3.21□□□□□ -1.9
RBM39-235ENST00000490354 LINC00315P59091 139 aa3.21□□□□□ -1.9
RBM39-235ENST00000490354 Q0VG73 95 aa3.21□□□□□ -1.9
RBM39-235ENST00000490354 MRPL51Q4U2R6 128 aaKnown RBP3.21□□□□□ -1.9
RBM39-235ENST00000490354 COA6Q5JTJ3 125 aaKnown RBP3.21□□□□□ -1.9
RBM39-235ENST00000490354 AMN1Q8IY45 258 aa3.21□□□□□ -1.9
RBM39-235ENST00000490354 C14orf178Q8N769 122 aaPredicted RBP3.21□□□□□ -1.9
RBM39-235ENST00000490354 TMEM18Q96B42 140 aa3.21□□□□□ -1.9
RBM39-235ENST00000490354 RNF183Q96D59 192 aa3.21□□□□□ -1.9
RBM39-235ENST00000490354 RNF185Q96GF1 192 aa3.21□□□□□ -1.9
RBM39-235ENST00000490354 AP1S3Q96PC3 154 aa3.21□□□□□ -1.9
RBM39-235ENST00000490354 ALKBH7Q9BT30 221 aaPredicted RBP3.21□□□□□ -1.9
RBM39-235ENST00000490354 TP53TG1Q9Y2A0 90 aa3.21□□□□□ -1.9
RBM39-235ENST00000490354 KIF25-AS1Q9Y6Z4 181 aa3.21□□□□□ -1.9
RBM39-235ENST00000490354 PLAC8L1A1L4L8 177 aa3.2□□□□□ -1.9
RBM39-235ENST00000490354 LINC00587B1AMM8 73 aa3.2□□□□□ -1.9
RBM39-235ENST00000490354 RS1O15537 224 aa3.2□□□□□ -1.9
RBM39-235ENST00000490354 CRYGDP07320 174 aa3.2□□□□□ -1.9
RBM39-235ENST00000490354 SMIM17P0DL12 118 aa3.2□□□□□ -1.9
RBM39-235ENST00000490354 MIFP14174 115 aa3.2□□□□□ -1.9
RBM39-235ENST00000490354 SRIP30626 198 aa3.2□□□□□ -1.9
RBM39-235ENST00000490354 CKS2P33552 79 aa3.2□□□□□ -1.9
RBM39-235ENST00000490354 KIAA1644Q3SXP7 199 aa3.2□□□□□ -1.9
RBM39-235ENST00000490354 OR10J3Q5JRS4 329 aa3.2□□□□□ -1.9
RBM39-235ENST00000490354 UFSP1Q6NVU6 142 aa3.2□□□□□ -1.9
RBM39-235ENST00000490354 ZFP2Q6ZN57 461 aa3.2□□□□□ -1.9
RBM39-235ENST00000490354 ORMDL3Q8N138 153 aa3.2□□□□□ -1.9
RBM39-235ENST00000490354 OR11H2Q8NH07 326 aa3.2□□□□□ -1.9
RBM39-235ENST00000490354 MRAP2Q96G30 205 aa3.2□□□□□ -1.9
RBM39-235ENST00000490354 SAMD10Q9BYL1 202 aa3.2□□□□□ -1.9
RBM39-235ENST00000490354 DPH3P1Q9H4G8 78 aa3.2□□□□□ -1.9
RBM39-235ENST00000490354 LAMTOR2Q9Y2Q5 125 aa3.2□□□□□ -1.9
RBM39-235ENST00000490354 HUWE1Q7Z6Z7 4374 aaKnown RBP3.2□□□□□ -1.9
RBM39-235ENST00000490354 DNAH9Q9NYC9 4486 aa3.2□□□□□ -1.9
RBM39-235ENST00000490354 PKD1L1Q8TDX9 2849 aa3.2□□□□□ -1.9
RBM39-235ENST00000490354 TRGV1A0A0A0MS02 117 aa3.19□□□□□ -1.9
RBM39-235ENST00000490354 D6R8Y8 96 aa3.19□□□□□ -1.9
RBM39-235ENST00000490354 CIDEAO60543 219 aa3.19□□□□□ -1.9
RBM39-235ENST00000490354 PPP1R17O96001 155 aa3.19□□□□□ -1.9
RBM39-235ENST00000490354 ESDP10768 282 aa3.19□□□□□ -1.9
RBM39-235ENST00000490354 NDUFA6P56556 154 aa3.19□□□□□ -1.9
RBM39-235ENST00000490354 DEFB135Q30KP9 77 aa3.19□□□□□ -1.9
RBM39-235ENST00000490354 LBHQ53QV2 105 aaPredicted RBP3.19□□□□□ -1.9
RBM39-235ENST00000490354 CFAP126Q5VTH2 177 aa3.19□□□□□ -1.9
RBM39-235ENST00000490354 BAGE3Q86Y29 109 aa3.19□□□□□ -1.9
RBM39-235ENST00000490354 KRTAP7-1Q8IUC3 87 aa3.19□□□□□ -1.9
RBM39-235ENST00000490354 LINC00612Q8N6U2 182 aa3.19□□□□□ -1.9
RBM39-235ENST00000490354 C18orf32Q8TCD1 76 aa3.19□□□□□ -1.9
RBM39-235ENST00000490354 PRELID3AQ96N28 172 aa3.19□□□□□ -1.9
RBM39-235ENST00000490354 C18orf15Q96N68 181 aa3.19□□□□□ -1.9
RBM39-235ENST00000490354 C20orf78Q9BR46 151 aa3.19□□□□□ -1.9
RBM39-235ENST00000490354 KRTAP4-3Q9BYR4 195 aa3.19□□□□□ -1.9
RBM39-235ENST00000490354 JPT2Q9H910 190 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms