RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 TRBV6-5A0A0K0K1A5 114 aa14.57□□□□□ -0.08
HMG20B-213ENST00000488973 SDHAF1A6NFY7 115 aa14.57□□□□□ -0.08
HMG20B-213ENST00000488973 LRRC75A-AS1Q8N1F1 130 aa14.57□□□□□ -0.08
HMG20B-213ENST00000488973 ANKRD29Q8N6D5 301 aa14.57□□□□□ -0.08
HMG20B-213ENST00000488973 ZNRF2Q8NHG8 242 aa14.57□□□□□ -0.08
HMG20B-213ENST00000488973 AMELXQ99217 191 aa14.57□□□□□ -0.08
HMG20B-213ENST00000488973 CACNA1AO00555 2505 aa14.57□□□□□ -0.08
HMG20B-213ENST00000488973 JPT2Q9H910 190 aa14.56□□□□□ -0.08
HMG20B-213ENST00000488973 IGKV3-7A0A075B6H7 116 aa14.56□□□□□ -0.08
HMG20B-213ENST00000488973 LGALS9O00182 355 aa14.56□□□□□ -0.08
HMG20B-213ENST00000488973 PRO1854Q9UHT4 67 aa14.56□□□□□ -0.08
HMG20B-213ENST00000488973 J3QQQ9 107 aa14.55□□□□□ -0.08
HMG20B-213ENST00000488973 IGHV3-11P01762 117 aa14.55□□□□□ -0.08
HMG20B-213ENST00000488973 F5H697 171 aa14.55□□□□□ -0.08
HMG20B-213ENST00000488973 IGHV1-69P01742 117 aa14.55□□□□□ -0.08
HMG20B-213ENST00000488973 NBASA2RRP1 2371 aa14.55□□□□□ -0.08
HMG20B-213ENST00000488973 A0A087WWL8 130 aa14.54□□□□□ -0.08
HMG20B-213ENST00000488973 IGHG2P01859 326 aa14.54□□□□□ -0.08
HMG20B-213ENST00000488973 ZFHX3Q15911 3703 aa14.54□□□□□ -0.08
HMG20B-213ENST00000488973 SCGB1C2P0DMR2 95 aa14.54□□□□□ -0.08
HMG20B-213ENST00000488973 LGALS3P17931 250 aaKnown RBP14.54□□□□□ -0.08
HMG20B-213ENST00000488973 DAZ1Q9NQZ3 744 aaKnown RBP14.54□□□□□ -0.08
HMG20B-213ENST00000488973 IGHV3OR16-10A0A075B7F0 116 aa14.53□□□□□ -0.08
HMG20B-213ENST00000488973 LINC00694P0DN24 101 aa14.53□□□□□ -0.08
HMG20B-213ENST00000488973 GNLYP22749 145 aa14.53□□□□□ -0.08
HMG20B-213ENST00000488973 TGFAP01135 160 aa14.53□□□□□ -0.08
HMG20B-213ENST00000488973 DEFB104AQ8WTQ1 72 aa14.52□□□□□ -0.08
HMG20B-213ENST00000488973 A0A1B0GX51 115 aa14.52□□□□□ -0.09
HMG20B-213ENST00000488973 MRPL23Q16540 153 aaKnown RBP14.52□□□□□ -0.09
HMG20B-213ENST00000488973 NSUN5P1Q3KNT7 163 aa14.52□□□□□ -0.09
HMG20B-213ENST00000488973 J3KT08 172 aa14.51□□□□□ -0.09
HMG20B-213ENST00000488973 RHOHQ15669 191 aa14.51□□□□□ -0.09
HMG20B-213ENST00000488973 LEPROTO15243 131 aa14.51□□□□□ -0.09
HMG20B-213ENST00000488973 BRD3OSQ6XYD6 125 aa14.51□□□□□ -0.09
HMG20B-213ENST00000488973 C9orf85Q96MD7 179 aa14.51□□□□□ -0.09
HMG20B-213ENST00000488973 ABCA2Q9BZC7 2435 aa14.5□□□□□ -0.09
HMG20B-213ENST00000488973 TRAV12-3A0A0B4J271 114 aa14.5□□□□□ -0.09
HMG20B-213ENST00000488973 SPANXCQ9NY87 97 aa14.5□□□□□ -0.09
HMG20B-213ENST00000488973 TMEM223A0PJW6 202 aa14.5□□□□□ -0.09
HMG20B-213ENST00000488973 ITPR1Q14643 2758 aa14.49□□□□□ -0.09
HMG20B-213ENST00000488973 K7EMT4 169 aa14.49□□□□□ -0.09
HMG20B-213ENST00000488973 FAM19A5Q7Z5A7 132 aaPredicted RBP14.49□□□□□ -0.09
HMG20B-213ENST00000488973 DCANP1Q8TF63 244 aa14.49□□□□□ -0.09
HMG20B-213ENST00000488973 ZNF256Q9Y2P7 627 aaPredicted RBP14.49□□□□□ -0.09
HMG20B-213ENST00000488973 M0QY20 66 aa14.49□□□□□ -0.09
HMG20B-213ENST00000488973 OR13C6PQ8NH95 151 aa14.49□□□□□ -0.09
HMG20B-213ENST00000488973 ODF3Q96PU9 254 aa14.49□□□□□ -0.09
HMG20B-213ENST00000488973 IGHV3-16A0A0C4DH30 117 aa14.48□□□□□ -0.09
HMG20B-213ENST00000488973 IGLV1-40P01703 118 aa14.48□□□□□ -0.09
HMG20B-213ENST00000488973 LY6EQ16553 131 aa14.48□□□□□ -0.09
HMG20B-213ENST00000488973 FAM74A4Q5TZK3 123 aa14.48□□□□□ -0.09
HMG20B-213ENST00000488973 COL6A6A6NMZ7 2263 aa14.47□□□□□ -0.09
HMG20B-213ENST00000488973 A0A0B4J2C4 111 aa14.47□□□□□ -0.09
HMG20B-213ENST00000488973 A6NDX4 124 aa14.47□□□□□ -0.09
HMG20B-213ENST00000488973 C9JAW5 83 aa14.47□□□□□ -0.09
HMG20B-213ENST00000488973 IGHV3-33P01772 117 aa14.47□□□□□ -0.09
HMG20B-213ENST00000488973 C15orf53Q8NAA6 179 aa14.47□□□□□ -0.09
HMG20B-213ENST00000488973 RPS28P62857 69 aaKnown RBP14.46□□□□□ -0.09
HMG20B-213ENST00000488973 TRPT1Q86TN4 253 aaKnown RBP14.46□□□□□ -0.09
HMG20B-213ENST00000488973 TMEM263Q8WUH6 116 aaKnown RBP14.46□□□□□ -0.09
HMG20B-213ENST00000488973 ZNF56Q15929 161 aa14.46□□□□□ -0.09
HMG20B-213ENST00000488973 LOC107984640A0A0U1RRK4 108 aa14.45□□□□□ -0.1
HMG20B-213ENST00000488973 SLC25A20O43772 301 aa14.45□□□□□ -0.1
HMG20B-213ENST00000488973 A0A0J9YX75 114 aa14.45□□□□□ -0.1
HMG20B-213ENST00000488973 H3BUX3 64 aa14.45□□□□□ -0.1
HMG20B-213ENST00000488973 P0DMU3 169 aa14.45□□□□□ -0.1
HMG20B-213ENST00000488973 FAM231AP0DMU4 169 aa14.45□□□□□ -0.1
HMG20B-213ENST00000488973 FAM231CP0DMU5 169 aa14.45□□□□□ -0.1
HMG20B-213ENST00000488973 C20orf203Q8NBC4 194 aa14.45□□□□□ -0.1
HMG20B-213ENST00000488973 OPRPNQ99935 248 aaPredicted RBP14.45□□□□□ -0.1
HMG20B-213ENST00000488973 PKD1L2Q7Z442 2459 aa14.45□□□□□ -0.1
HMG20B-213ENST00000488973 EIF4EBP3O60516 100 aaPredicted RBP14.44□□□□□ -0.1
HMG20B-213ENST00000488973 ZNF22P17026 224 aaPredicted RBP14.44□□□□□ -0.1
HMG20B-213ENST00000488973 EDN2P20800 178 aa14.44□□□□□ -0.1
HMG20B-213ENST00000488973 C19orf84I3L1E1 186 aa14.44□□□□□ -0.1
HMG20B-213ENST00000488973 M0R2P5 195 aa14.44□□□□□ -0.1
HMG20B-213ENST00000488973 BLCAPP62952 87 aa14.44□□□□□ -0.1
HMG20B-213ENST00000488973 TMEM101Q96IK0 257 aa14.43□□□□□ -0.1
HMG20B-213ENST00000488973 SPANXDQ9BXN6 97 aa14.43□□□□□ -0.1
HMG20B-213ENST00000488973 HIVEP3Q5T1R4 2406 aa14.43□□□□□ -0.1
HMG20B-213ENST00000488973 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.43□□□□□ -0.1
HMG20B-213ENST00000488973 NDUFA7O95182 113 aa14.43□□□□□ -0.1
HMG20B-213ENST00000488973 MUSTN1Q8IVN3 82 aa14.43□□□□□ -0.1
HMG20B-213ENST00000488973 TRAV2A0A0B4J234 112 aa14.42□□□□□ -0.1
HMG20B-213ENST00000488973 I3L3M4 83 aa14.42□□□□□ -0.1
HMG20B-213ENST00000488973 IGHV4-39P01824 125 aa14.42□□□□□ -0.1
HMG20B-213ENST00000488973 IGHV4-38-2P0DP08 117 aa14.42□□□□□ -0.1
HMG20B-213ENST00000488973 CFHR3Q02985 330 aa14.42□□□□□ -0.1
HMG20B-213ENST00000488973 LINC01600Q96MT4 127 aa14.42□□□□□ -0.1
HMG20B-213ENST00000488973 TRAV8-4A0A0B4J246 113 aa14.42□□□□□ -0.1
HMG20B-213ENST00000488973 Q8N1Y9 231 aa14.42□□□□□ -0.1
HMG20B-213ENST00000488973 CHCHD5Q9BSY4 110 aa14.42□□□□□ -0.1
HMG20B-213ENST00000488973 AKAP6Q13023 2319 aa14.41□□□□□ -0.1
HMG20B-213ENST00000488973 C3orf56Q8N813 242 aa14.41□□□□□ -0.1
HMG20B-213ENST00000488973 IGLV4-3A0A075B6K6 122 aa14.4□□□□□ -0.1
HMG20B-213ENST00000488973 IGHV1OR15-1A0A075B7D0 117 aa14.4□□□□□ -0.1
HMG20B-213ENST00000488973 RPL13AP40429 203 aaKnown RBP14.4□□□□□ -0.1
HMG20B-213ENST00000488973 TRAV12-2A0A075B6T6 113 aa14.39□□□□□ -0.11
HMG20B-213ENST00000488973 A0A0J9YXV3 536 aa14.39□□□□□ -0.11
HMG20B-213ENST00000488973 SPTAN1Q13813 2472 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms