RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 MYMXA0A1B0GTQ4 84 aa13.62□□□□□ -0.23
COL16A1-215ENST00000488897 RNASE3P12724 160 aaKnown RBP13.62□□□□□ -0.23
COL16A1-215ENST00000488897 POM121L12Q8N7R1 296 aa13.62□□□□□ -0.23
COL16A1-215ENST00000488897 IGLL5B9A064 214 aa13.62□□□□□ -0.23
COL16A1-215ENST00000488897 F6UB75 175 aa13.62□□□□□ -0.23
COL16A1-215ENST00000488897 EDN2P20800 178 aa13.62□□□□□ -0.23
COL16A1-215ENST00000488897 C12orf74Q32Q52 190 aa13.62□□□□□ -0.23
COL16A1-215ENST00000488897 BAALCQ8WXS3 180 aa13.61□□□□□ -0.23
COL16A1-215ENST00000488897 NXPH4O95158 308 aa13.61□□□□□ -0.23
COL16A1-215ENST00000488897 DAZ1Q9NQZ3 744 aaKnown RBP13.61□□□□□ -0.23
COL16A1-215ENST00000488897 TRBV7-3A0A075B6L6 115 aa13.6□□□□□ -0.23
COL16A1-215ENST00000488897 IGKV3-7A0A075B6H7 116 aa13.6□□□□□ -0.23
COL16A1-215ENST00000488897 IGHV4OR15-8A0A075B7B6 117 aa13.6□□□□□ -0.23
COL16A1-215ENST00000488897 A0A087WW49 117 aa13.6□□□□□ -0.23
COL16A1-215ENST00000488897 LINC01549A6NIU2 74 aa13.6□□□□□ -0.23
COL16A1-215ENST00000488897 ELANEP08246 267 aa13.6□□□□□ -0.23
COL16A1-215ENST00000488897 RPL32P62910 135 aaKnown RBP13.6□□□□□ -0.23
COL16A1-215ENST00000488897 PRSS29PA6NIE9 313 aa13.59□□□□□ -0.23
COL16A1-215ENST00000488897 ID1P41134 155 aa13.59□□□□□ -0.23
COL16A1-215ENST00000488897 SLURP1P55000 103 aa13.59□□□□□ -0.23
COL16A1-215ENST00000488897 SAMD13Q5VXD3 122 aa13.59□□□□□ -0.23
COL16A1-215ENST00000488897 FOXI2Q6ZQN5 318 aa13.59□□□□□ -0.23
COL16A1-215ENST00000488897 ZNF479Q96JC4 524 aa13.59□□□□□ -0.23
COL16A1-215ENST00000488897 CITED1Q99966 193 aa13.59□□□□□ -0.23
COL16A1-215ENST00000488897 KLLNB2CW77 178 aa13.59□□□□□ -0.23
COL16A1-215ENST00000488897 K7EMT4 169 aa13.58□□□□□ -0.24
COL16A1-215ENST00000488897 RAX2Q96IS3 184 aa13.58□□□□□ -0.24
COL16A1-215ENST00000488897 AGRNO00468 2067 aa13.58□□□□□ -0.24
COL16A1-215ENST00000488897 FAM159AQ6UWV7 190 aa13.58□□□□□ -0.24
COL16A1-215ENST00000488897 KIF25-AS1Q9Y6Z4 181 aa13.58□□□□□ -0.24
COL16A1-215ENST00000488897 CMYA5Q8N3K9 4069 aa13.58□□□□□ -0.24
COL16A1-215ENST00000488897 RIPPLY3P57055 190 aa13.57□□□□□ -0.24
COL16A1-215ENST00000488897 CYSLTR1Q9Y271 337 aa13.57□□□□□ -0.24
COL16A1-215ENST00000488897 A0A1B0GWB2 263 aa13.56□□□□□ -0.24
COL16A1-215ENST00000488897 F8W1H4 67 aa13.56□□□□□ -0.24
COL16A1-215ENST00000488897 LINC00315P59091 139 aa13.56□□□□□ -0.24
COL16A1-215ENST00000488897 UBE2E2Q96LR5 201 aa13.56□□□□□ -0.24
COL16A1-215ENST00000488897 TSSC4Q9Y5U2 329 aaPredicted RBP13.56□□□□□ -0.24
COL16A1-215ENST00000488897 RPL24P83731 157 aaKnown RBP13.56□□□□□ -0.24
COL16A1-215ENST00000488897 RNF152Q8N8N0 203 aa13.56□□□□□ -0.24
COL16A1-215ENST00000488897 LGALS1P09382 135 aaKnown RBP13.55□□□□□ -0.24
COL16A1-215ENST00000488897 PRADC1Q9BSG0 188 aa13.55□□□□□ -0.24
COL16A1-215ENST00000488897 ZNF580Q9UK33 172 aa13.55□□□□□ -0.24
COL16A1-215ENST00000488897 RRN3P1Q2M238 152 aa13.55□□□□□ -0.24
COL16A1-215ENST00000488897 PAPPA-AS1Q5QFB9 102 aa13.55□□□□□ -0.24
COL16A1-215ENST00000488897 POLR2KP53803 58 aaKnown RBP13.54□□□□□ -0.24
COL16A1-215ENST00000488897 MUC4Q99102 2169 aa13.53□□□□□ -0.24
COL16A1-215ENST00000488897 VCYO14598 125 aa13.53□□□□□ -0.24
COL16A1-215ENST00000488897 DUSP14O95147 198 aaKnown RBP13.53□□□□□ -0.24
COL16A1-215ENST00000488897 SYNJ2BPP57105 145 aa13.53□□□□□ -0.24
COL16A1-215ENST00000488897 DCANP1Q8TF63 244 aa13.53□□□□□ -0.24
COL16A1-215ENST00000488897 TEX48A0A1B0GUV7 120 aa13.52□□□□□ -0.24
COL16A1-215ENST00000488897 ZNF815PA8K554 130 aa13.52□□□□□ -0.24
COL16A1-215ENST00000488897 CCL24O00175 119 aa13.52□□□□□ -0.24
COL16A1-215ENST00000488897 HOXD3P31249 432 aaPredicted RBP13.52□□□□□ -0.24
COL16A1-215ENST00000488897 SUMO4Q6EEV6 95 aa13.52□□□□□ -0.24
COL16A1-215ENST00000488897 ZFP2Q6ZN57 461 aa13.52□□□□□ -0.24
COL16A1-215ENST00000488897 SVIPQ8NHG7 77 aa13.52□□□□□ -0.24
COL16A1-215ENST00000488897 DLX4Q92988 240 aaPredicted RBP13.52□□□□□ -0.24
COL16A1-215ENST00000488897 KIR2DL4Q99706 377 aa13.52□□□□□ -0.24
COL16A1-215ENST00000488897 CRYGDP07320 174 aa13.52□□□□□ -0.25
COL16A1-215ENST00000488897 C4orf3Q8WVX3 66 aa13.52□□□□□ -0.25
COL16A1-215ENST00000488897 TMEM141Q96I45 108 aa13.52□□□□□ -0.25
COL16A1-215ENST00000488897 TP53TG1Q9Y2A0 90 aa13.52□□□□□ -0.25
COL16A1-215ENST00000488897 NOTCH1P46531 2555 aa13.51□□□□□ -0.25
COL16A1-215ENST00000488897 TMEM238LA0A1B0GVL6 79 aa13.51□□□□□ -0.25
COL16A1-215ENST00000488897 A6NJY4 79 aa13.51□□□□□ -0.25
COL16A1-215ENST00000488897 CD7P09564 240 aa13.51□□□□□ -0.25
COL16A1-215ENST00000488897 HERVK_113P61574 105 aa13.51□□□□□ -0.25
COL16A1-215ENST00000488897 MGAM2Q2M2H8 2515 aa13.51□□□□□ -0.25
COL16A1-215ENST00000488897 IGIPA6NJ69 53 aa13.51□□□□□ -0.25
COL16A1-215ENST00000488897 PMVKQ15126 192 aa13.51□□□□□ -0.25
COL16A1-215ENST00000488897 SCGB1D4Q6XE38 83 aa13.51□□□□□ -0.25
COL16A1-215ENST00000488897 F5H697 171 aa13.5□□□□□ -0.25
COL16A1-215ENST00000488897 ODF3Q96PU9 254 aa13.5□□□□□ -0.25
COL16A1-215ENST00000488897 TRAV12-3A0A0B4J271 114 aa13.5□□□□□ -0.25
COL16A1-215ENST00000488897 H3BMG7 143 aa13.5□□□□□ -0.25
COL16A1-215ENST00000488897 TSHBP01222 138 aa13.5□□□□□ -0.25
COL16A1-215ENST00000488897 TIMM17AQ99595 171 aa13.5□□□□□ -0.25
COL16A1-215ENST00000488897 JPT2Q9H910 190 aa13.5□□□□□ -0.25
COL16A1-215ENST00000488897 NDUFA11Q86Y39 141 aa13.49□□□□□ -0.25
COL16A1-215ENST00000488897 IGLV4-69A0A075B6H9 119 aa13.49□□□□□ -0.25
COL16A1-215ENST00000488897 TRBV6-5A0A0K0K1A5 114 aa13.49□□□□□ -0.25
COL16A1-215ENST00000488897 J3QR89 54 aa13.49□□□□□ -0.25
COL16A1-215ENST00000488897 LGALS9O00182 355 aa13.49□□□□□ -0.25
COL16A1-215ENST00000488897 WFDC2Q14508 124 aa13.49□□□□□ -0.25
COL16A1-215ENST00000488897 A0A087WWL8 130 aa13.48□□□□□ -0.25
COL16A1-215ENST00000488897 SDHAF1A6NFY7 115 aa13.48□□□□□ -0.25
COL16A1-215ENST00000488897 C11orf86A6NJI1 115 aa13.48□□□□□ -0.25
COL16A1-215ENST00000488897 SRSF9Q13242 221 aaKnown RBP eCLIP13.48□□□□□ -0.25
COL16A1-215ENST00000488897 CD300EQ496F6 205 aaPredicted RBP13.48□□□□□ -0.25
COL16A1-215ENST00000488897 GAGE13Q4V321 117 aa13.48□□□□□ -0.25
COL16A1-215ENST00000488897 SPANXB1Q9NS25 103 aaPredicted RBP13.48□□□□□ -0.25
COL16A1-215ENST00000488897 NBEAL1Q6ZS30 2694 aa13.47□□□□□ -0.25
COL16A1-215ENST00000488897 TRBV27A0A0K0K1C4 114 aa13.47□□□□□ -0.25
COL16A1-215ENST00000488897 PF4P02776 101 aa13.47□□□□□ -0.25
COL16A1-215ENST00000488897 MORN3Q6PF18 240 aaPredicted RBP13.47□□□□□ -0.25
COL16A1-215ENST00000488897 SYT8Q8NBV8 401 aa13.47□□□□□ -0.25
COL16A1-215ENST00000488897 C9orf85Q96MD7 179 aa13.47□□□□□ -0.25
COL16A1-215ENST00000488897 SORL1Q92673 2214 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms