RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 TIMM17AQ99595 171 aa8.71□□□□□ -1.02
PKP4-213ENST00000486254 FN1P02751 2386 aaKnown RBP8.7□□□□□ -1.02
PKP4-213ENST00000486254 IGKCP01834 107 aa8.7□□□□□ -1.02
PKP4-213ENST00000486254 FAM74A4Q5TZK3 123 aa8.7□□□□□ -1.02
PKP4-213ENST00000486254 HIST2H2BDQ6DRA6 164 aa8.7□□□□□ -1.02
PKP4-213ENST00000486254 TMEM141Q96I45 108 aa8.7□□□□□ -1.02
PKP4-213ENST00000486254 SCGB3A1Q96QR1 104 aa8.7□□□□□ -1.02
PKP4-213ENST00000486254 NACAE9PAV3 2078 aa8.69□□□□□ -1.02
PKP4-213ENST00000486254 F8VRH5 84 aa8.69□□□□□ -1.02
PKP4-213ENST00000486254 SIVA1O15304 175 aa8.69□□□□□ -1.02
PKP4-213ENST00000486254 PF4P02776 101 aa8.69□□□□□ -1.02
PKP4-213ENST00000486254 KRTAP10-3P60369 221 aa8.69□□□□□ -1.02
PKP4-213ENST00000486254 C1orf158Q8N1D5 194 aa8.69□□□□□ -1.02
PKP4-213ENST00000486254 NEXN-AS1Q8NBZ9 246 aa8.69□□□□□ -1.02
PKP4-213ENST00000486254 RNASE8Q8TDE3 154 aaKnown RBP8.69□□□□□ -1.02
PKP4-213ENST00000486254 TMEM263Q8WUH6 116 aaKnown RBP8.69□□□□□ -1.02
PKP4-213ENST00000486254 MCRIP2Q9BUT9 160 aaKnown RBP8.69□□□□□ -1.02
PKP4-213ENST00000486254 DKK2Q9UBU2 259 aa8.69□□□□□ -1.02
PKP4-213ENST00000486254 HHLA3Q9XRX5 114 aa8.69□□□□□ -1.02
PKP4-213ENST00000486254 RS1O15537 224 aa8.69□□□□□ -1.02
PKP4-213ENST00000486254 NPSP0C0P6 89 aa8.69□□□□□ -1.02
PKP4-213ENST00000486254 FGF6P10767 208 aa8.69□□□□□ -1.02
PKP4-213ENST00000486254 BOD1L2Q8IYS8 172 aa8.69□□□□□ -1.02
PKP4-213ENST00000486254 DNAJC30Q96LL9 226 aa8.69□□□□□ -1.02
PKP4-213ENST00000486254 IGIPA6NJ69 53 aa8.68□□□□□ -1.02
PKP4-213ENST00000486254 I3L3M4 83 aa8.68□□□□□ -1.02
PKP4-213ENST00000486254 CIDEAO60543 219 aa8.68□□□□□ -1.02
PKP4-213ENST00000486254 IGHV3-53P01767 116 aa8.68□□□□□ -1.02
PKP4-213ENST00000486254 ANKRD39Q53RE8 183 aa8.68□□□□□ -1.02
PKP4-213ENST00000486254 COL5A1-AS1Q5SY13 56 aa8.68□□□□□ -1.02
PKP4-213ENST00000486254 CFAP126Q5VTH2 177 aa8.68□□□□□ -1.02
PKP4-213ENST00000486254 C12orf54Q6X4T0 127 aa8.68□□□□□ -1.02
PKP4-213ENST00000486254 XCL2Q9UBD3 114 aa8.68□□□□□ -1.02
PKP4-213ENST00000486254 DAZ2Q13117 558 aaKnown RBP8.67□□□□□ -1.02
PKP4-213ENST00000486254 PAPPA-AS1Q5QFB9 102 aa8.67□□□□□ -1.02
PKP4-213ENST00000486254 TMEM208Q9BTX3 173 aa8.67□□□□□ -1.02
PKP4-213ENST00000486254 GIG44P09565 113 aaPredicted RBP8.66□□□□□ -1.02
PKP4-213ENST00000486254 CRYBA4P53673 196 aa8.66□□□□□ -1.02
PKP4-213ENST00000486254 BAALCQ8WXS3 180 aa8.66□□□□□ -1.02
PKP4-213ENST00000486254 CITED1Q99966 193 aa8.66□□□□□ -1.02
PKP4-213ENST00000486254 MRPL35Q9NZE8 188 aaKnown RBP8.66□□□□□ -1.02
PKP4-213ENST00000486254 HIVEP1P15822 2718 aa8.65□□□□□ -1.02
PKP4-213ENST00000486254 TSHBP01222 138 aa8.65□□□□□ -1.02
PKP4-213ENST00000486254 C9orf66Q5T8R8 295 aa8.65□□□□□ -1.02
PKP4-213ENST00000486254 C16orf74Q96GX8 76 aa8.65□□□□□ -1.02
PKP4-213ENST00000486254 TP53TG1Q9Y2A0 90 aa8.65□□□□□ -1.02
PKP4-213ENST00000486254 HTN1P15515 57 aa8.65□□□□□ -1.03
PKP4-213ENST00000486254 C2orf91Q6ZV80 131 aa8.65□□□□□ -1.03
PKP4-213ENST00000486254 STPG4Q8N801 248 aa8.65□□□□□ -1.03
PKP4-213ENST00000486254 C20orf203Q8NBC4 194 aa8.65□□□□□ -1.03
PKP4-213ENST00000486254 CSNK1G2-AS1Q8NCQ2 148 aa8.65□□□□□ -1.03
PKP4-213ENST00000486254 CHTOPQ9Y3Y2 248 aaKnown RBP8.65□□□□□ -1.03
PKP4-213ENST00000486254 PYGO1Q9Y3Y4 419 aa8.65□□□□□ -1.03
PKP4-213ENST00000486254 TRBV10-1A0A0K0K1A3 114 aa8.64□□□□□ -1.03
PKP4-213ENST00000486254 WIPF1O43516 503 aa8.64□□□□□ -1.03
PKP4-213ENST00000486254 PMVKQ15126 192 aa8.64□□□□□ -1.03
PKP4-213ENST00000486254 ZC2HC1BQ5TFG8 222 aa8.64□□□□□ -1.03
PKP4-213ENST00000486254 HIGD1BQ9P298 99 aa8.64□□□□□ -1.03
PKP4-213ENST00000486254 TRAV4A0A0B4J268 109 aa8.63□□□□□ -1.03
PKP4-213ENST00000486254 A0A1B0GV90 55 aa8.63□□□□□ -1.03
PKP4-213ENST00000486254 NEGR1Q7Z3B1 354 aa8.63□□□□□ -1.03
PKP4-213ENST00000486254 OVOL2Q9BRP0 275 aa8.63□□□□□ -1.03
PKP4-213ENST00000486254 TNFRSF18Q9Y5U5 241 aa8.63□□□□□ -1.03
PKP4-213ENST00000486254 JMJD1CQ15652 2540 aa8.63□□□□□ -1.03
PKP4-213ENST00000486254 PRSS29PA6NIE9 313 aa8.62□□□□□ -1.03
PKP4-213ENST00000486254 AZU1P20160 251 aa8.62□□□□□ -1.03
PKP4-213ENST00000486254 GTSCR1Q86UQ5 136 aa8.62□□□□□ -1.03
PKP4-213ENST00000486254 MRPL16Q9NX20 251 aaKnown RBP8.62□□□□□ -1.03
PKP4-213ENST00000486254 P0DMU3 169 aa8.61□□□□□ -1.03
PKP4-213ENST00000486254 FAM231AP0DMU4 169 aa8.61□□□□□ -1.03
PKP4-213ENST00000486254 FAM231CP0DMU5 169 aa8.61□□□□□ -1.03
PKP4-213ENST00000486254 BVES-AS1Q5T3Y7 98 aa8.61□□□□□ -1.03
PKP4-213ENST00000486254 PLAC8L1A1L4L8 177 aa8.61□□□□□ -1.03
PKP4-213ENST00000486254 SEC11AP67812 179 aa8.61□□□□□ -1.03
PKP4-213ENST00000486254 HSD52Q0P140 79 aa8.61□□□□□ -1.03
PKP4-213ENST00000486254 TMEM97Q5BJF2 176 aa8.61□□□□□ -1.03
PKP4-213ENST00000486254 CST9LQ9H4G1 147 aa8.61□□□□□ -1.03
PKP4-213ENST00000486254 CUBNO60494 3623 aa8.6□□□□□ -1.03
PKP4-213ENST00000486254 E9PLD3 99 aa8.6□□□□□ -1.03
PKP4-213ENST00000486254 NMUP48645 174 aa8.6□□□□□ -1.03
PKP4-213ENST00000486254 HINT1P49773 126 aaPredicted RBP8.6□□□□□ -1.03
PKP4-213ENST00000486254 RPL39P62891 51 aaKnown RBP8.6□□□□□ -1.03
PKP4-213ENST00000486254 RRN3P1Q2M238 152 aa8.6□□□□□ -1.03
PKP4-213ENST00000486254 MPV17L2Q567V2 206 aa8.6□□□□□ -1.03
PKP4-213ENST00000486254 NFE4Q86UQ8 179 aa8.6□□□□□ -1.03
PKP4-213ENST00000486254 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.6□□□□□ -1.03
PKP4-213ENST00000486254 WFDC9Q8NEX5 89 aa8.6□□□□□ -1.03
PKP4-213ENST00000486254 OR4C5Q8NGB2 326 aa8.6□□□□□ -1.03
PKP4-213ENST00000486254 WFDC10AQ9H1F0 79 aa8.6□□□□□ -1.03
PKP4-213ENST00000486254 SPANXA1Q9NS26 97 aa8.6□□□□□ -1.03
PKP4-213ENST00000486254 F8P00451 2351 aa8.59□□□□□ -1.03
PKP4-213ENST00000486254 IGLV4-69A0A075B6H9 119 aa8.59□□□□□ -1.03
PKP4-213ENST00000486254 IGKV2D-26A0A0A0MRZ7 120 aa8.59□□□□□ -1.03
PKP4-213ENST00000486254 TRGV1A0A0A0MS02 117 aa8.59□□□□□ -1.03
PKP4-213ENST00000486254 SMIM9A6NGZ8 99 aa8.59□□□□□ -1.03
PKP4-213ENST00000486254 PRM2P04554 102 aa8.59□□□□□ -1.03
PKP4-213ENST00000486254 BATFQ16520 125 aa8.59□□□□□ -1.03
PKP4-213ENST00000486254 PCP2Q8IVA1 136 aa8.59□□□□□ -1.03
PKP4-213ENST00000486254 KIR2DL5BQ8NHK3 375 aa8.59□□□□□ -1.03
PKP4-213ENST00000486254 IGHV3OR16-12A0A075B7B8 117 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms