RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 LOC389332A0A1B0GUA5 103 aa4.89□□□□□ -1.63
HDAC3-209ENST00000486618 A0A1B0GVY2 172 aa4.89□□□□□ -1.63
HDAC3-209ENST00000486618 IGLL5B9A064 214 aa4.89□□□□□ -1.63
HDAC3-209ENST00000486618 C11orf94C9JXX5 98 aa4.89□□□□□ -1.63
HDAC3-209ENST00000486618 TMEM250H0YL14 139 aa4.89□□□□□ -1.63
HDAC3-209ENST00000486618 SOCS1O15524 211 aa4.89□□□□□ -1.63
HDAC3-209ENST00000486618 RPS10P46783 165 aaKnown RBP4.89□□□□□ -1.63
HDAC3-209ENST00000486618 QRFPP83859 136 aa4.89□□□□□ -1.63
HDAC3-209ENST00000486618 ADIRFQ15847 76 aa4.89□□□□□ -1.63
HDAC3-209ENST00000486618 MRGPRG-AS1Q2M3A8 158 aa4.89□□□□□ -1.63
HDAC3-209ENST00000486618 C1orf100Q5SVJ3 147 aa4.89□□□□□ -1.63
HDAC3-209ENST00000486618 ZNF114Q8NC26 417 aa4.89□□□□□ -1.63
HDAC3-209ENST00000486618 OR10G8Q8NGN5 311 aa4.89□□□□□ -1.63
HDAC3-209ENST00000486618 ARHGAP5-AS1Q96IT6 56 aa4.89□□□□□ -1.63
HDAC3-209ENST00000486618 IMMP2LQ96T52 175 aa4.89□□□□□ -1.63
HDAC3-209ENST00000486618 HDHD3Q9BSH5 251 aaPredicted RBP4.89□□□□□ -1.63
HDAC3-209ENST00000486618 APLNQ9ULZ1 77 aa4.89□□□□□ -1.63
HDAC3-209ENST00000486618 TRBV7-1A0A0A6YYK4 115 aa4.88□□□□□ -1.63
HDAC3-209ENST00000486618 TRAV13-1A0A0B4J241 112 aa4.88□□□□□ -1.63
HDAC3-209ENST00000486618 IGHV1-58A0A0C4DH39 117 aa4.88□□□□□ -1.63
HDAC3-209ENST00000486618 ZNF705FA8MVS1 300 aaPredicted RBP4.88□□□□□ -1.63
HDAC3-209ENST00000486618 TMEM14DPA8MWL7 114 aa4.88□□□□□ -1.63
HDAC3-209ENST00000486618 NDUFC2-KCTD14E9PQ53 114 aa4.88□□□□□ -1.63
HDAC3-209ENST00000486618 CST7O76096 145 aa4.88□□□□□ -1.63
HDAC3-209ENST00000486618 MT-ATP8P03928 68 aa4.88□□□□□ -1.63
HDAC3-209ENST00000486618 ZNF705DP0CH99 300 aaPredicted RBP4.88□□□□□ -1.63
HDAC3-209ENST00000486618 ZNF705BP0CI00 300 aaPredicted RBP4.88□□□□□ -1.63
HDAC3-209ENST00000486618 CRYGAP11844 174 aa4.88□□□□□ -1.63
HDAC3-209ENST00000486618 FABP2P12104 132 aa4.88□□□□□ -1.63
HDAC3-209ENST00000486618 ADCYAP1P18509 176 aa4.88□□□□□ -1.63
HDAC3-209ENST00000486618 GATA2P23769 480 aaPredicted RBP4.88□□□□□ -1.63
HDAC3-209ENST00000486618 RPL27AP46776 148 aaKnown RBP4.88□□□□□ -1.63
HDAC3-209ENST00000486618 PSMB3P49720 205 aa4.88□□□□□ -1.63
HDAC3-209ENST00000486618 CMC4P56277 68 aaPredicted RBP4.88□□□□□ -1.63
HDAC3-209ENST00000486618 ERVK-16P61578 105 aa4.88□□□□□ -1.63
HDAC3-209ENST00000486618 SEC11AP67812 179 aa4.88□□□□□ -1.63
HDAC3-209ENST00000486618 UBE2NLQ5JXB2 153 aa4.88□□□□□ -1.63
HDAC3-209ENST00000486618 TMEM75Q8N9X5 138 aa4.88□□□□□ -1.63
HDAC3-209ENST00000486618 YPEL4Q96NS1 127 aa4.88□□□□□ -1.63
HDAC3-209ENST00000486618 PARLQ9H300 379 aa4.88□□□□□ -1.63
HDAC3-209ENST00000486618 XCL2Q9UBD3 114 aa4.88□□□□□ -1.63
HDAC3-209ENST00000486618 TRAV12-2A0A075B6T6 113 aa4.87□□□□□ -1.63
HDAC3-209ENST00000486618 SMIM26A0A096LP01 95 aa4.87□□□□□ -1.63
HDAC3-209ENST00000486618 IGHV4-28A0A0C4DH34 117 aa4.87□□□□□ -1.63
HDAC3-209ENST00000486618 A0A0J9YXV3 536 aa4.87□□□□□ -1.63
HDAC3-209ENST00000486618 PITX3O75364 302 aa4.87□□□□□ -1.63
HDAC3-209ENST00000486618 SNCGO76070 127 aa4.87□□□□□ -1.63
HDAC3-209ENST00000486618 DUSP14O95147 198 aaKnown RBP4.87□□□□□ -1.63
HDAC3-209ENST00000486618 IGHV3-23P01764 117 aa4.87□□□□□ -1.63
HDAC3-209ENST00000486618 HLA-DQB1P01920 261 aa4.87□□□□□ -1.63
HDAC3-209ENST00000486618 ASIPP42127 132 aa4.87□□□□□ -1.63
HDAC3-209ENST00000486618 CXCL5P42830 114 aa4.87□□□□□ -1.63
HDAC3-209ENST00000486618 ODF3L2Q3SX64 289 aa4.87□□□□□ -1.63
HDAC3-209ENST00000486618 UNQ9165/PRO28630Q6UXU0 137 aa4.87□□□□□ -1.63
HDAC3-209ENST00000486618 ZNF645Q8N7E2 425 aa4.87□□□□□ -1.63
HDAC3-209ENST00000486618 SCGB1C1Q8TD33 95 aa4.87□□□□□ -1.63
HDAC3-209ENST00000486618 RPS10P5Q9NQ39 176 aa4.87□□□□□ -1.63
HDAC3-209ENST00000486618 C21orf62Q9NYP8 219 aa4.87□□□□□ -1.63
HDAC3-209ENST00000486618 S4R3C0 116 aa4.87□□□□□ -1.63
HDAC3-209ENST00000486618 TRBV6-7A0A0A0MS04 114 aa4.86□□□□□ -1.63
HDAC3-209ENST00000486618 IGKV1-6A0A0C4DH72 117 aa4.86□□□□□ -1.63
HDAC3-209ENST00000486618 A0A0G2JRQ6 117 aa4.86□□□□□ -1.63
HDAC3-209ENST00000486618 LINC00473A8K010 186 aa4.86□□□□□ -1.63
HDAC3-209ENST00000486618 ZNF727A8MUV8 499 aa4.86□□□□□ -1.63
HDAC3-209ENST00000486618 M0R2P5 195 aa4.86□□□□□ -1.63
HDAC3-209ENST00000486618 M0R381 172 aa4.86□□□□□ -1.63
HDAC3-209ENST00000486618 SIX6O95475 246 aa4.86□□□□□ -1.63
HDAC3-209ENST00000486618 TRACP01848 142 aa4.86□□□□□ -1.63
HDAC3-209ENST00000486618 SAA1P0DJI8 122 aaPredicted RBP4.86□□□□□ -1.63
HDAC3-209ENST00000486618 LGALS3P17931 250 aaKnown RBP4.86□□□□□ -1.63
HDAC3-209ENST00000486618 GABARAPL2P60520 117 aa4.86□□□□□ -1.63
HDAC3-209ENST00000486618 YPEL3P61236 119 aaPredicted RBP4.86□□□□□ -1.63
HDAC3-209ENST00000486618 INSL4Q14641 139 aa4.86□□□□□ -1.63
HDAC3-209ENST00000486618 KLK9Q2XQG4 91 aa4.86□□□□□ -1.63
HDAC3-209ENST00000486618 SP6Q3SY56 376 aa4.86□□□□□ -1.63
HDAC3-209ENST00000486618 C10orf55Q5SWW7 151 aa4.86□□□□□ -1.63
HDAC3-209ENST00000486618 LINC01545Q5VT33 79 aa4.86□□□□□ -1.63
HDAC3-209ENST00000486618 FAM19A3Q7Z5A8 133 aa4.86□□□□□ -1.63
HDAC3-209ENST00000486618 TOMM6Q96B49 74 aa4.86□□□□□ -1.63
HDAC3-209ENST00000486618 C18orf15Q96N68 181 aa4.86□□□□□ -1.63
HDAC3-209ENST00000486618 ST20Q9HBF5 79 aa4.86□□□□□ -1.63
HDAC3-209ENST00000486618 RABAC1Q9UI14 185 aa4.86□□□□□ -1.63
HDAC3-209ENST00000486618 KLK9Q9UKQ9 250 aa4.86□□□□□ -1.63
HDAC3-209ENST00000486618 TRBV20OR9-2A0A075B6H5 130 aa4.85□□□□□ -1.63
HDAC3-209ENST00000486618 TRAV10A0A0B4J240 114 aa4.85□□□□□ -1.63
HDAC3-209ENST00000486618 TMEM272A0A1B0GTI8 110 aa4.85□□□□□ -1.63
HDAC3-209ENST00000486618 C7orf66A4D0T2 115 aa4.85□□□□□ -1.63
HDAC3-209ENST00000486618 HMSDA8MTL9 139 aa4.85□□□□□ -1.63
HDAC3-209ENST00000486618 KLLNB2CW77 178 aa4.85□□□□□ -1.63
HDAC3-209ENST00000486618 EPM2AB3EWF7 344 aa4.85□□□□□ -1.63
HDAC3-209ENST00000486618 H3BMG7 143 aa4.85□□□□□ -1.63
HDAC3-209ENST00000486618 AGPAT2O15120 278 aa4.85□□□□□ -1.63
HDAC3-209ENST00000486618 NDUFB6O95139 128 aa4.85□□□□□ -1.63
HDAC3-209ENST00000486618 IGLV2-14P01704 120 aa4.85□□□□□ -1.63
HDAC3-209ENST00000486618 IGLC2P0DOY2 106 aa4.85□□□□□ -1.63
HDAC3-209ENST00000486618 IGLC3P0DOY3 106 aa4.85□□□□□ -1.63
HDAC3-209ENST00000486618 HINT1P49773 126 aaPredicted RBP4.85□□□□□ -1.63
HDAC3-209ENST00000486618 C6orf99Q4VX62 202 aa4.85□□□□□ -1.63
HDAC3-209ENST00000486618 C6orf223Q8N319 242 aa4.85□□□□□ -1.63
HDAC3-209ENST00000486618 RNF182Q8N6D2 247 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms