RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 LRTM2Q8N967 370 aa4.37□□□□□ -1.71
TNFSF4-203ENST00000488053 FER1L6-AS1Q8NA97 138 aa4.37□□□□□ -1.71
TNFSF4-203ENST00000488053 AP1S3Q96PC3 154 aa4.37□□□□□ -1.71
TNFSF4-203ENST00000488053 PSMG3Q9BT73 122 aaPredicted RBP4.37□□□□□ -1.71
TNFSF4-203ENST00000488053 SAMD10Q9BYL1 202 aa4.37□□□□□ -1.71
TNFSF4-203ENST00000488053 Q9H8V8 135 aa4.37□□□□□ -1.71
TNFSF4-203ENST00000488053 TIMM8BQ9Y5J9 83 aaPredicted RBP4.37□□□□□ -1.71
TNFSF4-203ENST00000488053 A0A087X0K7 114 aa4.36□□□□□ -1.71
TNFSF4-203ENST00000488053 SLC17A3O00476 420 aa4.36□□□□□ -1.71
TNFSF4-203ENST00000488053 ZNF253O75346 499 aa4.36□□□□□ -1.71
TNFSF4-203ENST00000488053 FUSP35637 526 aaKnown RBP eCLIP4.36□□□□□ -1.71
TNFSF4-203ENST00000488053 HINT1P49773 126 aaPredicted RBP4.36□□□□□ -1.71
TNFSF4-203ENST00000488053 CRYBA4P53673 196 aa4.36□□□□□ -1.71
TNFSF4-203ENST00000488053 Q0VG73 95 aa4.36□□□□□ -1.71
TNFSF4-203ENST00000488053 ADIRFQ15847 76 aa4.36□□□□□ -1.71
TNFSF4-203ENST00000488053 CST9LP1Q5W188 147 aa4.36□□□□□ -1.71
TNFSF4-203ENST00000488053 MRPL54Q6P161 138 aaKnown RBP4.36□□□□□ -1.71
TNFSF4-203ENST00000488053 LINC00305Q7Z4B0 112 aa4.36□□□□□ -1.71
TNFSF4-203ENST00000488053 TMEM256Q8N2U0 113 aa4.36□□□□□ -1.71
TNFSF4-203ENST00000488053 TMEM263Q8WUH6 116 aaKnown RBP4.36□□□□□ -1.71
TNFSF4-203ENST00000488053 MRAP2Q96G30 205 aa4.36□□□□□ -1.71
TNFSF4-203ENST00000488053 SMIM3Q9BZL3 60 aa4.36□□□□□ -1.71
TNFSF4-203ENST00000488053 SCRT2Q9NQ03 307 aa4.36□□□□□ -1.71
TNFSF4-203ENST00000488053 MANBALQ9NQG1 85 aa4.36□□□□□ -1.71
TNFSF4-203ENST00000488053 LSM5Q9Y4Y9 91 aaKnown RBP4.36□□□□□ -1.71
TNFSF4-203ENST00000488053 PXMP4Q9Y6I8 212 aa4.36□□□□□ -1.71
TNFSF4-203ENST00000488053 TRAV12-3A0A0B4J271 114 aa4.35□□□□□ -1.71
TNFSF4-203ENST00000488053 C17orf112F2Z3M2 114 aa4.35□□□□□ -1.71
TNFSF4-203ENST00000488053 TMEM250H0YL14 139 aa4.35□□□□□ -1.71
TNFSF4-203ENST00000488053 MRPS12O15235 138 aaKnown RBP4.35□□□□□ -1.71
TNFSF4-203ENST00000488053 BCL2P10415 239 aa4.35□□□□□ -1.71
TNFSF4-203ENST00000488053 PLP1P60201 277 aa4.35□□□□□ -1.71
TNFSF4-203ENST00000488053 ESRGQ1W209 222 aa4.35□□□□□ -1.71
TNFSF4-203ENST00000488053 LCN15Q6UWW0 184 aa4.35□□□□□ -1.71
TNFSF4-203ENST00000488053 OR5A1Q8NGJ0 315 aa4.35□□□□□ -1.71
TNFSF4-203ENST00000488053 OR10J6PQ8NGY7 276 aa4.35□□□□□ -1.71
TNFSF4-203ENST00000488053 MBD3L1Q8WWY6 194 aa4.35□□□□□ -1.71
TNFSF4-203ENST00000488053 PMCHL2Q9BQD1 86 aa4.35□□□□□ -1.71
TNFSF4-203ENST00000488053 PARLQ9H300 379 aa4.35□□□□□ -1.71
TNFSF4-203ENST00000488053 NPVFQ9HCQ7 196 aa4.35□□□□□ -1.71
TNFSF4-203ENST00000488053 FAT1Q14517 4588 aa4.35□□□□□ -1.71
TNFSF4-203ENST00000488053 TRAV5A0A0B4J249 113 aa4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 A6NDN8 102 aa4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 SNURFLB1AK76 121 aa4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 COX7A2P2O60397 106 aa4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 IFNA5P01569 189 aa4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 CRISP2P16562 243 aa4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 ATP6V0CP27449 155 aa4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 LINC01547P58512 204 aaPredicted RBP4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 TDRG1Q3Y452 100 aa4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 TTC32Q5I0X7 151 aa4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 FAM162BQ5T6X4 162 aa4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 AMMECR1LQ6DCA0 310 aa4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 TMEM14EPQ6UXP3 125 aa4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 ZNF493Q6ZR52 646 aa4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 Q6ZTI0 123 aa4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 BAGE3Q86Y29 109 aa4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 BAGE2Q86Y30 109 aa4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 OR10P1Q8NGE3 313 aa4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 BORCS7Q96B45 105 aa4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 MGST2Q99735 147 aa4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 SLC50A1Q9BRV3 221 aa4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 Q9H3A6 140 aa4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 ZNF331Q9NQX6 463 aaPredicted RBP4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 HERC1Q15751 4861 aa4.34□□□□□ -1.71
TNFSF4-203ENST00000488053 TRAV9-2A0A087WT02 112 aa4.33□□□□□ -1.72
TNFSF4-203ENST00000488053 K7EQM0 130 aa4.33□□□□□ -1.72
TNFSF4-203ENST00000488053 TAX1BP3O14907 124 aa4.33□□□□□ -1.72
TNFSF4-203ENST00000488053 PDE6DO43924 150 aa4.33□□□□□ -1.72
TNFSF4-203ENST00000488053 GPX1P07203 203 aa4.33□□□□□ -1.72
TNFSF4-203ENST00000488053 CT45A10P0DMU9 189 aa4.33□□□□□ -1.72
TNFSF4-203ENST00000488053 LINC00315P59091 139 aa4.33□□□□□ -1.72
TNFSF4-203ENST00000488053 TAS2R30P59541 319 aa4.33□□□□□ -1.72
TNFSF4-203ENST00000488053 KRTDAPP60985 99 aa4.33□□□□□ -1.72
TNFSF4-203ENST00000488053 CCL20P78556 96 aa4.33□□□□□ -1.72
TNFSF4-203ENST00000488053 OR10J3Q5JRS4 329 aa4.33□□□□□ -1.72
TNFSF4-203ENST00000488053 C10orf113Q5VZT2 155 aa4.33□□□□□ -1.72
TNFSF4-203ENST00000488053 MIC13Q5XKP0 118 aa4.33□□□□□ -1.72
TNFSF4-203ENST00000488053 FA2HQ7L5A8 372 aa4.33□□□□□ -1.72
TNFSF4-203ENST00000488053 NEGR1Q7Z3B1 354 aa4.33□□□□□ -1.72
TNFSF4-203ENST00000488053 BPIFA4PQ86YQ2 179 aa4.33□□□□□ -1.72
TNFSF4-203ENST00000488053 LINC00612Q8N6U2 182 aa4.33□□□□□ -1.72
TNFSF4-203ENST00000488053 C5orf17Q8NAS9 161 aa4.33□□□□□ -1.72
TNFSF4-203ENST00000488053 SMIM7Q9BQ49 75 aa4.33□□□□□ -1.72
TNFSF4-203ENST00000488053 GNG13Q9P2W3 67 aa4.33□□□□□ -1.72
TNFSF4-203ENST00000488053 RCL1Q9Y2P8 373 aaKnown RBP4.33□□□□□ -1.72
TNFSF4-203ENST00000488053 VPS13BQ7Z7G8 4022 aa4.33□□□□□ -1.72
TNFSF4-203ENST00000488053 TRGV2A0A075B6R0 118 aa4.32□□□□□ -1.72
TNFSF4-203ENST00000488053 A0A096LPF7 62 aa4.32□□□□□ -1.72
TNFSF4-203ENST00000488053 A0A1B0GV50 99 aa4.32□□□□□ -1.72
TNFSF4-203ENST00000488053 SMIM1B2RUZ4 78 aa4.32□□□□□ -1.72
TNFSF4-203ENST00000488053 M0R3E3 92 aa4.32□□□□□ -1.72
TNFSF4-203ENST00000488053 HMGB3O15347 200 aaKnown RBP4.32□□□□□ -1.72
TNFSF4-203ENST00000488053 TSPAN13O95857 204 aa4.32□□□□□ -1.72
TNFSF4-203ENST00000488053 IGHV3-53P01767 116 aa4.32□□□□□ -1.72
TNFSF4-203ENST00000488053 MT-ND6P03923 174 aa4.32□□□□□ -1.72
TNFSF4-203ENST00000488053 LEPP41159 167 aa4.32□□□□□ -1.72
TNFSF4-203ENST00000488053 GNG4P50150 75 aa4.32□□□□□ -1.72
TNFSF4-203ENST00000488053 RPL23P62829 140 aaKnown RBP4.32□□□□□ -1.72
TNFSF4-203ENST00000488053 SEC11AP67812 179 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms