RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 A0A0J9YX75 114 aa11.23□□□□□ -0.61
EPHB4-206ENST00000487222 LOXL1Q08397 574 aaPredicted RBP11.23□□□□□ -0.61
EPHB4-206ENST00000487222 IGHV1-58A0A0C4DH39 117 aa11.23□□□□□ -0.61
EPHB4-206ENST00000487222 FUSP35637 526 aaKnown RBP eCLIP11.23□□□□□ -0.61
EPHB4-206ENST00000487222 ADAMTS9Q9P2N4 1935 aa11.23□□□□□ -0.61
EPHB4-206ENST00000487222 ZNF80P51504 273 aaPredicted RBP11.22□□□□□ -0.61
EPHB4-206ENST00000487222 OBSL1O75147 1896 aa11.22□□□□□ -0.61
EPHB4-206ENST00000487222 UBE2BP63146 152 aa11.22□□□□□ -0.61
EPHB4-206ENST00000487222 PCDH15Q96QU1 1955 aa11.22□□□□□ -0.61
EPHB4-206ENST00000487222 TMEM258P61165 79 aa11.22□□□□□ -0.61
EPHB4-206ENST00000487222 GDF5OSQ5U4N7 250 aa11.22□□□□□ -0.61
EPHB4-206ENST00000487222 DEFB105AQ8NG35 78 aa11.22□□□□□ -0.61
EPHB4-206ENST00000487222 YPEL4Q96NS1 127 aa11.22□□□□□ -0.61
EPHB4-206ENST00000487222 MDFICQ9P1T7 246 aa11.22□□□□□ -0.61
EPHB4-206ENST00000487222 LGALS9O00182 355 aa11.22□□□□□ -0.61
EPHB4-206ENST00000487222 ATOX1O00244 68 aa11.22□□□□□ -0.61
EPHB4-206ENST00000487222 ETDCA0A1B0GVM5 59 aa11.21□□□□□ -0.61
EPHB4-206ENST00000487222 MBD6Q96DN6 1003 aa11.21□□□□□ -0.61
EPHB4-206ENST00000487222 PRO3102Q9H379 93 aa11.21□□□□□ -0.61
EPHB4-206ENST00000487222 Q9HAA7 133 aa11.21□□□□□ -0.61
EPHB4-206ENST00000487222 PRR14LQ5THK1 2151 aa11.21□□□□□ -0.61
EPHB4-206ENST00000487222 NRGNQ92686 78 aa11.21□□□□□ -0.61
EPHB4-206ENST00000487222 SS18L2Q9UHA2 77 aa11.21□□□□□ -0.61
EPHB4-206ENST00000487222 G3V4G9 280 aa11.2□□□□□ -0.62
EPHB4-206ENST00000487222 H3BQ85 93 aa11.2□□□□□ -0.62
EPHB4-206ENST00000487222 IGLC6P0CF74 106 aa11.2□□□□□ -0.62
EPHB4-206ENST00000487222 EIF4EBP1Q13541 118 aaPredicted RBP11.2□□□□□ -0.62
EPHB4-206ENST00000487222 PLA2G5P39877 138 aa11.2□□□□□ -0.62
EPHB4-206ENST00000487222 TRBV12-3P01733 135 aa11.2□□□□□ -0.62
EPHB4-206ENST00000487222 JMJD7-PLA2G4BH0Y9G9 81 aa11.2□□□□□ -0.62
EPHB4-206ENST00000487222 CCDC140Q96MF4 163 aa11.2□□□□□ -0.62
EPHB4-206ENST00000487222 IGHV3-30-3P0DP02 117 aa11.19□□□□□ -0.62
EPHB4-206ENST00000487222 HHLA3Q9XRX5 114 aa11.19□□□□□ -0.62
EPHB4-206ENST00000487222 IGHV4-4A0A075B6R2 117 aa11.19□□□□□ -0.62
EPHB4-206ENST00000487222 FAM236AA0A1B0GUQ0 79 aa11.19□□□□□ -0.62
EPHB4-206ENST00000487222 FAM236BA0A1B0GV22 79 aa11.19□□□□□ -0.62
EPHB4-206ENST00000487222 A6NDX4 124 aa11.19□□□□□ -0.62
EPHB4-206ENST00000487222 ODF3BA8MYP8 253 aa11.19□□□□□ -0.62
EPHB4-206ENST00000487222 CXCL5P42830 114 aa11.19□□□□□ -0.62
EPHB4-206ENST00000487222 NDUFA11Q86Y39 141 aa11.19□□□□□ -0.62
EPHB4-206ENST00000487222 ZMAT4Q9H898 229 aa11.19□□□□□ -0.62
EPHB4-206ENST00000487222 IGKV3D-7A0A0C4DH55 119 aa11.19□□□□□ -0.62
EPHB4-206ENST00000487222 TMEM61Q8N0U2 210 aa11.19□□□□□ -0.62
EPHB4-206ENST00000487222 ZNF106Q9H2Y7 1883 aaKnown RBP11.19□□□□□ -0.62
EPHB4-206ENST00000487222 TRBV10-1A0A0K0K1A3 114 aa11.18□□□□□ -0.62
EPHB4-206ENST00000487222 LECT2O14960 151 aa11.18□□□□□ -0.62
EPHB4-206ENST00000487222 A0A1B0GX51 115 aa11.18□□□□□ -0.62
EPHB4-206ENST00000487222 CLEC2BQ92478 149 aa11.18□□□□□ -0.62
EPHB4-206ENST00000487222 TMEM131Q92545 1883 aa11.17□□□□□ -0.62
EPHB4-206ENST00000487222 C1orf229Q6ZS94 237 aaPredicted RBP11.17□□□□□ -0.62
EPHB4-206ENST00000487222 MRAPQ8TCY5 172 aa11.17□□□□□ -0.62
EPHB4-206ENST00000487222 RPL18AQ02543 176 aaKnown RBP11.17□□□□□ -0.62
EPHB4-206ENST00000487222 MIR7-3HGQ8N6C7 128 aa11.17□□□□□ -0.62
EPHB4-206ENST00000487222 C4orf3Q8WVX3 66 aa11.17□□□□□ -0.62
EPHB4-206ENST00000487222 NDUFA1O15239 70 aa11.17□□□□□ -0.62
EPHB4-206ENST00000487222 IGHV3-30P01768 117 aa11.16□□□□□ -0.62
EPHB4-206ENST00000487222 IGHV3-33P01772 117 aa11.16□□□□□ -0.62
EPHB4-206ENST00000487222 IGHV3-30-5P0DP03 117 aa11.16□□□□□ -0.62
EPHB4-206ENST00000487222 MYCNOSP40205 109 aa11.16□□□□□ -0.62
EPHB4-206ENST00000487222 NCOR2Q9Y618 2525 aa11.16□□□□□ -0.62
EPHB4-206ENST00000487222 TMEM263Q8WUH6 116 aaKnown RBP11.16□□□□□ -0.62
EPHB4-206ENST00000487222 PKIGQ9Y2B9 76 aa11.16□□□□□ -0.62
EPHB4-206ENST00000487222 PTH2Q96A98 100 aa11.15□□□□□ -0.62
EPHB4-206ENST00000487222 ESM1Q9NQ30 184 aa11.15□□□□□ -0.62
EPHB4-206ENST00000487222 CCDC168Q8NDH2 2452 aa11.15□□□□□ -0.62
EPHB4-206ENST00000487222 LMO4P61968 165 aa11.15□□□□□ -0.62
EPHB4-206ENST00000487222 ODF3Q96PU9 254 aa11.15□□□□□ -0.62
EPHB4-206ENST00000487222 PSMB8P28062 276 aa11.14□□□□□ -0.63
EPHB4-206ENST00000487222 MIAQ16674 131 aa11.14□□□□□ -0.63
EPHB4-206ENST00000487222 NAV2Q8IVL1 2488 aa11.14□□□□□ -0.63
EPHB4-206ENST00000487222 MED12LQ86YW9 2145 aa11.14□□□□□ -0.63
EPHB4-206ENST00000487222 TNFRSF13BO14836 293 aaPredicted RBP11.14□□□□□ -0.63
EPHB4-206ENST00000487222 FSTL3O95633 263 aa11.14□□□□□ -0.63
EPHB4-206ENST00000487222 NREPQ16612 68 aa11.14□□□□□ -0.63
EPHB4-206ENST00000487222 SPAG11BQ08648 103 aa11.14□□□□□ -0.63
EPHB4-206ENST00000487222 SMIM20Q8N5G0 67 aa11.14□□□□□ -0.63
EPHB4-206ENST00000487222 CCL18P55774 89 aa11.13□□□□□ -0.63
EPHB4-206ENST00000487222 Q6ZUT4 128 aa11.13□□□□□ -0.63
EPHB4-206ENST00000487222 CRYGBP07316 175 aa11.13□□□□□ -0.63
EPHB4-206ENST00000487222 LINC01548A6NM66 108 aa11.13□□□□□ -0.63
EPHB4-206ENST00000487222 NFE4Q86UQ8 179 aa11.13□□□□□ -0.63
EPHB4-206ENST00000487222 TCL1BO95988 128 aa11.12□□□□□ -0.63
EPHB4-206ENST00000487222 CEMP1Q6PRD7 247 aaPredicted RBP11.12□□□□□ -0.63
EPHB4-206ENST00000487222 CITED2Q99967 270 aaPredicted RBP11.12□□□□□ -0.63
EPHB4-206ENST00000487222 TM2D2Q9BX73 214 aa11.12□□□□□ -0.63
EPHB4-206ENST00000487222 A0A0J9YXY3 114 aa11.12□□□□□ -0.63
EPHB4-206ENST00000487222 IGF1P05019 195 aa11.12□□□□□ -0.63
EPHB4-206ENST00000487222 MAP6D1Q9H9H5 199 aa11.12□□□□□ -0.63
EPHB4-206ENST00000487222 PCNX3Q9H6A9 2034 aa11.12□□□□□ -0.63
EPHB4-206ENST00000487222 NCR3O14931 201 aa11.12□□□□□ -0.63
EPHB4-206ENST00000487222 NEXN-AS1Q8NBZ9 246 aa11.12□□□□□ -0.63
EPHB4-206ENST00000487222 PRO0255Q9UI72 69 aa11.12□□□□□ -0.63
EPHB4-206ENST00000487222 TP53TG3Q9ULZ0 132 aa11.11□□□□□ -0.63
EPHB4-206ENST00000487222 TIRAPP58753 221 aa11.11□□□□□ -0.63
EPHB4-206ENST00000487222 KIAA1549LQ6ZVL6 1849 aa11.11□□□□□ -0.63
EPHB4-206ENST00000487222 TMEM256-PLSCR3K7ERE1 68 aa11.11□□□□□ -0.63
EPHB4-206ENST00000487222 NDUFS5O43920 106 aa11.11□□□□□ -0.63
EPHB4-206ENST00000487222 DIRC1Q969H9 104 aa11.11□□□□□ -0.63
EPHB4-206ENST00000487222 NAV3Q8IVL0 2385 aa11.11□□□□□ -0.63
EPHB4-206ENST00000487222 IGHV4-28A0A0C4DH34 117 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms