RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 WFDC2Q14508 124 aa0.47□□□□□ -2.33
CCDC39-206ENST00000489868 PMCHL1Q16048 86 aa0.47□□□□□ -2.33
CCDC39-206ENST00000489868 MPV17LQ2QL34 196 aa0.47□□□□□ -2.33
CCDC39-206ENST00000489868 DEFB113Q30KQ7 82 aa0.47□□□□□ -2.33
CCDC39-206ENST00000489868 ETDBQ3ZM63 59 aa0.47□□□□□ -2.33
CCDC39-206ENST00000489868 C9orf116Q5BN46 136 aaPredicted RBP0.47□□□□□ -2.33
CCDC39-206ENST00000489868 C2orf82Q6UX34 121 aa0.47□□□□□ -2.33
CCDC39-206ENST00000489868 HEPN1Q6WQI6 88 aa0.47□□□□□ -2.33
CCDC39-206ENST00000489868 ZCCHC23Q6ZST2 131 aa0.47□□□□□ -2.33
CCDC39-206ENST00000489868 CYP2G1PQ6ZSU1 146 aa0.47□□□□□ -2.33
CCDC39-206ENST00000489868 ZNF826PQ6ZT77 177 aa0.47□□□□□ -2.33
CCDC39-206ENST00000489868 CLECL1Q8IZS7 167 aa0.47□□□□□ -2.33
CCDC39-206ENST00000489868 Q8TAT8 98 aa0.47□□□□□ -2.33
CCDC39-206ENST00000489868 C18orf32Q8TCD1 76 aa0.47□□□□□ -2.33
CCDC39-206ENST00000489868 TRGV9Q99603 122 aa0.47□□□□□ -2.33
CCDC39-206ENST00000489868 MANBALQ9NQG1 85 aa0.47□□□□□ -2.33
CCDC39-206ENST00000489868 LINC00474Q9P2X8 69 aa0.47□□□□□ -2.33
CCDC39-206ENST00000489868 ABCC3O15438 1527 aa0.47□□□□□ -2.33
CCDC39-206ENST00000489868 LAMA4Q16363 1823 aa0.47□□□□□ -2.33
CCDC39-206ENST00000489868 TAF1LQ8IZX4 1826 aa0.47□□□□□ -2.33
CCDC39-206ENST00000489868 SPEF2Q9C093 1822 aa0.47□□□□□ -2.33
CCDC39-206ENST00000489868 FANCAO15360 1455 aa0.47□□□□□ -2.33
CCDC39-206ENST00000489868 EDC4Q6P2E9 1401 aaKnown RBP0.47□□□□□ -2.33
CCDC39-206ENST00000489868 ANKARQ7Z5J8 1434 aa0.47□□□□□ -2.33
CCDC39-206ENST00000489868 KDM5AP29375 1690 aaKnown RBP0.46□□□□□ -2.34
CCDC39-206ENST00000489868 ADGBQ8N7X0 1667 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 QRICH2Q9H0J4 1663 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 TRPM1Q7Z4N2 1603 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 A0A087WSZ3 146 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 A0A087WWC5 75 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 A0A087WXM4 84 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 TRBV7-1A0A0A6YYK4 115 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 TRAV12-3A0A0B4J271 114 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 TRAV22A0A0B4J277 110 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 A0A0G2JND7 137 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 TEX49A0A1B0GTD5 131 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 TMEM30CPA0ZSE6 113 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 C7orf77A4D0Y5 90 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 F2Z2F3 143 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 CHKB-CPT1BH3BT56 60 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 H7BZZ5 65 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 ACYP1P07311 99 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 SFTA3P0C7M3 94 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 SMIM13P0DJ93 91 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 EDDM3BP56851 147 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 SMIM11AP58511 58 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 UBE2D3P61077 147 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 SNRPFP62306 86 aaKnown RBP0.46□□□□□ -2.34
CCDC39-206ENST00000489868 UBE2D2P62837 147 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 NMSQ5H8A3 153 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 C10orf128Q5T292 105 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 CSAG1Q6PB30 78 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 SFTA2Q6UW10 78 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 LYPD5Q6UWN5 251 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 ZNF833PQ6ZTB9 187 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 Q8N6K4 173 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 CYP4F30PQ9H0H9 118 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 CDC42SE1Q9NRR8 79 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 HIGD1BQ9P298 99 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 EPRSP07814 1512 aaKnown RBP0.46□□□□□ -2.34
CCDC39-206ENST00000489868 PRDM15P57071 1507 aaPredicted RBP0.46□□□□□ -2.34
CCDC39-206ENST00000489868 MAGI3Q5TCQ9 1506 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 ABCA10Q8WWZ4 1543 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 MUC5ACP98088 5654 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 ATP10BO94823 1461 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 NCOA2Q15596 1464 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 CDK12Q9NYV4 1490 aaPredicted RBP0.46□□□□□ -2.34
CCDC39-206ENST00000489868 MLH3Q9UHC1 1453 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 BLMP54132 1417 aaPredicted RBP0.46□□□□□ -2.34
CCDC39-206ENST00000489868 MDN1Q9NU22 5596 aa0.46□□□□□ -2.34
CCDC39-206ENST00000489868 ADAMTS12P58397 1594 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 MAST2Q6P0Q8 1798 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 RBBP6Q7Z6E9 1792 aaKnown RBP0.45□□□□□ -2.34
CCDC39-206ENST00000489868 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.45□□□□□ -2.34
CCDC39-206ENST00000489868 DUOX2Q9NRD8 1548 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 ARHGEF12Q9NZN5 1544 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 SPHKAPQ2M3C7 1700 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 MARF1Q9Y4F3 1742 aaKnown RBP0.45□□□□□ -2.34
CCDC39-206ENST00000489868 TRBV7-3A0A075B6L6 115 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 TRBV25-1A0A075B6N4 114 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 TRAV23DV6A0A075B6W5 121 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 TRBV10-1A0A0K0K1A3 114 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 CXorf51AA0A1B0GTR3 108 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 C2orf70A6NJV1 201 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 ZNF815PA8K554 130 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 BCE1O60756 84 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 IGHV3-33P01772 117 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 COX6CP09669 75 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 EFNA4P52798 201 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 KLKP1Q107X0 134 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 PDE6HQ13956 83 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 ZNF56Q15929 161 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 PSMG4Q5JS54 123 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 TMEM170BQ5T4T1 132 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 CFAP126Q5VTH2 177 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 Q5VV11 94 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 ZNF818PQ6ZRF7 136 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 C6orf201Q7Z4U5 140 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 VMO1Q7Z5L0 202 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 LINC00643Q86TS7 51 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms