RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 ANKHD1Q8IWZ3 2542 aaKnown RBP11.56□□□□□ -0.56
HLA-DQB1-209ENST00000487676 COX7A2LO14548 114 aa11.56□□□□□ -0.56
HLA-DQB1-209ENST00000487676 LST1O00453 97 aa11.56□□□□□ -0.56
HLA-DQB1-209ENST00000487676 UCNP55089 124 aa11.56□□□□□ -0.56
HLA-DQB1-209ENST00000487676 ZFAND3Q9H8U3 227 aa11.56□□□□□ -0.56
HLA-DQB1-209ENST00000487676 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.56□□□□□ -0.56
HLA-DQB1-209ENST00000487676 IGKV2-29A2NJV5 120 aaPredicted RBP11.56□□□□□ -0.56
HLA-DQB1-209ENST00000487676 H7C423 109 aa11.56□□□□□ -0.56
HLA-DQB1-209ENST00000487676 BRD3OSQ6XYD6 125 aa11.56□□□□□ -0.56
HLA-DQB1-209ENST00000487676 ZFAND2AQ8N6M9 145 aa11.56□□□□□ -0.56
HLA-DQB1-209ENST00000487676 C11orf68Q9H3H3 251 aaKnown RBP11.56□□□□□ -0.56
HLA-DQB1-209ENST00000487676 IGHV4OR15-8A0A075B7B6 117 aa11.55□□□□□ -0.56
HLA-DQB1-209ENST00000487676 A0A087WW49 117 aa11.55□□□□□ -0.56
HLA-DQB1-209ENST00000487676 TINCRA0A1B0GVN0 87 aa11.55□□□□□ -0.56
HLA-DQB1-209ENST00000487676 IGF1P05019 195 aa11.55□□□□□ -0.56
HLA-DQB1-209ENST00000487676 CEP192Q8TEP8 1941 aa11.55□□□□□ -0.56
HLA-DQB1-209ENST00000487676 LY6LH3BQJ8 138 aa11.55□□□□□ -0.56
HLA-DQB1-209ENST00000487676 TRGV2A0A075B6R0 118 aa11.55□□□□□ -0.56
HLA-DQB1-209ENST00000487676 GHRHP01286 108 aa11.55□□□□□ -0.56
HLA-DQB1-209ENST00000487676 LRRC75A-AS1Q8N1F1 130 aa11.55□□□□□ -0.56
HLA-DQB1-209ENST00000487676 PSMG3-AS1Q96PY0 264 aa11.55□□□□□ -0.56
HLA-DQB1-209ENST00000487676 DAZ2Q13117 558 aaKnown RBP11.54□□□□□ -0.56
HLA-DQB1-209ENST00000487676 NSUN5P1Q3KNT7 163 aa11.54□□□□□ -0.56
HLA-DQB1-209ENST00000487676 DAZ4Q86SG3 579 aaKnown RBP11.54□□□□□ -0.56
HLA-DQB1-209ENST00000487676 DAZ3Q9NR90 486 aaKnown RBP11.54□□□□□ -0.56
HLA-DQB1-209ENST00000487676 TRBV27A0A0K0K1C4 114 aa11.54□□□□□ -0.56
HLA-DQB1-209ENST00000487676 CCDC140Q96MF4 163 aa11.54□□□□□ -0.56
HLA-DQB1-209ENST00000487676 H0YGX0 51 aa11.54□□□□□ -0.56
HLA-DQB1-209ENST00000487676 LINC00694P0DN24 101 aa11.54□□□□□ -0.56
HLA-DQB1-209ENST00000487676 POLR2KP53803 58 aaKnown RBP11.54□□□□□ -0.56
HLA-DQB1-209ENST00000487676 ZNRF2Q8NHG8 242 aa11.54□□□□□ -0.56
HLA-DQB1-209ENST00000487676 IGIPA6NJ69 53 aa11.53□□□□□ -0.56
HLA-DQB1-209ENST00000487676 C22orf34Q6ZV56 151 aa11.53□□□□□ -0.56
HLA-DQB1-209ENST00000487676 HOXD3P31249 432 aaPredicted RBP11.53□□□□□ -0.56
HLA-DQB1-209ENST00000487676 C6orf226Q5I0X4 101 aa11.53□□□□□ -0.56
HLA-DQB1-209ENST00000487676 TRGV1A0A0A0MS02 117 aa11.53□□□□□ -0.56
HLA-DQB1-209ENST00000487676 IGHV3-16A0A0C4DH30 117 aa11.53□□□□□ -0.56
HLA-DQB1-209ENST00000487676 LAMTOR3Q9UHA4 124 aa11.53□□□□□ -0.56
HLA-DQB1-209ENST00000487676 CACNA1AO00555 2505 aa11.52□□□□□ -0.56
HLA-DQB1-209ENST00000487676 IGLV4-3A0A075B6K6 122 aa11.52□□□□□ -0.56
HLA-DQB1-209ENST00000487676 COX7CP15954 63 aa11.52□□□□□ -0.56
HLA-DQB1-209ENST00000487676 ACACBO00763 2458 aa11.52□□□□□ -0.57
HLA-DQB1-209ENST00000487676 IGLV4-69A0A075B6H9 119 aa11.52□□□□□ -0.57
HLA-DQB1-209ENST00000487676 hADV29S1A0JD25 119 aa11.52□□□□□ -0.57
HLA-DQB1-209ENST00000487676 H3BUA1 57 aa11.52□□□□□ -0.57
HLA-DQB1-209ENST00000487676 FAM208BQ5VWN6 2430 aa11.51□□□□□ -0.57
HLA-DQB1-209ENST00000487676 A0A0J9YX75 114 aa11.51□□□□□ -0.57
HLA-DQB1-209ENST00000487676 TRBV6-5A0A0K0K1A5 114 aa11.51□□□□□ -0.57
HLA-DQB1-209ENST00000487676 DEFB131AP59861 70 aa11.51□□□□□ -0.57
HLA-DQB1-209ENST00000487676 VSIG2Q96IQ7 327 aa11.51□□□□□ -0.57
HLA-DQB1-209ENST00000487676 TMEM243Q9BU79 118 aa11.51□□□□□ -0.57
HLA-DQB1-209ENST00000487676 TMEM61Q8N0U2 210 aa11.51□□□□□ -0.57
HLA-DQB1-209ENST00000487676 TSPEAR-AS2P59090 65 aa11.5□□□□□ -0.57
HLA-DQB1-209ENST00000487676 PRR9Q5T870 116 aa11.5□□□□□ -0.57
HLA-DQB1-209ENST00000487676 SBSPONQ8IVN8 264 aa11.5□□□□□ -0.57
HLA-DQB1-209ENST00000487676 INSP01308 110 aa11.5□□□□□ -0.57
HLA-DQB1-209ENST00000487676 PFN2P35080 140 aa11.5□□□□□ -0.57
HLA-DQB1-209ENST00000487676 ATP5J2P56134 94 aa11.5□□□□□ -0.57
HLA-DQB1-209ENST00000487676 MRGPRG-AS1Q2M3A8 158 aa11.5□□□□□ -0.57
HLA-DQB1-209ENST00000487676 BPESC1Q9GZL8 116 aa11.5□□□□□ -0.57
HLA-DQB1-209ENST00000487676 VPREB3Q9UKI3 123 aa11.5□□□□□ -0.57
HLA-DQB1-209ENST00000487676 MALP21145 153 aa11.49□□□□□ -0.57
HLA-DQB1-209ENST00000487676 STHQ8IWL8 128 aa11.49□□□□□ -0.57
HLA-DQB1-209ENST00000487676 ORMDL1Q9P0S3 153 aa11.49□□□□□ -0.57
HLA-DQB1-209ENST00000487676 COX6B1P14854 86 aa11.49□□□□□ -0.57
HLA-DQB1-209ENST00000487676 C20orf173Q96LM9 149 aa11.49□□□□□ -0.57
HLA-DQB1-209ENST00000487676 ODF3BA8MYP8 253 aa11.49□□□□□ -0.57
HLA-DQB1-209ENST00000487676 IGHV3-53P01767 116 aa11.49□□□□□ -0.57
HLA-DQB1-209ENST00000487676 RNASE3P12724 160 aaKnown RBP11.48□□□□□ -0.57
HLA-DQB1-209ENST00000487676 C1orf43Q9BWL3 253 aa11.48□□□□□ -0.57
HLA-DQB1-209ENST00000487676 UNQ9165/PRO28630Q6UXU0 137 aa11.48□□□□□ -0.57
HLA-DQB1-209ENST00000487676 SND1-IT1Q9HBX3 110 aa11.48□□□□□ -0.57
HLA-DQB1-209ENST00000487676 UTRNP46939 3433 aa11.48□□□□□ -0.57
HLA-DQB1-209ENST00000487676 TMEM258P61165 79 aa11.48□□□□□ -0.57
HLA-DQB1-209ENST00000487676 PLA2G2CQ5R387 149 aa11.48□□□□□ -0.57
HLA-DQB1-209ENST00000487676 LINC00526Q96FQ7 95 aa11.48□□□□□ -0.57
HLA-DQB1-209ENST00000487676 MYO18BQ8IUG5 2567 aa11.48□□□□□ -0.57
HLA-DQB1-209ENST00000487676 NACAE9PAV3 2078 aa11.48□□□□□ -0.57
HLA-DQB1-209ENST00000487676 TRGV4A0A0C4DH28 118 aa11.48□□□□□ -0.57
HLA-DQB1-209ENST00000487676 SMIM9A6NGZ8 99 aa11.48□□□□□ -0.57
HLA-DQB1-209ENST00000487676 CEMP1Q6PRD7 247 aaPredicted RBP11.48□□□□□ -0.57
HLA-DQB1-209ENST00000487676 PF4P02776 101 aa11.47□□□□□ -0.57
HLA-DQB1-209ENST00000487676 PTPRBP23467 1997 aa11.47□□□□□ -0.57
HLA-DQB1-209ENST00000487676 CXCL5P42830 114 aa11.47□□□□□ -0.57
HLA-DQB1-209ENST00000487676 M0QY20 66 aa11.47□□□□□ -0.57
HLA-DQB1-209ENST00000487676 HAMPP81172 84 aa11.47□□□□□ -0.57
HLA-DQB1-209ENST00000487676 ODF3Q96PU9 254 aa11.47□□□□□ -0.57
HLA-DQB1-209ENST00000487676 SDIM1Q6ZPB5 146 aa11.47□□□□□ -0.57
HLA-DQB1-209ENST00000487676 Q9HAA7 133 aa11.47□□□□□ -0.57
HLA-DQB1-209ENST00000487676 PTPRQQ9UMZ3 2332 aa11.46□□□□□ -0.57
HLA-DQB1-209ENST00000487676 TIMM17BO60830 172 aa11.46□□□□□ -0.58
HLA-DQB1-209ENST00000487676 C5orf56Q8N8D9 126 aa11.46□□□□□ -0.58
HLA-DQB1-209ENST00000487676 EBI3Q14213 229 aa11.45□□□□□ -0.58
HLA-DQB1-209ENST00000487676 HIST2H2BCQ6DN03 193 aa11.45□□□□□ -0.58
HLA-DQB1-209ENST00000487676 HIST2H2BDQ6DRA6 164 aa11.45□□□□□ -0.58
HLA-DQB1-209ENST00000487676 PPDPFQ9H3Y8 114 aa11.45□□□□□ -0.58
HLA-DQB1-209ENST00000487676 TNFRSF13BO14836 293 aaPredicted RBP11.45□□□□□ -0.58
HLA-DQB1-209ENST00000487676 LINC00308Q8TCZ7 52 aa11.45□□□□□ -0.58
HLA-DQB1-209ENST00000487676 GPHB5Q86YW7 130 aa11.45□□□□□ -0.58
HLA-DQB1-209ENST00000487676 SERP2Q8N6R1 65 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms