RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 LINC00862A6NCI5 91 aa10.04□□□□□ -0.8
TRIM50-203ENST00000488217 UBE2D3P61077 147 aa10.04□□□□□ -0.8
TRIM50-203ENST00000488217 UBE2D2P62837 147 aa10.04□□□□□ -0.8
TRIM50-203ENST00000488217 MANBALQ9NQG1 85 aa10.04□□□□□ -0.8
TRIM50-203ENST00000488217 RAB4BP61018 213 aa10.03□□□□□ -0.8
TRIM50-203ENST00000488217 Q0VG73 95 aa10.03□□□□□ -0.8
TRIM50-203ENST00000488217 KRTAP29-1A8MX34 341 aaPredicted RBP10.02□□□□□ -0.81
TRIM50-203ENST00000488217 S100A9P06702 114 aaKnown RBP10.02□□□□□ -0.81
TRIM50-203ENST00000488217 ATRAIDQ6UW56 229 aa10.02□□□□□ -0.81
TRIM50-203ENST00000488217 SCXQ7RTU7 201 aa10.02□□□□□ -0.81
TRIM50-203ENST00000488217 OR10G8Q8NGN5 311 aa10.02□□□□□ -0.81
TRIM50-203ENST00000488217 CHAC1Q9BUX1 264 aa10.02□□□□□ -0.81
TRIM50-203ENST00000488217 TRBV6-8A0A0A6YYG3 113 aa10.01□□□□□ -0.81
TRIM50-203ENST00000488217 IFNA1P01562 189 aa10.01□□□□□ -0.81
TRIM50-203ENST00000488217 BCL2P10415 239 aa10□□□□□ -0.81
TRIM50-203ENST00000488217 AKR1C3P42330 323 aa10□□□□□ -0.81
TRIM50-203ENST00000488217 ENHOQ6UWT2 76 aa10□□□□□ -0.81
TRIM50-203ENST00000488217 COMMD7Q86VX2 200 aa10□□□□□ -0.81
TRIM50-203ENST00000488217 PRR27Q6MZM9 219 aa9.99□□□□□ -0.81
TRIM50-203ENST00000488217 BAGE2Q86Y30 109 aa9.99□□□□□ -0.81
TRIM50-203ENST00000488217 CIRBP-AS1Q8TBR5 109 aa9.99□□□□□ -0.81
TRIM50-203ENST00000488217 SSBP4Q9BWG4 385 aaPredicted RBP9.99□□□□□ -0.81
TRIM50-203ENST00000488217 VAX2Q9UIW0 290 aa9.99□□□□□ -0.81
TRIM50-203ENST00000488217 LRP1Q07954 4544 aaKnown RBP9.98□□□□□ -0.81
TRIM50-203ENST00000488217 TAGLN2P37802 199 aaKnown RBP9.98□□□□□ -0.81
TRIM50-203ENST00000488217 RPL19P84098 196 aaKnown RBP9.98□□□□□ -0.81
TRIM50-203ENST00000488217 MEF2BQ02080 365 aaPredicted RBP9.98□□□□□ -0.81
TRIM50-203ENST00000488217 C14orf177Q52M58 125 aa9.98□□□□□ -0.81
TRIM50-203ENST00000488217 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.98□□□□□ -0.81
TRIM50-203ENST00000488217 NEXN-AS1Q8NBZ9 246 aa9.98□□□□□ -0.81
TRIM50-203ENST00000488217 OR10AG1Q8NH19 301 aa9.98□□□□□ -0.81
TRIM50-203ENST00000488217 MLST8Q9BVC4 326 aa9.98□□□□□ -0.81
TRIM50-203ENST00000488217 C1orf43Q9BWL3 253 aa9.98□□□□□ -0.81
TRIM50-203ENST00000488217 SCO2A0A1W2PP80 73 aa9.97□□□□□ -0.81
TRIM50-203ENST00000488217 F5H697 171 aa9.97□□□□□ -0.81
TRIM50-203ENST00000488217 C15orf54Q8N8G6 183 aa9.97□□□□□ -0.81
TRIM50-203ENST00000488217 MED9Q9NWA0 146 aa9.97□□□□□ -0.81
TRIM50-203ENST00000488217 FAT3Q8TDW7 4589 aa9.96□□□□□ -0.81
TRIM50-203ENST00000488217 MUC21A0A0G2JKD1 596 aa9.96□□□□□ -0.82
TRIM50-203ENST00000488217 MUC21A0A140T8X8 626 aa9.96□□□□□ -0.82
TRIM50-203ENST00000488217 CXCL1P09341 107 aa9.96□□□□□ -0.82
TRIM50-203ENST00000488217 SSTP61278 116 aa9.96□□□□□ -0.82
TRIM50-203ENST00000488217 ZNF56Q15929 161 aa9.96□□□□□ -0.82
TRIM50-203ENST00000488217 CHCHD5Q9BSY4 110 aa9.96□□□□□ -0.82
TRIM50-203ENST00000488217 SNAI2O43623 268 aa9.95□□□□□ -0.82
TRIM50-203ENST00000488217 PDE6DO43924 150 aa9.95□□□□□ -0.82
TRIM50-203ENST00000488217 CRPP02741 224 aa9.95□□□□□ -0.82
TRIM50-203ENST00000488217 ANGP03950 147 aaKnown RBP9.95□□□□□ -0.82
TRIM50-203ENST00000488217 OR5AL1P0C617 328 aa9.95□□□□□ -0.82
TRIM50-203ENST00000488217 KRTAP10-4P60372 401 aaPredicted RBP9.95□□□□□ -0.82
TRIM50-203ENST00000488217 PKIAP61925 76 aa9.95□□□□□ -0.82
TRIM50-203ENST00000488217 MPV17L2Q567V2 206 aa9.95□□□□□ -0.82
TRIM50-203ENST00000488217 TMEM97Q5BJF2 176 aa9.95□□□□□ -0.82
TRIM50-203ENST00000488217 SPANXN1Q5VSR9 72 aa9.95□□□□□ -0.82
TRIM50-203ENST00000488217 C11orf52Q96A22 123 aa9.95□□□□□ -0.82
TRIM50-203ENST00000488217 EIF5A2Q9GZV4 153 aaKnown RBP9.95□□□□□ -0.82
TRIM50-203ENST00000488217 MIAQ16674 131 aa9.94□□□□□ -0.82
TRIM50-203ENST00000488217 DGAT2L7PQ6IED9 249 aa9.94□□□□□ -0.82
TRIM50-203ENST00000488217 NTM-AS1Q6ZSK4 140 aa9.94□□□□□ -0.82
TRIM50-203ENST00000488217 KIF25-AS1Q9Y6Z4 181 aa9.94□□□□□ -0.82
TRIM50-203ENST00000488217 IGLV2-8P01709 118 aa9.93□□□□□ -0.82
TRIM50-203ENST00000488217 SMIM17P0DL12 118 aa9.93□□□□□ -0.82
TRIM50-203ENST00000488217 USP17L23D6RBM5 183 aa9.92□□□□□ -0.82
TRIM50-203ENST00000488217 OXTP01178 125 aa9.92□□□□□ -0.82
TRIM50-203ENST00000488217 SERTAD4-AS1Q5TG53 156 aa9.92□□□□□ -0.82
TRIM50-203ENST00000488217 DERL1Q9BUN8 251 aa9.92□□□□□ -0.82
TRIM50-203ENST00000488217 HMCN2Q8NDA2 5059 aa9.92□□□□□ -0.82
TRIM50-203ENST00000488217 TMEM250H0YL14 139 aa9.91□□□□□ -0.82
TRIM50-203ENST00000488217 NDUFS6O75380 124 aaKnown RBP9.91□□□□□ -0.82
TRIM50-203ENST00000488217 PRSS1P07477 247 aa9.91□□□□□ -0.82
TRIM50-203ENST00000488217 SRP19P09132 144 aaKnown RBP9.91□□□□□ -0.82
TRIM50-203ENST00000488217 RPL35P42766 123 aaKnown RBP9.91□□□□□ -0.82
TRIM50-203ENST00000488217 RBX1P62877 108 aa9.91□□□□□ -0.82
TRIM50-203ENST00000488217 SRSF3P84103 164 aaKnown RBP9.91□□□□□ -0.82
TRIM50-203ENST00000488217 LINC00269Q8N2A0 174 aa9.91□□□□□ -0.82
TRIM50-203ENST00000488217 PRR34Q9NV39 138 aa9.91□□□□□ -0.82
TRIM50-203ENST00000488217 RAB19A4D1S5 217 aa9.9□□□□□ -0.82
TRIM50-203ENST00000488217 C9JQL5 133 aa9.9□□□□□ -0.82
TRIM50-203ENST00000488217 GAGE6Q13070 117 aa9.9□□□□□ -0.82
TRIM50-203ENST00000488217 PEA15Q15121 130 aa9.9□□□□□ -0.82
TRIM50-203ENST00000488217 TRBV25-1A0A075B6N4 114 aa9.89□□□□□ -0.83
TRIM50-203ENST00000488217 M0QY20 66 aa9.89□□□□□ -0.83
TRIM50-203ENST00000488217 HLA-DQA1P01909 254 aa9.89□□□□□ -0.83
TRIM50-203ENST00000488217 KRTAP26-1Q6PEX3 210 aa9.89□□□□□ -0.83
TRIM50-203ENST00000488217 C9orf163Q8N9P6 203 aa9.89□□□□□ -0.83
TRIM50-203ENST00000488217 SMDT1Q9H4I9 107 aa9.89□□□□□ -0.83
TRIM50-203ENST00000488217 CEBPGP53567 150 aa9.88□□□□□ -0.83
TRIM50-203ENST00000488217 IQCJQ1A5X6 159 aa9.88□□□□□ -0.83
TRIM50-203ENST00000488217 CENPWQ5EE01 88 aa9.88□□□□□ -0.83
TRIM50-203ENST00000488217 CLRN3Q8NCR9 226 aa9.88□□□□□ -0.83
TRIM50-203ENST00000488217 DAZAP1Q96EP5 407 aaKnown RBP9.88□□□□□ -0.83
TRIM50-203ENST00000488217 AP1S3Q96PC3 154 aa9.88□□□□□ -0.83
TRIM50-203ENST00000488217 TRBV20OR9-2A0A075B6H5 130 aa9.87□□□□□ -0.83
TRIM50-203ENST00000488217 IGHV1-24A0A0C4DH33 117 aa9.87□□□□□ -0.83
TRIM50-203ENST00000488217 SDIM1Q6ZPB5 146 aa9.87□□□□□ -0.83
TRIM50-203ENST00000488217 H7C1H1 209 aa9.86□□□□□ -0.83
TRIM50-203ENST00000488217 IGLC6P0CF74 106 aa9.86□□□□□ -0.83
TRIM50-203ENST00000488217 GZMBP10144 247 aa9.86□□□□□ -0.83
TRIM50-203ENST00000488217 GNG4P50150 75 aa9.86□□□□□ -0.83
TRIM50-203ENST00000488217 RPS20P60866 119 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms