RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 C16orf74Q96GX8 76 aa8.5□□□□□ -1.05
TRIM40-208ENST00000489892 C9orf85Q96MD7 179 aa8.5□□□□□ -1.05
TRIM40-208ENST00000489892 GNRH2O43555 120 aa8.49□□□□□ -1.05
TRIM40-208ENST00000489892 SMIM17P0DL12 118 aa8.49□□□□□ -1.05
TRIM40-208ENST00000489892 IGHV4-30-4P0DP06 118 aa8.49□□□□□ -1.05
TRIM40-208ENST00000489892 RRN3P1Q2M238 152 aa8.49□□□□□ -1.05
TRIM40-208ENST00000489892 BVES-AS1Q5T3Y7 98 aa8.49□□□□□ -1.05
TRIM40-208ENST00000489892 ZNF575Q86XF7 245 aa8.49□□□□□ -1.05
TRIM40-208ENST00000489892 BOD1L2Q8IYS8 172 aa8.49□□□□□ -1.05
TRIM40-208ENST00000489892 DPH3P1Q9H4G8 78 aa8.49□□□□□ -1.05
TRIM40-208ENST00000489892 TIMM8BQ9Y5J9 83 aaPredicted RBP8.49□□□□□ -1.05
TRIM40-208ENST00000489892 A6NDN8 102 aa8.48□□□□□ -1.05
TRIM40-208ENST00000489892 H0Y8G0 127 aa8.48□□□□□ -1.05
TRIM40-208ENST00000489892 M0R2P5 195 aa8.48□□□□□ -1.05
TRIM40-208ENST00000489892 NCR2O95944 276 aa8.48□□□□□ -1.05
TRIM40-208ENST00000489892 GIG44P09565 113 aaPredicted RBP8.48□□□□□ -1.05
TRIM40-208ENST00000489892 RBMY1A1P0DJD3 496 aaKnown RBP8.48□□□□□ -1.05
TRIM40-208ENST00000489892 RBMY1CP0DJD4 496 aa8.48□□□□□ -1.05
TRIM40-208ENST00000489892 HTN1P15515 57 aa8.48□□□□□ -1.05
TRIM40-208ENST00000489892 HSD52Q0P140 79 aa8.48□□□□□ -1.05
TRIM40-208ENST00000489892 RBMY1FQ15415 496 aaKnown RBP8.48□□□□□ -1.05
TRIM40-208ENST00000489892 ORMDL2Q53FV1 153 aa8.48□□□□□ -1.05
TRIM40-208ENST00000489892 Q6ZQT7 251 aa8.48□□□□□ -1.05
TRIM40-208ENST00000489892 C1orf158Q8N1D5 194 aa8.48□□□□□ -1.05
TRIM40-208ENST00000489892 C20orf78Q9BR46 151 aa8.48□□□□□ -1.05
TRIM40-208ENST00000489892 ZMAT4Q9H898 229 aa8.48□□□□□ -1.05
TRIM40-208ENST00000489892 IGLV2-18A0A075B6J9 118 aa8.47□□□□□ -1.05
TRIM40-208ENST00000489892 IGHV3OR16-12A0A075B7B8 117 aa8.47□□□□□ -1.05
TRIM40-208ENST00000489892 NUDT3O95989 172 aa8.47□□□□□ -1.05
TRIM40-208ENST00000489892 UBE2V1Q13404 147 aa8.47□□□□□ -1.05
TRIM40-208ENST00000489892 LAGE3Q14657 143 aa8.47□□□□□ -1.05
TRIM40-208ENST00000489892 MPV17L2Q567V2 206 aa8.47□□□□□ -1.05
TRIM40-208ENST00000489892 KPRPQ5T749 579 aaPredicted RBP8.47□□□□□ -1.05
TRIM40-208ENST00000489892 CSNK1G2-AS1Q8NCQ2 148 aa8.47□□□□□ -1.05
TRIM40-208ENST00000489892 TRAV12-1A0A0B4J245 112 aa8.46□□□□□ -1.06
TRIM40-208ENST00000489892 A8MWV9 139 aa8.46□□□□□ -1.06
TRIM40-208ENST00000489892 G3V4G9 280 aa8.46□□□□□ -1.06
TRIM40-208ENST00000489892 SMKR1H3BMG3 65 aa8.46□□□□□ -1.06
TRIM40-208ENST00000489892 EVI2AP22794 236 aa8.46□□□□□ -1.06
TRIM40-208ENST00000489892 KRTAP10-11P60412 298 aa8.46□□□□□ -1.06
TRIM40-208ENST00000489892 RPL32P62910 135 aaKnown RBP8.46□□□□□ -1.06
TRIM40-208ENST00000489892 ZNF876PQ49A33 203 aa8.46□□□□□ -1.06
TRIM40-208ENST00000489892 NRACQ8N912 160 aa8.46□□□□□ -1.06
TRIM40-208ENST00000489892 RNASE8Q8TDE3 154 aaKnown RBP8.46□□□□□ -1.06
TRIM40-208ENST00000489892 SMIM2Q9BVW6 85 aa8.46□□□□□ -1.06
TRIM40-208ENST00000489892 MSRB1Q9NZV6 116 aa8.46□□□□□ -1.06
TRIM40-208ENST00000489892 MDFICQ9P1T7 246 aa8.46□□□□□ -1.06
TRIM40-208ENST00000489892 HIGD1BQ9P298 99 aa8.46□□□□□ -1.06
TRIM40-208ENST00000489892 TP53TG1Q9Y2A0 90 aa8.46□□□□□ -1.06
TRIM40-208ENST00000489892 RHODO00212 210 aa8.45□□□□□ -1.06
TRIM40-208ENST00000489892 CIDEAO60543 219 aa8.45□□□□□ -1.06
TRIM40-208ENST00000489892 DPM2O94777 84 aa8.45□□□□□ -1.06
TRIM40-208ENST00000489892 IGKCP01834 107 aa8.45□□□□□ -1.06
TRIM40-208ENST00000489892 NPSP0C0P6 89 aa8.45□□□□□ -1.06
TRIM40-208ENST00000489892 FGF6P10767 208 aa8.45□□□□□ -1.06
TRIM40-208ENST00000489892 PTTG1IPP53801 180 aa8.45□□□□□ -1.06
TRIM40-208ENST00000489892 DAZ2Q13117 558 aaKnown RBP8.45□□□□□ -1.06
TRIM40-208ENST00000489892 TMEM97Q5BJF2 176 aa8.45□□□□□ -1.06
TRIM40-208ENST00000489892 C2orf91Q6ZV80 131 aa8.45□□□□□ -1.06
TRIM40-208ENST00000489892 C11orf72Q8NBR9 251 aa8.45□□□□□ -1.06
TRIM40-208ENST00000489892 MUC21A0A0G2JKD1 596 aa8.44□□□□□ -1.06
TRIM40-208ENST00000489892 MUC21A0A140T8X8 626 aa8.44□□□□□ -1.06
TRIM40-208ENST00000489892 MIFP14174 115 aa8.44□□□□□ -1.06
TRIM40-208ENST00000489892 PLNP26678 52 aa8.44□□□□□ -1.06
TRIM40-208ENST00000489892 ODF1Q14990 250 aa8.44□□□□□ -1.06
TRIM40-208ENST00000489892 ANKRD39Q53RE8 183 aa8.44□□□□□ -1.06
TRIM40-208ENST00000489892 POM121L12Q8N7R1 296 aa8.44□□□□□ -1.06
TRIM40-208ENST00000489892 TEX48A0A1B0GUV7 120 aa8.43□□□□□ -1.06
TRIM40-208ENST00000489892 TAX1BP3O14907 124 aa8.43□□□□□ -1.06
TRIM40-208ENST00000489892 PRSS1P07477 247 aa8.43□□□□□ -1.06
TRIM40-208ENST00000489892 RASL10AQ92737 203 aa8.43□□□□□ -1.06
TRIM40-208ENST00000489892 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.42□□□□□ -1.06
TRIM40-208ENST00000489892 H3BRM9 83 aa8.42□□□□□ -1.06
TRIM40-208ENST00000489892 H7C1H1 209 aa8.42□□□□□ -1.06
TRIM40-208ENST00000489892 SPRY2O43597 315 aa8.42□□□□□ -1.06
TRIM40-208ENST00000489892 SUMO2P61956 95 aaKnown RBP8.42□□□□□ -1.06
TRIM40-208ENST00000489892 TAL2Q16559 108 aa8.42□□□□□ -1.06
TRIM40-208ENST00000489892 DEFB135Q30KP9 77 aa8.42□□□□□ -1.06
TRIM40-208ENST00000489892 IL17DQ8TAD2 202 aa8.42□□□□□ -1.06
TRIM40-208ENST00000489892 RNF183Q96D59 192 aa8.42□□□□□ -1.06
TRIM40-208ENST00000489892 A0A087WX48 190 aa8.41□□□□□ -1.06
TRIM40-208ENST00000489892 PRB2P02812 416 aaPredicted RBP8.41□□□□□ -1.06
TRIM40-208ENST00000489892 VAMP3Q15836 100 aa8.41□□□□□ -1.06
TRIM40-208ENST00000489892 C14orf178Q8N769 122 aaPredicted RBP8.41□□□□□ -1.06
TRIM40-208ENST00000489892 OR11H2Q8NH07 326 aa8.41□□□□□ -1.06
TRIM40-208ENST00000489892 TOMM6Q96B49 74 aa8.41□□□□□ -1.06
TRIM40-208ENST00000489892 OVOL2Q9BRP0 275 aa8.41□□□□□ -1.06
TRIM40-208ENST00000489892 TRGV1A0A0A0MS02 117 aa8.4□□□□□ -1.06
TRIM40-208ENST00000489892 LYRM9A8MSI8 78 aa8.4□□□□□ -1.06
TRIM40-208ENST00000489892 MGPP08493 103 aa8.4□□□□□ -1.06
TRIM40-208ENST00000489892 AZU1P20160 251 aa8.4□□□□□ -1.06
TRIM40-208ENST00000489892 PAPPA-AS1Q5QFB9 102 aa8.4□□□□□ -1.06
TRIM40-208ENST00000489892 ZFP2Q6ZN57 461 aa8.4□□□□□ -1.06
TRIM40-208ENST00000489892 OR4C5Q8NGB2 326 aa8.4□□□□□ -1.06
TRIM40-208ENST00000489892 MRAPQ8TCY5 172 aa8.4□□□□□ -1.06
TRIM40-208ENST00000489892 C18orf15Q96N68 181 aa8.4□□□□□ -1.06
TRIM40-208ENST00000489892 MUC4Q99102 2169 aa8.39□□□□□ -1.07
TRIM40-208ENST00000489892 F5H697 171 aa8.39□□□□□ -1.07
TRIM40-208ENST00000489892 F8VRH5 84 aa8.39□□□□□ -1.07
TRIM40-208ENST00000489892 K7EP13 123 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms