RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 AKR1C3P42330 323 aa7.99□□□□□ -1.13
VPS16-208ENST00000487461 RPL36AP83881 106 aaKnown RBP7.99□□□□□ -1.13
VPS16-208ENST00000487461 LINC00528Q8N1L1 170 aa7.99□□□□□ -1.13
VPS16-208ENST00000487461 RPL36ALQ969Q0 106 aaKnown RBP7.99□□□□□ -1.13
VPS16-208ENST00000487461 A0A087WX48 190 aa7.98□□□□□ -1.13
VPS16-208ENST00000487461 J3QL48 77 aa7.98□□□□□ -1.13
VPS16-208ENST00000487461 RPL19P84098 196 aaKnown RBP7.98□□□□□ -1.13
VPS16-208ENST00000487461 ATRAIDQ6UW56 229 aa7.98□□□□□ -1.13
VPS16-208ENST00000487461 OR10G8Q8NGN5 311 aa7.98□□□□□ -1.13
VPS16-208ENST00000487461 MBD3L1Q8WWY6 194 aa7.98□□□□□ -1.13
VPS16-208ENST00000487461 CHCHD7Q9BUK0 85 aa7.98□□□□□ -1.13
VPS16-208ENST00000487461 UMAD1C9J7I0 102 aa7.97□□□□□ -1.13
VPS16-208ENST00000487461 TMEM262E9PQX1 116 aa7.97□□□□□ -1.13
VPS16-208ENST00000487461 F8W036 122 aa7.97□□□□□ -1.13
VPS16-208ENST00000487461 RAB4BP61018 213 aa7.97□□□□□ -1.13
VPS16-208ENST00000487461 PEA15Q15121 130 aa7.97□□□□□ -1.13
VPS16-208ENST00000487461 ELOBQ15370 118 aa7.97□□□□□ -1.13
VPS16-208ENST00000487461 ENHOQ6UWT2 76 aa7.97□□□□□ -1.13
VPS16-208ENST00000487461 SCXQ7RTU7 201 aa7.97□□□□□ -1.13
VPS16-208ENST00000487461 NEXN-AS1Q8NBZ9 246 aa7.97□□□□□ -1.13
VPS16-208ENST00000487461 CLRN3Q8NCR9 226 aa7.97□□□□□ -1.13
VPS16-208ENST00000487461 OR10AG1Q8NH19 301 aa7.97□□□□□ -1.13
VPS16-208ENST00000487461 SFT2D1Q8WV19 159 aa7.97□□□□□ -1.13
VPS16-208ENST00000487461 MLST8Q9BVC4 326 aa7.97□□□□□ -1.13
VPS16-208ENST00000487461 TRBV6-8A0A0A6YYG3 113 aa7.96□□□□□ -1.14
VPS16-208ENST00000487461 MUC21A0A0G2JKD1 596 aa7.96□□□□□ -1.14
VPS16-208ENST00000487461 MUC21A0A140T8X8 626 aa7.96□□□□□ -1.14
VPS16-208ENST00000487461 A0A1B0GV50 99 aa7.96□□□□□ -1.14
VPS16-208ENST00000487461 SCO2A0A1W2PP80 73 aa7.96□□□□□ -1.14
VPS16-208ENST00000487461 S100A9P06702 114 aaKnown RBP7.96□□□□□ -1.14
VPS16-208ENST00000487461 Q0VG73 95 aa7.96□□□□□ -1.14
VPS16-208ENST00000487461 PRR27Q6MZM9 219 aa7.96□□□□□ -1.14
VPS16-208ENST00000487461 KCNIP4Q6PIL6 250 aa7.96□□□□□ -1.14
VPS16-208ENST00000487461 BAGE2Q86Y30 109 aa7.96□□□□□ -1.14
VPS16-208ENST00000487461 CHAC1Q9BUX1 264 aa7.96□□□□□ -1.14
VPS16-208ENST00000487461 SSBP4Q9BWG4 385 aaPredicted RBP7.96□□□□□ -1.14
VPS16-208ENST00000487461 KRTAP29-1A8MX34 341 aaPredicted RBP7.95□□□□□ -1.14
VPS16-208ENST00000487461 CXCL1P09341 107 aa7.95□□□□□ -1.14
VPS16-208ENST00000487461 ADCYAP1P18509 176 aa7.95□□□□□ -1.14
VPS16-208ENST00000487461 C15orf54Q8N8G6 183 aa7.95□□□□□ -1.14
VPS16-208ENST00000487461 FAM213BQ8TBF2 198 aa7.95□□□□□ -1.14
VPS16-208ENST00000487461 DEFB104AQ8WTQ1 72 aa7.95□□□□□ -1.14
VPS16-208ENST00000487461 SNAI2O43623 268 aa7.94□□□□□ -1.14
VPS16-208ENST00000487461 KRTAP10-4P60372 401 aaPredicted RBP7.94□□□□□ -1.14
VPS16-208ENST00000487461 SSTP61278 116 aa7.94□□□□□ -1.14
VPS16-208ENST00000487461 SRSF3P84103 164 aaKnown RBP7.94□□□□□ -1.14
VPS16-208ENST00000487461 ZNF56Q15929 161 aa7.94□□□□□ -1.14
VPS16-208ENST00000487461 MPV17L2Q567V2 206 aa7.94□□□□□ -1.14
VPS16-208ENST00000487461 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.94□□□□□ -1.14
VPS16-208ENST00000487461 CIRBP-AS1Q8TBR5 109 aa7.94□□□□□ -1.14
VPS16-208ENST00000487461 OR5AL1P0C617 328 aa7.93□□□□□ -1.14
VPS16-208ENST00000487461 SPANXN1Q5VSR9 72 aa7.93□□□□□ -1.14
VPS16-208ENST00000487461 NTM-AS1Q6ZSK4 140 aa7.93□□□□□ -1.14
VPS16-208ENST00000487461 C1orf43Q9BWL3 253 aa7.93□□□□□ -1.14
VPS16-208ENST00000487461 KIF25-AS1Q9Y6Z4 181 aa7.93□□□□□ -1.14
VPS16-208ENST00000487461 TRAV1-1A0A0B4J248 108 aa7.92□□□□□ -1.14
VPS16-208ENST00000487461 F5H697 171 aa7.92□□□□□ -1.14
VPS16-208ENST00000487461 ANGP03950 147 aaKnown RBP7.92□□□□□ -1.14
VPS16-208ENST00000487461 FAM74A3Q4VXF1 159 aa7.92□□□□□ -1.14
VPS16-208ENST00000487461 CHCHD5Q9BSY4 110 aa7.92□□□□□ -1.14
VPS16-208ENST00000487461 NDUFS6O75380 124 aaKnown RBP7.91□□□□□ -1.14
VPS16-208ENST00000487461 CRPP02741 224 aa7.91□□□□□ -1.14
VPS16-208ENST00000487461 RPL35P42766 123 aaKnown RBP7.91□□□□□ -1.14
VPS16-208ENST00000487461 CCL20P78556 96 aa7.91□□□□□ -1.14
VPS16-208ENST00000487461 C14orf177Q52M58 125 aa7.91□□□□□ -1.14
VPS16-208ENST00000487461 SMCO4Q9NRQ5 59 aa7.91□□□□□ -1.14
VPS16-208ENST00000487461 VAX2Q9UIW0 290 aa7.91□□□□□ -1.14
VPS16-208ENST00000487461 USP17L23D6RBM5 183 aa7.9□□□□□ -1.14
VPS16-208ENST00000487461 KRTAP26-1Q6PEX3 210 aa7.9□□□□□ -1.14
VPS16-208ENST00000487461 DERL1Q9BUN8 251 aa7.9□□□□□ -1.14
VPS16-208ENST00000487461 C9JQL5 133 aa7.89□□□□□ -1.15
VPS16-208ENST00000487461 PRSS1P07477 247 aa7.89□□□□□ -1.15
VPS16-208ENST00000487461 GZMBP10144 247 aa7.89□□□□□ -1.15
VPS16-208ENST00000487461 PKIAP61925 76 aa7.89□□□□□ -1.15
VPS16-208ENST00000487461 RBX1P62877 108 aa7.89□□□□□ -1.15
VPS16-208ENST00000487461 GAGE6Q13070 117 aa7.89□□□□□ -1.15
VPS16-208ENST00000487461 MIAQ16674 131 aa7.89□□□□□ -1.15
VPS16-208ENST00000487461 TMEM97Q5BJF2 176 aa7.89□□□□□ -1.15
VPS16-208ENST00000487461 PRR34Q9NV39 138 aa7.89□□□□□ -1.15
VPS16-208ENST00000487461 LRP1Q07954 4544 aaKnown RBP7.88□□□□□ -1.15
VPS16-208ENST00000487461 M0QY20 66 aa7.88□□□□□ -1.15
VPS16-208ENST00000487461 IGLV2-8P01709 118 aa7.88□□□□□ -1.15
VPS16-208ENST00000487461 HLA-DQA1P01909 254 aa7.88□□□□□ -1.15
VPS16-208ENST00000487461 SMIM17P0DL12 118 aa7.88□□□□□ -1.15
VPS16-208ENST00000487461 RHEBQ15382 184 aa7.88□□□□□ -1.15
VPS16-208ENST00000487461 CLPSL2Q6UWE3 100 aa7.88□□□□□ -1.15
VPS16-208ENST00000487461 LINC00269Q8N2A0 174 aa7.88□□□□□ -1.15
VPS16-208ENST00000487461 C11orf52Q96A22 123 aa7.88□□□□□ -1.15
VPS16-208ENST00000487461 GNG13Q9P2W3 67 aa7.88□□□□□ -1.15
VPS16-208ENST00000487461 UBR4Q5T4S7 5183 aa7.87□□□□□ -1.15
VPS16-208ENST00000487461 TRBV25-1A0A075B6N4 114 aa7.87□□□□□ -1.15
VPS16-208ENST00000487461 COLCA2A8K830 154 aa7.87□□□□□ -1.15
VPS16-208ENST00000487461 MT-ND4LP03901 98 aa7.87□□□□□ -1.15
VPS16-208ENST00000487461 IGLC6P0CF74 106 aa7.87□□□□□ -1.15
VPS16-208ENST00000487461 IQCJQ1A5X6 159 aa7.87□□□□□ -1.15
VPS16-208ENST00000487461 DGAT2L7PQ6IED9 249 aa7.87□□□□□ -1.15
VPS16-208ENST00000487461 AP1S3Q96PC3 154 aa7.87□□□□□ -1.15
VPS16-208ENST00000487461 TPPP3Q9BW30 176 aa7.87□□□□□ -1.15
VPS16-208ENST00000487461 EIF5A2Q9GZV4 153 aaKnown RBP7.87□□□□□ -1.15
VPS16-208ENST00000487461 C19orf71A6NCJ1 209 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms