RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 F8W036 122 aa7.5□□□□□ -1.21
NIPAL3-207ENST00000488155 INAFM2P0DMQ5 153 aa7.5□□□□□ -1.21
NIPAL3-207ENST00000488155 S100A1P23297 94 aa7.5□□□□□ -1.21
NIPAL3-207ENST00000488155 ZNF56Q15929 161 aa7.5□□□□□ -1.21
NIPAL3-207ENST00000488155 OR10AG1Q8NH19 301 aa7.5□□□□□ -1.21
NIPAL3-207ENST00000488155 NTN5Q8WTR8 489 aaPredicted RBP7.5□□□□□ -1.21
NIPAL3-207ENST00000488155 BAALCQ8WXS3 180 aa7.5□□□□□ -1.21
NIPAL3-207ENST00000488155 KLK12Q9UKR0 248 aa7.5□□□□□ -1.21
NIPAL3-207ENST00000488155 IGKV2D-24A0A075B6R9 120 aa7.49□□□□□ -1.21
NIPAL3-207ENST00000488155 TRAV8-3A0A0A6YYJ7 113 aa7.49□□□□□ -1.21
NIPAL3-207ENST00000488155 TMEM250H0YL14 139 aa7.49□□□□□ -1.21
NIPAL3-207ENST00000488155 NDUFS6O75380 124 aaKnown RBP7.49□□□□□ -1.21
NIPAL3-207ENST00000488155 S100A9P06702 114 aaKnown RBP7.49□□□□□ -1.21
NIPAL3-207ENST00000488155 RPL36AP83881 106 aaKnown RBP7.49□□□□□ -1.21
NIPAL3-207ENST00000488155 NIT1Q86X76 327 aa7.49□□□□□ -1.21
NIPAL3-207ENST00000488155 RPL36ALQ969Q0 106 aaKnown RBP7.49□□□□□ -1.21
NIPAL3-207ENST00000488155 FAM30AQ9NZY2 134 aa7.49□□□□□ -1.21
NIPAL3-207ENST00000488155 ZNF727A8MUV8 499 aa7.48□□□□□ -1.21
NIPAL3-207ENST00000488155 UBE2D3P61077 147 aa7.48□□□□□ -1.21
NIPAL3-207ENST00000488155 UBE2D2P62837 147 aa7.48□□□□□ -1.21
NIPAL3-207ENST00000488155 LINC01620Q4KN68 170 aa7.48□□□□□ -1.21
NIPAL3-207ENST00000488155 UBE2WQ96B02 151 aa7.48□□□□□ -1.21
NIPAL3-207ENST00000488155 DERL1Q9BUN8 251 aa7.48□□□□□ -1.21
NIPAL3-207ENST00000488155 MLST8Q9BVC4 326 aa7.48□□□□□ -1.21
NIPAL3-207ENST00000488155 TRBV7-3A0A075B6L6 115 aa7.47□□□□□ -1.21
NIPAL3-207ENST00000488155 A0A087WX48 190 aa7.47□□□□□ -1.21
NIPAL3-207ENST00000488155 TRBV10-1A0A0K0K1A3 114 aa7.47□□□□□ -1.21
NIPAL3-207ENST00000488155 TMEM262E9PQX1 116 aa7.47□□□□□ -1.21
NIPAL3-207ENST00000488155 F5H697 171 aa7.47□□□□□ -1.21
NIPAL3-207ENST00000488155 GZMBP10144 247 aa7.47□□□□□ -1.21
NIPAL3-207ENST00000488155 RPL35P42766 123 aaKnown RBP7.47□□□□□ -1.21
NIPAL3-207ENST00000488155 FAM74A3Q4VXF1 159 aa7.47□□□□□ -1.21
NIPAL3-207ENST00000488155 SPANXN1Q5VSR9 72 aa7.47□□□□□ -1.21
NIPAL3-207ENST00000488155 NEXN-AS1Q8NBZ9 246 aa7.47□□□□□ -1.21
NIPAL3-207ENST00000488155 SEC11CQ9BY50 192 aa7.47□□□□□ -1.21
NIPAL3-207ENST00000488155 APOC3P02656 99 aa7.46□□□□□ -1.22
NIPAL3-207ENST00000488155 RAB4BP61018 213 aa7.46□□□□□ -1.22
NIPAL3-207ENST00000488155 TMEM241Q24JQ0 296 aa7.46□□□□□ -1.22
NIPAL3-207ENST00000488155 KCNIP4Q6PIL6 250 aa7.46□□□□□ -1.22
NIPAL3-207ENST00000488155 SMIM7Q9BQ49 75 aa7.46□□□□□ -1.22
NIPAL3-207ENST00000488155 TMEM70Q9BUB7 260 aa7.46□□□□□ -1.22
NIPAL3-207ENST00000488155 TPPP3Q9BW30 176 aa7.46□□□□□ -1.22
NIPAL3-207ENST00000488155 FAM229AH3BQW9 127 aa7.45□□□□□ -1.22
NIPAL3-207ENST00000488155 SNAI2O43623 268 aa7.45□□□□□ -1.22
NIPAL3-207ENST00000488155 CENPWQ5EE01 88 aa7.45□□□□□ -1.22
NIPAL3-207ENST00000488155 C11orf52Q96A22 123 aa7.45□□□□□ -1.22
NIPAL3-207ENST00000488155 RMI2Q96E14 147 aa7.45□□□□□ -1.22
NIPAL3-207ENST00000488155 CXCL1P09341 107 aa7.44□□□□□ -1.22
NIPAL3-207ENST00000488155 OR5AL1P0C617 328 aa7.44□□□□□ -1.22
NIPAL3-207ENST00000488155 SMIM17P0DL12 118 aa7.44□□□□□ -1.22
NIPAL3-207ENST00000488155 C15orf54Q8N8G6 183 aa7.44□□□□□ -1.22
NIPAL3-207ENST00000488155 OR10G8Q8NGN5 311 aa7.44□□□□□ -1.22
NIPAL3-207ENST00000488155 SSBP4Q9BWG4 385 aaPredicted RBP7.44□□□□□ -1.22
NIPAL3-207ENST00000488155 NAT8Q9UHE5 227 aa7.44□□□□□ -1.22
NIPAL3-207ENST00000488155 CARHSP1Q9Y2V2 147 aaKnown RBP7.44□□□□□ -1.22
NIPAL3-207ENST00000488155 COX11Q9Y6N1 276 aa7.44□□□□□ -1.22
NIPAL3-207ENST00000488155 DMBT1Q9UGM3 2413 aaPredicted RBP7.44□□□□□ -1.22
NIPAL3-207ENST00000488155 TRBV6-8A0A0A6YYG3 113 aa7.43□□□□□ -1.22
NIPAL3-207ENST00000488155 IGLV2-8P01709 118 aa7.43□□□□□ -1.22
NIPAL3-207ENST00000488155 MGPP08493 103 aa7.43□□□□□ -1.22
NIPAL3-207ENST00000488155 ADCYAP1P18509 176 aa7.43□□□□□ -1.22
NIPAL3-207ENST00000488155 GNG4P50150 75 aa7.43□□□□□ -1.22
NIPAL3-207ENST00000488155 ELOBQ15370 118 aa7.43□□□□□ -1.22
NIPAL3-207ENST00000488155 MPV17L2Q567V2 206 aa7.43□□□□□ -1.22
NIPAL3-207ENST00000488155 C10orf91Q5T1B1 145 aa7.43□□□□□ -1.22
NIPAL3-207ENST00000488155 SVBPQ8N300 66 aa7.43□□□□□ -1.22
NIPAL3-207ENST00000488155 OR2D3Q8NGH3 330 aa7.43□□□□□ -1.22
NIPAL3-207ENST00000488155 DAZAP1Q96EP5 407 aaKnown RBP7.43□□□□□ -1.22
NIPAL3-207ENST00000488155 CHCHD5Q9BSY4 110 aa7.43□□□□□ -1.22
NIPAL3-207ENST00000488155 KIF25-AS1Q9Y6Z4 181 aa7.43□□□□□ -1.22
NIPAL3-207ENST00000488155 SNAPINO95295 136 aa7.42□□□□□ -1.22
NIPAL3-207ENST00000488155 CRPP02741 224 aa7.42□□□□□ -1.22
NIPAL3-207ENST00000488155 ANGP03950 147 aaKnown RBP7.42□□□□□ -1.22
NIPAL3-207ENST00000488155 ADIRFQ15847 76 aa7.42□□□□□ -1.22
NIPAL3-207ENST00000488155 ENHOQ6UWT2 76 aa7.42□□□□□ -1.22
NIPAL3-207ENST00000488155 Q8N976 141 aa7.42□□□□□ -1.22
NIPAL3-207ENST00000488155 AP1S3Q96PC3 154 aa7.42□□□□□ -1.22
NIPAL3-207ENST00000488155 CHCHD7Q9BUK0 85 aa7.42□□□□□ -1.22
NIPAL3-207ENST00000488155 SRRM2Q9UQ35 2752 aaKnown RBP7.42□□□□□ -1.22
NIPAL3-207ENST00000488155 HERC1Q15751 4861 aa7.41□□□□□ -1.22
NIPAL3-207ENST00000488155 PNRC1Q12796 327 aaPredicted RBP7.41□□□□□ -1.22
NIPAL3-207ENST00000488155 GAGE6Q13070 117 aa7.41□□□□□ -1.22
NIPAL3-207ENST00000488155 ATRAIDQ6UW56 229 aa7.41□□□□□ -1.22
NIPAL3-207ENST00000488155 CLPSL2Q6UWE3 100 aa7.41□□□□□ -1.22
NIPAL3-207ENST00000488155 NTM-AS1Q6ZSK4 140 aa7.41□□□□□ -1.22
NIPAL3-207ENST00000488155 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.41□□□□□ -1.22
NIPAL3-207ENST00000488155 FER1L6-AS1Q8NA97 138 aa7.41□□□□□ -1.22
NIPAL3-207ENST00000488155 CLRN3Q8NCR9 226 aa7.41□□□□□ -1.22
NIPAL3-207ENST00000488155 OCC1Q8TAD7 63 aa7.41□□□□□ -1.22
NIPAL3-207ENST00000488155 DEFB104AQ8WTQ1 72 aa7.41□□□□□ -1.22
NIPAL3-207ENST00000488155 C1orf43Q9BWL3 253 aa7.41□□□□□ -1.22
NIPAL3-207ENST00000488155 MYCBP2O75592 4640 aa7.4□□□□□ -1.22
NIPAL3-207ENST00000488155 C19orf71A6NCJ1 209 aa7.4□□□□□ -1.22
NIPAL3-207ENST00000488155 IGLC6P0CF74 106 aa7.4□□□□□ -1.22
NIPAL3-207ENST00000488155 RPL23P62829 140 aaKnown RBP7.4□□□□□ -1.22
NIPAL3-207ENST00000488155 Q0VG73 95 aa7.4□□□□□ -1.22
NIPAL3-207ENST00000488155 TRBV20OR9-2A0A075B6H5 130 aa7.39□□□□□ -1.23
NIPAL3-207ENST00000488155 P01737 135 aa7.39□□□□□ -1.23
NIPAL3-207ENST00000488155 HLA-DQA1P01909 254 aa7.39□□□□□ -1.23
NIPAL3-207ENST00000488155 RPS20P60866 119 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms