RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 P01737 135 aa10.07□□□□□ -0.8
USP48-210ENST00000489108 SRSF9Q13242 221 aaKnown RBP eCLIP10.07□□□□□ -0.8
USP48-210ENST00000489108 FAM162BQ5T6X4 162 aa10.07□□□□□ -0.8
USP48-210ENST00000489108 STPG4Q8N801 248 aa10.07□□□□□ -0.8
USP48-210ENST00000489108 VAX2Q9UIW0 290 aa10.07□□□□□ -0.8
USP48-210ENST00000489108 TRBV25-1A0A075B6N4 114 aa10.06□□□□□ -0.8
USP48-210ENST00000489108 A0A1W2PRE2 83 aa10.06□□□□□ -0.8
USP48-210ENST00000489108 C20orf203Q8NBC4 194 aa10.06□□□□□ -0.8
USP48-210ENST00000489108 F5H697 171 aa10.05□□□□□ -0.8
USP48-210ENST00000489108 PEX7O00628 323 aa10.05□□□□□ -0.8
USP48-210ENST00000489108 NDUFS6O75380 124 aaKnown RBP10.05□□□□□ -0.8
USP48-210ENST00000489108 LINC01559Q495D7 138 aa10.05□□□□□ -0.8
USP48-210ENST00000489108 MZT2BQ6NZ67 158 aa10.05□□□□□ -0.8
USP48-210ENST00000489108 COX8CQ7Z4L0 72 aa10.05□□□□□ -0.8
USP48-210ENST00000489108 PET100P0DJ07 73 aa10.04□□□□□ -0.8
USP48-210ENST00000489108 RPS10P46783 165 aaKnown RBP10.04□□□□□ -0.8
USP48-210ENST00000489108 IQCJQ1A5X6 159 aa10.04□□□□□ -0.8
USP48-210ENST00000489108 ZNF674Q2M3X9 581 aa10.04□□□□□ -0.8
USP48-210ENST00000489108 GFRA4Q9GZZ7 299 aa10.04□□□□□ -0.8
USP48-210ENST00000489108 ZFP30Q9Y2G7 519 aa10.04□□□□□ -0.8
USP48-210ENST00000489108 IGLV4-60A0A075B6I1 120 aa10.03□□□□□ -0.8
USP48-210ENST00000489108 GZMBP10144 247 aa10.03□□□□□ -0.8
USP48-210ENST00000489108 ATP6V0CP27449 155 aa10.03□□□□□ -0.8
USP48-210ENST00000489108 UBE2G2P60604 165 aa10.03□□□□□ -0.8
USP48-210ENST00000489108 C15orf56Q8N910 161 aa10.03□□□□□ -0.8
USP48-210ENST00000489108 OR10AG1Q8NH19 301 aa10.03□□□□□ -0.8
USP48-210ENST00000489108 CCDC32Q9BV29 185 aa10.03□□□□□ -0.8
USP48-210ENST00000489108 IGHV1-24A0A0C4DH33 117 aa10.02□□□□□ -0.81
USP48-210ENST00000489108 ACTR3CQ9C0K3 210 aaPredicted RBP10.02□□□□□ -0.81
USP48-210ENST00000489108 MUC21A0A140T8X8 626 aa10.01□□□□□ -0.81
USP48-210ENST00000489108 MBP02144 154 aa10.01□□□□□ -0.81
USP48-210ENST00000489108 HIGD2BQ4VC39 106 aa10.01□□□□□ -0.81
USP48-210ENST00000489108 HIST1H2BAQ96A08 127 aa10.01□□□□□ -0.81
USP48-210ENST00000489108 PSMG3Q9BT73 122 aaPredicted RBP10.01□□□□□ -0.81
USP48-210ENST00000489108 ZNF471Q9BX82 626 aaPredicted RBP10.01□□□□□ -0.81
USP48-210ENST00000489108 MUC2Q02817 5179 aa10.01□□□□□ -0.81
USP48-210ENST00000489108 A0A096LNI7 61 aa10□□□□□ -0.81
USP48-210ENST00000489108 A0A1B0GUV1 79 aa10□□□□□ -0.81
USP48-210ENST00000489108 A6NHS1 94 aa10□□□□□ -0.81
USP48-210ENST00000489108 H7C1H1 209 aa10□□□□□ -0.81
USP48-210ENST00000489108 DEFA3P59666 94 aa10□□□□□ -0.81
USP48-210ENST00000489108 SSTP61278 116 aa10□□□□□ -0.81
USP48-210ENST00000489108 CFAP161Q6P656 301 aa10□□□□□ -0.81
USP48-210ENST00000489108 KRTAP9-6A0A140TA67 174 aa9.99□□□□□ -0.81
USP48-210ENST00000489108 SERF2P84101 59 aa9.99□□□□□ -0.81
USP48-210ENST00000489108 Q6ZRP5 223 aa9.99□□□□□ -0.81
USP48-210ENST00000489108 ENKURQ8TC29 256 aa9.99□□□□□ -0.81
USP48-210ENST00000489108 AQP10Q96PS8 301 aa9.99□□□□□ -0.81
USP48-210ENST00000489108 GAGE12HA6NDE8 117 aa9.98□□□□□ -0.81
USP48-210ENST00000489108 FAM74A7A6NL05 159 aa9.98□□□□□ -0.81
USP48-210ENST00000489108 INMT-MINDY4F8WBC2 141 aa9.98□□□□□ -0.81
USP48-210ENST00000489108 UBE2G1P62253 170 aa9.98□□□□□ -0.81
USP48-210ENST00000489108 INO80EQ8NBZ0 244 aaPredicted RBP9.98□□□□□ -0.81
USP48-210ENST00000489108 FMC1Q96HJ9 113 aa9.98□□□□□ -0.81
USP48-210ENST00000489108 TNFSF18Q9UNG2 199 aa9.98□□□□□ -0.81
USP48-210ENST00000489108 ZNF726P1Q15940 193 aa9.97□□□□□ -0.81
USP48-210ENST00000489108 SPANXN1Q5VSR9 72 aa9.97□□□□□ -0.81
USP48-210ENST00000489108 TMEM243Q9BU79 118 aa9.97□□□□□ -0.81
USP48-210ENST00000489108 NKX6-2Q9C056 277 aaPredicted RBP9.97□□□□□ -0.81
USP48-210ENST00000489108 SSNA1O43805 119 aa9.96□□□□□ -0.82
USP48-210ENST00000489108 LTAP01374 205 aa9.96□□□□□ -0.82
USP48-210ENST00000489108 SULT1A2P50226 295 aa9.96□□□□□ -0.82
USP48-210ENST00000489108 SSBP4Q9BWG4 385 aaPredicted RBP9.96□□□□□ -0.82
USP48-210ENST00000489108 FAM231BA6NCW3 169 aa9.95□□□□□ -0.82
USP48-210ENST00000489108 SNAI2O43623 268 aa9.95□□□□□ -0.82
USP48-210ENST00000489108 SMIM17P0DL12 118 aa9.95□□□□□ -0.82
USP48-210ENST00000489108 IGKV3OR2-268A0A0C4DH90 116 aa9.94□□□□□ -0.82
USP48-210ENST00000489108 M0QY20 66 aa9.94□□□□□ -0.82
USP48-210ENST00000489108 LINC00474Q9P2X8 69 aa9.94□□□□□ -0.82
USP48-210ENST00000489108 CTXND1A0A1B0GTU2 59 aa9.93□□□□□ -0.82
USP48-210ENST00000489108 CXCL1P09341 107 aa9.93□□□□□ -0.82
USP48-210ENST00000489108 OR5AL1P0C617 328 aa9.93□□□□□ -0.82
USP48-210ENST00000489108 NKX2-5P52952 324 aaPredicted RBP9.92□□□□□ -0.82
USP48-210ENST00000489108 GVQW2A0A096LPI5 108 aaPredicted RBP9.91□□□□□ -0.82
USP48-210ENST00000489108 A0A0U1RQV1 116 aa9.91□□□□□ -0.82
USP48-210ENST00000489108 UBE2L6O14933 153 aa9.91□□□□□ -0.82
USP48-210ENST00000489108 MGPP08493 103 aa9.91□□□□□ -0.82
USP48-210ENST00000489108 SUMO4Q6EEV6 95 aa9.91□□□□□ -0.82
USP48-210ENST00000489108 CHCHD10Q8WYQ3 142 aaPredicted RBP9.91□□□□□ -0.82
USP48-210ENST00000489108 AP1S3Q96PC3 154 aa9.91□□□□□ -0.82
USP48-210ENST00000489108 MARVELD1Q9BSK0 173 aa9.91□□□□□ -0.82
USP48-210ENST00000489108 AKR1C3P42330 323 aa9.9□□□□□ -0.82
USP48-210ENST00000489108 ZNF664Q8N3J9 261 aa9.9□□□□□ -0.82
USP48-210ENST00000489108 CST9LP1Q5W188 147 aa9.89□□□□□ -0.83
USP48-210ENST00000489108 PRR26Q8N8Z3 221 aa9.89□□□□□ -0.83
USP48-210ENST00000489108 LINC00526Q96FQ7 95 aa9.89□□□□□ -0.83
USP48-210ENST00000489108 PSORS1C2Q9UIG4 136 aa9.89□□□□□ -0.83
USP48-210ENST00000489108 IFITM3Q01628 133 aa9.88□□□□□ -0.83
USP48-210ENST00000489108 PGLYRP4Q96LB8 373 aa9.88□□□□□ -0.83
USP48-210ENST00000489108 UPK1BO75841 260 aa9.87□□□□□ -0.83
USP48-210ENST00000489108 AMTP48728 403 aa9.87□□□□□ -0.83
USP48-210ENST00000489108 RPL7L1Q6DKI1 246 aaKnown RBP9.87□□□□□ -0.83
USP48-210ENST00000489108 RASL11AQ6T310 242 aa9.87□□□□□ -0.83
USP48-210ENST00000489108 STOML3Q8TAV4 291 aa9.87□□□□□ -0.83
USP48-210ENST00000489108 FAT4Q6V0I7 4981 aa9.86□□□□□ -0.83
USP48-210ENST00000489108 TRAV26-2A0A0B4J265 109 aa9.86□□□□□ -0.83
USP48-210ENST00000489108 FHITP49789 147 aa9.86□□□□□ -0.83
USP48-210ENST00000489108 CACNG7P62955 275 aa9.86□□□□□ -0.83
USP48-210ENST00000489108 LCE2AQ5TA79 106 aaPredicted RBP9.86□□□□□ -0.83
USP48-210ENST00000489108 TCEAL7Q9BRU2 100 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 1815.1 ms