RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 RBAKDNA6NC62 111 aa7.83□□□□□ -1.16
TRIM56-204ENST00000487252 RS1O15537 224 aa7.83□□□□□ -1.16
TRIM56-204ENST00000487252 DEFB1P60022 68 aa7.83□□□□□ -1.16
TRIM56-204ENST00000487252 IQCJQ1A5X6 159 aa7.83□□□□□ -1.16
TRIM56-204ENST00000487252 Q6AWC8 147 aa7.83□□□□□ -1.16
TRIM56-204ENST00000487252 MRPL53Q96EL3 112 aaKnown RBP7.83□□□□□ -1.16
TRIM56-204ENST00000487252 KCNS1Q96KK3 526 aa7.83□□□□□ -1.16
TRIM56-204ENST00000487252 PGLYRP4Q96LB8 373 aa7.83□□□□□ -1.16
TRIM56-204ENST00000487252 SLC50A1Q9BRV3 221 aa7.83□□□□□ -1.16
TRIM56-204ENST00000487252 FOXI2Q6ZQN5 318 aa7.82□□□□□ -1.16
TRIM56-204ENST00000487252 C8orf49Q96NF6 230 aa7.82□□□□□ -1.16
TRIM56-204ENST00000487252 NRN1Q9NPD7 142 aa7.82□□□□□ -1.16
TRIM56-204ENST00000487252 NAGKQ9UJ70 344 aa7.82□□□□□ -1.16
TRIM56-204ENST00000487252 IGKV2-40A0A087WW87 121 aaPredicted RBP7.81□□□□□ -1.16
TRIM56-204ENST00000487252 TRAV8-2A0A0B4J237 113 aa7.81□□□□□ -1.16
TRIM56-204ENST00000487252 A0A1B0GUT8 65 aa7.81□□□□□ -1.16
TRIM56-204ENST00000487252 A8MTW9 85 aa7.81□□□□□ -1.16
TRIM56-204ENST00000487252 ZNF324O75467 553 aaPredicted RBP7.81□□□□□ -1.16
TRIM56-204ENST00000487252 IGKV2D-40P01614 121 aaPredicted RBP7.81□□□□□ -1.16
TRIM56-204ENST00000487252 CT45A10P0DMU9 189 aa7.81□□□□□ -1.16
TRIM56-204ENST00000487252 CAMPP49913 170 aa7.81□□□□□ -1.16
TRIM56-204ENST00000487252 HNRNPA3P51991 378 aaKnown RBP7.81□□□□□ -1.16
TRIM56-204ENST00000487252 FAM162BQ5T6X4 162 aa7.81□□□□□ -1.16
TRIM56-204ENST00000487252 ZNF664Q8N3J9 261 aa7.81□□□□□ -1.16
TRIM56-204ENST00000487252 NDFIP1Q9BT67 221 aa7.81□□□□□ -1.16
TRIM56-204ENST00000487252 PPP1R14DQ9NXH3 145 aa7.81□□□□□ -1.16
TRIM56-204ENST00000487252 A0A0J9YY99 117 aa7.8□□□□□ -1.16
TRIM56-204ENST00000487252 TSTD3H0UI37 97 aa7.8□□□□□ -1.16
TRIM56-204ENST00000487252 SH2D1AO60880 128 aa7.8□□□□□ -1.16
TRIM56-204ENST00000487252 DDTP30046 118 aa7.8□□□□□ -1.16
TRIM56-204ENST00000487252 RPS20P60866 119 aaKnown RBP7.8□□□□□ -1.16
TRIM56-204ENST00000487252 RIGQ13278 110 aa7.8□□□□□ -1.16
TRIM56-204ENST00000487252 TEX43Q6ZNM6 134 aa7.8□□□□□ -1.16
TRIM56-204ENST00000487252 ZNF493Q6ZR52 646 aa7.8□□□□□ -1.16
TRIM56-204ENST00000487252 SCXQ7RTU7 201 aa7.8□□□□□ -1.16
TRIM56-204ENST00000487252 NIT1Q86X76 327 aa7.8□□□□□ -1.16
TRIM56-204ENST00000487252 Q8N976 141 aa7.8□□□□□ -1.16
TRIM56-204ENST00000487252 VGLL1Q99990 258 aa7.8□□□□□ -1.16
TRIM56-204ENST00000487252 SSBP4Q9BWG4 385 aaPredicted RBP7.8□□□□□ -1.16
TRIM56-204ENST00000487252 A0A096LPF7 62 aa7.79□□□□□ -1.16
TRIM56-204ENST00000487252 SCGB1D1O95968 90 aa7.79□□□□□ -1.16
TRIM56-204ENST00000487252 AZU1P20160 251 aa7.79□□□□□ -1.16
TRIM56-204ENST00000487252 AMTNQ6UX39 209 aa7.79□□□□□ -1.16
TRIM56-204ENST00000487252 LINC00612Q8N6U2 182 aa7.79□□□□□ -1.16
TRIM56-204ENST00000487252 Q8N814 137 aa7.79□□□□□ -1.16
TRIM56-204ENST00000487252 URB1-AS1Q96HZ7 61 aa7.79□□□□□ -1.16
TRIM56-204ENST00000487252 SAMD10Q9BYL1 202 aa7.79□□□□□ -1.16
TRIM56-204ENST00000487252 MSRB1Q9NZV6 116 aa7.79□□□□□ -1.16
TRIM56-204ENST00000487252 PRAC2D3DTV9 90 aa7.78□□□□□ -1.16
TRIM56-204ENST00000487252 K7EP13 123 aa7.78□□□□□ -1.16
TRIM56-204ENST00000487252 CRXO43186 299 aaPredicted RBP7.78□□□□□ -1.16
TRIM56-204ENST00000487252 NXPH4O95158 308 aa7.78□□□□□ -1.16
TRIM56-204ENST00000487252 ARMS2P0C7Q2 107 aa7.78□□□□□ -1.16
TRIM56-204ENST00000487252 CTRLP40313 264 aa7.78□□□□□ -1.16
TRIM56-204ENST00000487252 AMTP48728 403 aa7.78□□□□□ -1.16
TRIM56-204ENST00000487252 CHCHD1Q96BP2 118 aaKnown RBP7.78□□□□□ -1.16
TRIM56-204ENST00000487252 TMEM208Q9BTX3 173 aa7.78□□□□□ -1.16
TRIM56-204ENST00000487252 PRO1933Q9H354 126 aa7.78□□□□□ -1.16
TRIM56-204ENST00000487252 IGLC6P0CF74 106 aa7.77□□□□□ -1.17
TRIM56-204ENST00000487252 ZNF80P51504 273 aaPredicted RBP7.77□□□□□ -1.17
TRIM56-204ENST00000487252 LINC01559Q495D7 138 aa7.77□□□□□ -1.17
TRIM56-204ENST00000487252 IGFL4Q6B9Z1 124 aa7.77□□□□□ -1.17
TRIM56-204ENST00000487252 C9orf47Q6ZRZ4 202 aa7.77□□□□□ -1.17
TRIM56-204ENST00000487252 C20orf144Q9BQM9 153 aa7.77□□□□□ -1.17
TRIM56-204ENST00000487252 AGPAT4-IT1Q9H0P7 198 aa7.77□□□□□ -1.17
TRIM56-204ENST00000487252 SOCS3O14543 225 aa7.76□□□□□ -1.17
TRIM56-204ENST00000487252 PMCHP20382 165 aa7.76□□□□□ -1.17
TRIM56-204ENST00000487252 LYZL1Q6UWQ5 148 aa7.76□□□□□ -1.17
TRIM56-204ENST00000487252 RNF182Q8N6D2 247 aa7.76□□□□□ -1.17
TRIM56-204ENST00000487252 OR10J6PQ8NGY7 276 aa7.76□□□□□ -1.17
TRIM56-204ENST00000487252 Q8TAT8 98 aa7.76□□□□□ -1.17
TRIM56-204ENST00000487252 BORCS7Q96B45 105 aa7.76□□□□□ -1.17
TRIM56-204ENST00000487252 C14orf144Q96I85 54 aa7.76□□□□□ -1.17
TRIM56-204ENST00000487252 CNFNQ9BYD5 112 aa7.76□□□□□ -1.17
TRIM56-204ENST00000487252 LPAP08519 4548 aa7.75□□□□□ -1.17
TRIM56-204ENST00000487252 TRAV9-2A0A087WT02 112 aa7.75□□□□□ -1.17
TRIM56-204ENST00000487252 A0A0J9YX75 114 aa7.75□□□□□ -1.17
TRIM56-204ENST00000487252 FABP5P3A8MUU1 101 aa7.75□□□□□ -1.17
TRIM56-204ENST00000487252 C3orf79P0CE67 100 aa7.75□□□□□ -1.17
TRIM56-204ENST00000487252 RAB4AP20338 218 aa7.75□□□□□ -1.17
TRIM56-204ENST00000487252 ZNF138P52744 262 aa7.75□□□□□ -1.17
TRIM56-204ENST00000487252 HIST1H1AQ02539 215 aaPredicted RBP7.75□□□□□ -1.17
TRIM56-204ENST00000487252 ERCC8Q13216 396 aa7.75□□□□□ -1.17
TRIM56-204ENST00000487252 VSIG2Q96IQ7 327 aa7.75□□□□□ -1.17
TRIM56-204ENST00000487252 TIMM8BQ9Y5J9 83 aaPredicted RBP7.75□□□□□ -1.17
TRIM56-204ENST00000487252 LENEPQ9Y5L5 61 aa7.75□□□□□ -1.17
TRIM56-204ENST00000487252 F6UB75 175 aa7.74□□□□□ -1.17
TRIM56-204ENST00000487252 HSBP1O75506 76 aa7.74□□□□□ -1.17
TRIM56-204ENST00000487252 FAM104BQ5XKR9 115 aa7.74□□□□□ -1.17
TRIM56-204ENST00000487252 RNASEKQ6P5S7 137 aaKnown RBP7.74□□□□□ -1.17
TRIM56-204ENST00000487252 FAM19A2Q8N3H0 131 aa7.74□□□□□ -1.17
TRIM56-204ENST00000487252 FER1L6-AS1Q8NA97 138 aa7.74□□□□□ -1.17
TRIM56-204ENST00000487252 CHAC1Q9BUX1 264 aa7.74□□□□□ -1.17
TRIM56-204ENST00000487252 M0R2Z0 102 aa7.73□□□□□ -1.17
TRIM56-204ENST00000487252 NTF3P20783 257 aa7.73□□□□□ -1.17
TRIM56-204ENST00000487252 KRTDAPP60985 99 aa7.73□□□□□ -1.17
TRIM56-204ENST00000487252 C16orf74Q96GX8 76 aa7.73□□□□□ -1.17
TRIM56-204ENST00000487252 C20orf173Q96LM9 149 aa7.73□□□□□ -1.17
TRIM56-204ENST00000487252 TMSB15BA0A087X1C1 80 aa7.72□□□□□ -1.17
TRIM56-204ENST00000487252 TRBV7-9A0A0J9YWB2 115 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms