RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 OR10AG1Q8NH19 301 aa12.18□□□□□ -0.46
GGPS1-206ENST00000488594 VAX2Q9UIW0 290 aa12.18□□□□□ -0.46
GGPS1-206ENST00000488594 PKHD1L1Q86WI1 4243 aa12.18□□□□□ -0.46
GGPS1-206ENST00000488594 TRBV25-1A0A075B6N4 114 aa12.18□□□□□ -0.46
GGPS1-206ENST00000488594 CLPSL2Q6UWE3 100 aa12.18□□□□□ -0.46
GGPS1-206ENST00000488594 NTM-AS1Q6ZSK4 140 aa12.18□□□□□ -0.46
GGPS1-206ENST00000488594 MAP1LC3B2A6NCE7 125 aa12.17□□□□□ -0.46
GGPS1-206ENST00000488594 F5H697 171 aa12.17□□□□□ -0.46
GGPS1-206ENST00000488594 AKR1C3P42330 323 aa12.17□□□□□ -0.46
GGPS1-206ENST00000488594 DERL1Q9BUN8 251 aa12.17□□□□□ -0.46
GGPS1-206ENST00000488594 MAP1LC3BQ9GZQ8 125 aa12.17□□□□□ -0.46
GGPS1-206ENST00000488594 MED28Q9H204 178 aa12.17□□□□□ -0.46
GGPS1-206ENST00000488594 GAGE6Q13070 117 aa12.16□□□□□ -0.46
GGPS1-206ENST00000488594 Q5BKY6 102 aa12.16□□□□□ -0.46
GGPS1-206ENST00000488594 SPANXN1Q5VSR9 72 aa12.16□□□□□ -0.46
GGPS1-206ENST00000488594 CST9LP1Q5W188 147 aa12.16□□□□□ -0.46
GGPS1-206ENST00000488594 STOML3Q8TAV4 291 aa12.16□□□□□ -0.46
GGPS1-206ENST00000488594 RNF185Q96GF1 192 aa12.16□□□□□ -0.46
GGPS1-206ENST00000488594 SSBP4Q9BWG4 385 aaPredicted RBP12.16□□□□□ -0.46
GGPS1-206ENST00000488594 SNAI2O43623 268 aa12.15□□□□□ -0.46
GGPS1-206ENST00000488594 S100A9P06702 114 aaKnown RBP12.15□□□□□ -0.46
GGPS1-206ENST00000488594 OR5AL1P0C617 328 aa12.15□□□□□ -0.46
GGPS1-206ENST00000488594 IGHV3-64A0A075B6Q5 118 aa12.14□□□□□ -0.47
GGPS1-206ENST00000488594 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.14□□□□□ -0.47
GGPS1-206ENST00000488594 TRAV8-4A0A0B4J246 113 aa12.14□□□□□ -0.47
GGPS1-206ENST00000488594 hDV102S1A0JD36 115 aa12.14□□□□□ -0.47
GGPS1-206ENST00000488594 P01737 135 aa12.14□□□□□ -0.47
GGPS1-206ENST00000488594 GIPP09681 153 aaPredicted RBP12.14□□□□□ -0.47
GGPS1-206ENST00000488594 SMIM17P0DL12 118 aa12.14□□□□□ -0.47
GGPS1-206ENST00000488594 REG3AQ06141 175 aa12.14□□□□□ -0.47
GGPS1-206ENST00000488594 IQCJQ1A5X6 159 aa12.14□□□□□ -0.47
GGPS1-206ENST00000488594 DPH3Q96FX2 82 aa12.14□□□□□ -0.47
GGPS1-206ENST00000488594 FXYD6-FXYD2A0A087WZ82 144 aa12.13□□□□□ -0.47
GGPS1-206ENST00000488594 AP5S1Q9NUS5 200 aa12.13□□□□□ -0.47
GGPS1-206ENST00000488594 IGHV1-24A0A0C4DH33 117 aa12.12□□□□□ -0.47
GGPS1-206ENST00000488594 AP1S3Q96PC3 154 aa12.12□□□□□ -0.47
GGPS1-206ENST00000488594 IGLV10-54A0A075B6I4 117 aa12.11□□□□□ -0.47
GGPS1-206ENST00000488594 A0A087WYN8 130 aa12.11□□□□□ -0.47
GGPS1-206ENST00000488594 GZMBP10144 247 aa12.11□□□□□ -0.47
GGPS1-206ENST00000488594 KIF25-AS1Q9Y6Z4 181 aa12.11□□□□□ -0.47
GGPS1-206ENST00000488594 MUC21A0A0G2JKD1 596 aa12.1□□□□□ -0.47
GGPS1-206ENST00000488594 MUC21A0A140T8X8 626 aa12.1□□□□□ -0.47
GGPS1-206ENST00000488594 SPACA4Q8TDM5 124 aa12.1□□□□□ -0.47
GGPS1-206ENST00000488594 MLST8Q9BVC4 326 aa12.1□□□□□ -0.47
GGPS1-206ENST00000488594 DPH3P1Q9H4G8 78 aa12.1□□□□□ -0.47
GGPS1-206ENST00000488594 H7C1H1 209 aa12.09□□□□□ -0.47
GGPS1-206ENST00000488594 PAGE4O60829 102 aa12.09□□□□□ -0.47
GGPS1-206ENST00000488594 BAGE2Q86Y30 109 aa12.09□□□□□ -0.47
GGPS1-206ENST00000488594 A0A1B0GUV1 79 aa12.08□□□□□ -0.48
GGPS1-206ENST00000488594 C20orf203Q8NBC4 194 aa12.08□□□□□ -0.48
GGPS1-206ENST00000488594 C7orf33Q8WU49 177 aa12.08□□□□□ -0.48
GGPS1-206ENST00000488594 SSTP61278 116 aa12.07□□□□□ -0.48
GGPS1-206ENST00000488594 PLAC8Q9NZF1 115 aa12.07□□□□□ -0.48
GGPS1-206ENST00000488594 M0QY20 66 aa12.06□□□□□ -0.48
GGPS1-206ENST00000488594 CHTF8P0CG12 524 aa12.06□□□□□ -0.48
GGPS1-206ENST00000488594 TMEM243Q9BU79 118 aa12.06□□□□□ -0.48
GGPS1-206ENST00000488594 SCO2A0A1W2PP80 73 aa12.05□□□□□ -0.48
GGPS1-206ENST00000488594 PFDN1O60925 122 aa12.05□□□□□ -0.48
GGPS1-206ENST00000488594 SLPIP03973 132 aa12.05□□□□□ -0.48
GGPS1-206ENST00000488594 PHOX2AO14813 284 aa12.05□□□□□ -0.48
GGPS1-206ENST00000488594 WDR73Q6P4I2 378 aa12.05□□□□□ -0.48
GGPS1-206ENST00000488594 CYTL1Q9NRR1 136 aa12.05□□□□□ -0.48
GGPS1-206ENST00000488594 IGLV4-60A0A075B6I1 120 aa12.04□□□□□ -0.48
GGPS1-206ENST00000488594 MGPP08493 103 aa12.04□□□□□ -0.48
GGPS1-206ENST00000488594 CFAP161Q6P656 301 aa12.04□□□□□ -0.48
GGPS1-206ENST00000488594 RAB5CP51148 216 aa12.03□□□□□ -0.48
GGPS1-206ENST00000488594 SFT2D1Q8WV19 159 aa12.03□□□□□ -0.48
GGPS1-206ENST00000488594 PGLYRP4Q96LB8 373 aa12.03□□□□□ -0.48
GGPS1-206ENST00000488594 LINC01600Q96MT4 127 aa12.03□□□□□ -0.48
GGPS1-206ENST00000488594 ARPC5O15511 151 aa12.02□□□□□ -0.49
GGPS1-206ENST00000488594 SUMO4Q6EEV6 95 aa12.02□□□□□ -0.49
GGPS1-206ENST00000488594 TMUB2Q71RG4 321 aa12.02□□□□□ -0.49
GGPS1-206ENST00000488594 MBD3L1Q8WWY6 194 aa12.02□□□□□ -0.49
GGPS1-206ENST00000488594 GFRA4Q9GZZ7 299 aa12.02□□□□□ -0.49
GGPS1-206ENST00000488594 UMAD1C9J7I0 102 aa12.01□□□□□ -0.49
GGPS1-206ENST00000488594 UBE2L6O14933 153 aa12.01□□□□□ -0.49
GGPS1-206ENST00000488594 SULT1A2P50226 295 aa12.01□□□□□ -0.49
GGPS1-206ENST00000488594 NKX2-5P52952 324 aaPredicted RBP12.01□□□□□ -0.49
GGPS1-206ENST00000488594 RASL11AQ6T310 242 aa12.01□□□□□ -0.49
GGPS1-206ENST00000488594 RPS10P46783 165 aaKnown RBP12□□□□□ -0.49
GGPS1-206ENST00000488594 CACNG7P62955 275 aa12□□□□□ -0.49
GGPS1-206ENST00000488594 COX6A2Q02221 97 aa12□□□□□ -0.49
GGPS1-206ENST00000488594 FER1L6-AS1Q8NA97 138 aa12□□□□□ -0.49
GGPS1-206ENST00000488594 TPPP3Q9BW30 176 aa12□□□□□ -0.49
GGPS1-206ENST00000488594 NDUFS6O75380 124 aaKnown RBP11.99□□□□□ -0.49
GGPS1-206ENST00000488594 IGLC6P0CF74 106 aa11.99□□□□□ -0.49
GGPS1-206ENST00000488594 RPS20P60866 119 aaKnown RBP11.99□□□□□ -0.49
GGPS1-206ENST00000488594 PRR3P79522 188 aaKnown RBP11.99□□□□□ -0.49
GGPS1-206ENST00000488594 C15orf56Q8N910 161 aa11.99□□□□□ -0.49
GGPS1-206ENST00000488594 FAM213BQ8TBF2 198 aa11.99□□□□□ -0.49
GGPS1-206ENST00000488594 GTSF1Q8WW33 167 aa11.99□□□□□ -0.49
GGPS1-206ENST00000488594 LRP2P98164 4655 aa11.99□□□□□ -0.49
GGPS1-206ENST00000488594 G3V3Q6 166 aa11.98□□□□□ -0.49
GGPS1-206ENST00000488594 RPL35P42766 123 aaKnown RBP11.98□□□□□ -0.49
GGPS1-206ENST00000488594 NIT2Q9NQR4 276 aa11.98□□□□□ -0.49
GGPS1-206ENST00000488594 RNF213Q63HN8 5207 aa11.98□□□□□ -0.49
GGPS1-206ENST00000488594 A0A1B0GV50 99 aa11.97□□□□□ -0.49
GGPS1-206ENST00000488594 AMTP48728 403 aa11.97□□□□□ -0.49
GGPS1-206ENST00000488594 COTL1Q14019 142 aa11.97□□□□□ -0.49
GGPS1-206ENST00000488594 MAJINQ3KP22 176 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms