RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 TRAV34A0A0B4J273 112 aa5.55□□□□□ -1.52
NECTIN3-209ENST00000488016 TCAPO15273 167 aa5.55□□□□□ -1.52
NECTIN3-209ENST00000488016 SPINK4O60575 86 aa5.55□□□□□ -1.52
NECTIN3-209ENST00000488016 KRTDAPP60985 99 aa5.55□□□□□ -1.52
NECTIN3-209ENST00000488016 GAGE1Q13065 139 aa5.55□□□□□ -1.52
NECTIN3-209ENST00000488016 C12orf74Q32Q52 190 aa5.55□□□□□ -1.52
NECTIN3-209ENST00000488016 COL5A1-AS1Q5SY13 56 aa5.55□□□□□ -1.52
NECTIN3-209ENST00000488016 PET117Q6UWS5 81 aa5.55□□□□□ -1.52
NECTIN3-209ENST00000488016 PHLDA1Q8WV24 401 aaPredicted RBP5.55□□□□□ -1.52
NECTIN3-209ENST00000488016 LINC00479Q96M42 142 aa5.55□□□□□ -1.52
NECTIN3-209ENST00000488016 LINC01587Q99440 93 aa5.55□□□□□ -1.52
NECTIN3-209ENST00000488016 PSG8Q9UQ74 426 aa5.55□□□□□ -1.52
NECTIN3-209ENST00000488016 GOLT1BQ9Y3E0 138 aa5.55□□□□□ -1.52
NECTIN3-209ENST00000488016 TRAV9-2A0A087WT02 112 aa5.54□□□□□ -1.52
NECTIN3-209ENST00000488016 PLAC8L1A1L4L8 177 aa5.54□□□□□ -1.52
NECTIN3-209ENST00000488016 HSBP1L1C9JCN9 74 aa5.54□□□□□ -1.52
NECTIN3-209ENST00000488016 C3orf79P0CE67 100 aa5.54□□□□□ -1.52
NECTIN3-209ENST00000488016 CDKN1BP46527 198 aa5.54□□□□□ -1.52
NECTIN3-209ENST00000488016 CAMPP49913 170 aa5.54□□□□□ -1.52
NECTIN3-209ENST00000488016 TCL1AP56279 114 aa5.54□□□□□ -1.52
NECTIN3-209ENST00000488016 KIAA1644Q3SXP7 199 aa5.54□□□□□ -1.52
NECTIN3-209ENST00000488016 FAM222AQ5U5X8 452 aa5.54□□□□□ -1.52
NECTIN3-209ENST00000488016 PRR27Q6MZM9 219 aa5.54□□□□□ -1.52
NECTIN3-209ENST00000488016 OR2D3Q8NGH3 330 aa5.54□□□□□ -1.52
NECTIN3-209ENST00000488016 MRPL53Q96EL3 112 aaKnown RBP5.54□□□□□ -1.52
NECTIN3-209ENST00000488016 PMCHL2Q9BQD1 86 aa5.54□□□□□ -1.52
NECTIN3-209ENST00000488016 TMEM70Q9BUB7 260 aa5.54□□□□□ -1.52
NECTIN3-209ENST00000488016 MAP1LC3CQ9BXW4 147 aa5.54□□□□□ -1.52
NECTIN3-209ENST00000488016 TMEM191AQ9H0A3 160 aa5.54□□□□□ -1.52
NECTIN3-209ENST00000488016 DYNC1H1Q14204 4646 aaKnown RBP5.54□□□□□ -1.52
NECTIN3-209ENST00000488016 A0A1B0GV90 55 aa5.53□□□□□ -1.52
NECTIN3-209ENST00000488016 F2Z2F3 143 aa5.53□□□□□ -1.52
NECTIN3-209ENST00000488016 RNASE4P34096 147 aaKnown RBP5.53□□□□□ -1.52
NECTIN3-209ENST00000488016 SLAQ13239 276 aa5.53□□□□□ -1.52
NECTIN3-209ENST00000488016 RRN3P1Q2M238 152 aa5.53□□□□□ -1.52
NECTIN3-209ENST00000488016 SPATA45Q537H7 98 aa5.53□□□□□ -1.52
NECTIN3-209ENST00000488016 CEMP1Q6PRD7 247 aaPredicted RBP5.53□□□□□ -1.52
NECTIN3-209ENST00000488016 ZNF493Q6ZR52 646 aa5.53□□□□□ -1.52
NECTIN3-209ENST00000488016 GOLT1AQ6ZVE7 132 aa5.53□□□□□ -1.52
NECTIN3-209ENST00000488016 SPATA12Q7Z6I5 190 aa5.53□□□□□ -1.52
NECTIN3-209ENST00000488016 PRNTQ86SH4 94 aa5.53□□□□□ -1.52
NECTIN3-209ENST00000488016 ZFAND2AQ8N6M9 145 aa5.53□□□□□ -1.52
NECTIN3-209ENST00000488016 FAM19A4Q96LR4 140 aa5.53□□□□□ -1.52
NECTIN3-209ENST00000488016 TMEM189A5PLL7 270 aa5.52□□□□□ -1.53
NECTIN3-209ENST00000488016 RBAKDNA6NC62 111 aa5.52□□□□□ -1.53
NECTIN3-209ENST00000488016 FABP5P3A8MUU1 101 aa5.52□□□□□ -1.53
NECTIN3-209ENST00000488016 KLLNB2CW77 178 aa5.52□□□□□ -1.53
NECTIN3-209ENST00000488016 LEPROTL1O95214 131 aa5.52□□□□□ -1.53
NECTIN3-209ENST00000488016 PPBPP02775 128 aa5.52□□□□□ -1.53
NECTIN3-209ENST00000488016 IGLC3P0DOY3 106 aa5.52□□□□□ -1.53
NECTIN3-209ENST00000488016 HTN3P15516 51 aa5.52□□□□□ -1.53
NECTIN3-209ENST00000488016 NTF3P20783 257 aa5.52□□□□□ -1.53
NECTIN3-209ENST00000488016 CTRLP40313 264 aa5.52□□□□□ -1.53
NECTIN3-209ENST00000488016 LEPP41159 167 aa5.52□□□□□ -1.53
NECTIN3-209ENST00000488016 TMEM78Q5T7P6 136 aa5.52□□□□□ -1.53
NECTIN3-209ENST00000488016 C9orf47Q6ZRZ4 202 aa5.52□□□□□ -1.53
NECTIN3-209ENST00000488016 Q86TA4 180 aa5.52□□□□□ -1.53
NECTIN3-209ENST00000488016 PGLYRP4Q96LB8 373 aa5.52□□□□□ -1.53
NECTIN3-209ENST00000488016 SNHG12Q9BXW3 62 aa5.52□□□□□ -1.53
NECTIN3-209ENST00000488016 ST20Q9HBF5 79 aa5.52□□□□□ -1.53
NECTIN3-209ENST00000488016 LAMTOR2Q9Y2Q5 125 aa5.52□□□□□ -1.53
NECTIN3-209ENST00000488016 PAM16Q9Y3D7 125 aa5.52□□□□□ -1.53
NECTIN3-209ENST00000488016 C7orf71A4D174 169 aa5.51□□□□□ -1.53
NECTIN3-209ENST00000488016 NUPR2A6NF83 97 aa5.51□□□□□ -1.53
NECTIN3-209ENST00000488016 IGLL5B9A064 214 aa5.51□□□□□ -1.53
NECTIN3-209ENST00000488016 IGLV2-11P01706 119 aa5.51□□□□□ -1.53
NECTIN3-209ENST00000488016 ZNF138P52744 262 aa5.51□□□□□ -1.53
NECTIN3-209ENST00000488016 MUC21Q5SSG8 566 aa5.51□□□□□ -1.53
NECTIN3-209ENST00000488016 PRSS3P2Q8NHM4 247 aa5.51□□□□□ -1.53
NECTIN3-209ENST00000488016 GTSF1Q8WW33 167 aa5.51□□□□□ -1.53
NECTIN3-209ENST00000488016 NOP10Q9NPE3 64 aaKnown RBP5.51□□□□□ -1.53
NECTIN3-209ENST00000488016 SMIM9A6NGZ8 99 aa5.5□□□□□ -1.53
NECTIN3-209ENST00000488016 SYS1-DBNDD2H3BUS1 97 aa5.5□□□□□ -1.53
NECTIN3-209ENST00000488016 SPART-AS1P0CW21 52 aa5.5□□□□□ -1.53
NECTIN3-209ENST00000488016 DEFB130BP0DP73 79 aa5.5□□□□□ -1.53
NECTIN3-209ENST00000488016 DEFB130AP0DP74 79 aa5.5□□□□□ -1.53
NECTIN3-209ENST00000488016 TSPOP30536 169 aa5.5□□□□□ -1.53
NECTIN3-209ENST00000488016 HNRNPA3P51991 378 aaKnown RBP5.5□□□□□ -1.53
NECTIN3-209ENST00000488016 RNASEKQ6P5S7 137 aaKnown RBP5.5□□□□□ -1.53
NECTIN3-209ENST00000488016 Q6ZN92 141 aa5.5□□□□□ -1.53
NECTIN3-209ENST00000488016 FA2HQ7L5A8 372 aa5.5□□□□□ -1.53
NECTIN3-209ENST00000488016 FAM19A2Q8N3H0 131 aa5.5□□□□□ -1.53
NECTIN3-209ENST00000488016 Q8N976 141 aa5.5□□□□□ -1.53
NECTIN3-209ENST00000488016 OR10AG1Q8NH19 301 aa5.5□□□□□ -1.53
NECTIN3-209ENST00000488016 RNASE8Q8TDE3 154 aaKnown RBP5.5□□□□□ -1.53
NECTIN3-209ENST00000488016 LINC00477Q96M19 166 aa5.5□□□□□ -1.53
NECTIN3-209ENST00000488016 ODF3Q96PU9 254 aa5.5□□□□□ -1.53
NECTIN3-209ENST00000488016 LENEPQ9Y5L5 61 aa5.5□□□□□ -1.53
NECTIN3-209ENST00000488016 IGHV4-4A0A075B6R2 117 aa5.49□□□□□ -1.53
NECTIN3-209ENST00000488016 DEFB131BA0A096LNP1 70 aa5.49□□□□□ -1.53
NECTIN3-209ENST00000488016 TRAV10A0A0B4J240 114 aa5.49□□□□□ -1.53
NECTIN3-209ENST00000488016 LY6G6CO95867 125 aa5.49□□□□□ -1.53
NECTIN3-209ENST00000488016 ZNF80P51504 273 aaPredicted RBP5.49□□□□□ -1.53
NECTIN3-209ENST00000488016 DAD1P61803 113 aa5.49□□□□□ -1.53
NECTIN3-209ENST00000488016 FAM104BQ5XKR9 115 aa5.49□□□□□ -1.53
NECTIN3-209ENST00000488016 SMIM15Q7Z3B0 74 aa5.49□□□□□ -1.53
NECTIN3-209ENST00000488016 TMEM263Q8WUH6 116 aaKnown RBP5.49□□□□□ -1.53
NECTIN3-209ENST00000488016 ORAOV1Q8WV07 137 aa5.49□□□□□ -1.53
NECTIN3-209ENST00000488016 C16orf74Q96GX8 76 aa5.49□□□□□ -1.53
NECTIN3-209ENST00000488016 APLNQ9ULZ1 77 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms