RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 LGALS9BQ3B8N2 356 aa12.06□□□□□ -0.48
CTSA-207ENST00000484855 LGALS9CQ6DKI2 356 aa12.06□□□□□ -0.48
CTSA-207ENST00000484855 C16orf74Q96GX8 76 aa12.06□□□□□ -0.48
CTSA-207ENST00000484855 KIR2DL4Q99706 377 aa12.06□□□□□ -0.48
CTSA-207ENST00000484855 TRGV1A0A0A0MS02 117 aa12.06□□□□□ -0.48
CTSA-207ENST00000484855 RS1O15537 224 aa12.06□□□□□ -0.48
CTSA-207ENST00000484855 TRBV27A0A0K0K1C4 114 aa12.05□□□□□ -0.48
CTSA-207ENST00000484855 TOMM6Q96B49 74 aa12.05□□□□□ -0.48
CTSA-207ENST00000484855 RRN3P1Q2M238 152 aa12.04□□□□□ -0.48
CTSA-207ENST00000484855 PRSS1P07477 247 aa12.03□□□□□ -0.48
CTSA-207ENST00000484855 C2orf66Q6UXQ4 117 aa12.03□□□□□ -0.48
CTSA-207ENST00000484855 hDV102S1A0JD36 115 aa12.03□□□□□ -0.48
CTSA-207ENST00000484855 HSBP1L1C9JCN9 74 aa12.03□□□□□ -0.48
CTSA-207ENST00000484855 P0DMU3 169 aa12.03□□□□□ -0.48
CTSA-207ENST00000484855 FAM231AP0DMU4 169 aa12.03□□□□□ -0.48
CTSA-207ENST00000484855 FAM231CP0DMU5 169 aa12.03□□□□□ -0.48
CTSA-207ENST00000484855 DEFA6Q01524 100 aa12.03□□□□□ -0.48
CTSA-207ENST00000484855 DAZ2Q13117 558 aaKnown RBP12.03□□□□□ -0.48
CTSA-207ENST00000484855 ZFP2Q6ZN57 461 aa12.03□□□□□ -0.48
CTSA-207ENST00000484855 Q6ZTI0 123 aa12.03□□□□□ -0.48
CTSA-207ENST00000484855 DEFB104AQ8WTQ1 72 aa12.03□□□□□ -0.48
CTSA-207ENST00000484855 NOP10Q9NPE3 64 aaKnown RBP12.03□□□□□ -0.48
CTSA-207ENST00000484855 C3orf56Q8N813 242 aa12.02□□□□□ -0.48
CTSA-207ENST00000484855 OR4C5Q8NGB2 326 aa12.02□□□□□ -0.48
CTSA-207ENST00000484855 SCGB3A1Q96QR1 104 aa12.02□□□□□ -0.48
CTSA-207ENST00000484855 MIEN1Q9BRT3 115 aa12.02□□□□□ -0.48
CTSA-207ENST00000484855 PLAC8L1A1L4L8 177 aa12.02□□□□□ -0.49
CTSA-207ENST00000484855 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.02□□□□□ -0.49
CTSA-207ENST00000484855 WIPF1O43516 503 aa12.02□□□□□ -0.49
CTSA-207ENST00000484855 G0S2P27469 103 aa12.02□□□□□ -0.49
CTSA-207ENST00000484855 Q6ZSN1 163 aa12.02□□□□□ -0.49
CTSA-207ENST00000484855 PRIMA1Q86XR5 153 aa12.02□□□□□ -0.49
CTSA-207ENST00000484855 IGHV3-53P01767 116 aa12.01□□□□□ -0.49
CTSA-207ENST00000484855 CYSLTR1Q9Y271 337 aa12.01□□□□□ -0.49
CTSA-207ENST00000484855 I3L3M4 83 aa12.01□□□□□ -0.49
CTSA-207ENST00000484855 IGLC3P0DOY3 106 aa12.01□□□□□ -0.49
CTSA-207ENST00000484855 Q6ZN92 141 aa12.01□□□□□ -0.49
CTSA-207ENST00000484855 DKK2Q9UBU2 259 aa12.01□□□□□ -0.49
CTSA-207ENST00000484855 TNFRSF18Q9Y5U5 241 aa12.01□□□□□ -0.49
CTSA-207ENST00000484855 ODF1Q14990 250 aa12□□□□□ -0.49
CTSA-207ENST00000484855 TP53TG1Q9Y2A0 90 aa12□□□□□ -0.49
CTSA-207ENST00000484855 TRAV4A0A0B4J268 109 aa11.99□□□□□ -0.49
CTSA-207ENST00000484855 RIPPLY3P57055 190 aa11.99□□□□□ -0.49
CTSA-207ENST00000484855 RHOHQ15669 191 aa11.99□□□□□ -0.49
CTSA-207ENST00000484855 SHISA2Q6UWI4 295 aa11.99□□□□□ -0.49
CTSA-207ENST00000484855 UQCR10Q9UDW1 63 aa11.99□□□□□ -0.49
CTSA-207ENST00000484855 FBN1P35555 2871 aaKnown RBP11.99□□□□□ -0.49
CTSA-207ENST00000484855 LINC01549A6NIU2 74 aa11.99□□□□□ -0.49
CTSA-207ENST00000484855 TSHBP01222 138 aa11.99□□□□□ -0.49
CTSA-207ENST00000484855 C12orf54Q6X4T0 127 aa11.99□□□□□ -0.49
CTSA-207ENST00000484855 ZNF479Q96JC4 524 aa11.99□□□□□ -0.49
CTSA-207ENST00000484855 CMYA5Q8N3K9 4069 aa11.98□□□□□ -0.49
CTSA-207ENST00000484855 NEXN-AS1Q8NBZ9 246 aa11.98□□□□□ -0.49
CTSA-207ENST00000484855 C14orf144Q96I85 54 aa11.98□□□□□ -0.49
CTSA-207ENST00000484855 OVOL2Q9BRP0 275 aa11.98□□□□□ -0.49
CTSA-207ENST00000484855 ERASQ7Z444 233 aa11.98□□□□□ -0.49
CTSA-207ENST00000484855 APOC4P55056 127 aa11.97□□□□□ -0.49
CTSA-207ENST00000484855 DNAJC30Q96LL9 226 aa11.97□□□□□ -0.49
CTSA-207ENST00000484855 Q9UF83 564 aa11.97□□□□□ -0.49
CTSA-207ENST00000484855 GAGE12BA1L429 117 aa11.96□□□□□ -0.49
CTSA-207ENST00000484855 GAGE7O76087 117 aa11.96□□□□□ -0.49
CTSA-207ENST00000484855 GAGE12FP0CL80 117 aa11.96□□□□□ -0.49
CTSA-207ENST00000484855 GAGE12GP0CL81 117 aa11.96□□□□□ -0.49
CTSA-207ENST00000484855 GAGE12IP0CL82 117 aa11.96□□□□□ -0.49
CTSA-207ENST00000484855 RPL39P62891 51 aaKnown RBP11.96□□□□□ -0.49
CTSA-207ENST00000484855 KIR2DL5BQ8NHK3 375 aa11.96□□□□□ -0.49
CTSA-207ENST00000484855 TRGV2A0A075B6R0 118 aa11.96□□□□□ -0.5
CTSA-207ENST00000484855 A0A087WX48 190 aa11.96□□□□□ -0.5
CTSA-207ENST00000484855 ZMAT4Q9H898 229 aa11.96□□□□□ -0.5
CTSA-207ENST00000484855 TRAV12-1A0A0B4J245 112 aa11.95□□□□□ -0.5
CTSA-207ENST00000484855 DPM2O94777 84 aa11.95□□□□□ -0.5
CTSA-207ENST00000484855 IGKCP01834 107 aa11.95□□□□□ -0.5
CTSA-207ENST00000484855 EMP1P54849 157 aa11.95□□□□□ -0.5
CTSA-207ENST00000484855 BAALCQ8WXS3 180 aa11.95□□□□□ -0.5
CTSA-207ENST00000484855 MRPL35Q9NZE8 188 aaKnown RBP11.95□□□□□ -0.5
CTSA-207ENST00000484855 X6R8D5 127 aa11.94□□□□□ -0.5
CTSA-207ENST00000484855 SMIM9A6NGZ8 99 aa11.94□□□□□ -0.5
CTSA-207ENST00000484855 IGIPA6NJ69 53 aa11.94□□□□□ -0.5
CTSA-207ENST00000484855 K7EQD1 137 aa11.94□□□□□ -0.5
CTSA-207ENST00000484855 OXLD1Q5BKU9 147 aa11.94□□□□□ -0.5
CTSA-207ENST00000484855 TIMM17AQ99595 171 aa11.94□□□□□ -0.5
CTSA-207ENST00000484855 DEFB135Q30KP9 77 aa11.93□□□□□ -0.5
CTSA-207ENST00000484855 STPG4Q8N801 248 aa11.93□□□□□ -0.5
CTSA-207ENST00000484855 C20orf203Q8NBC4 194 aa11.93□□□□□ -0.5
CTSA-207ENST00000484855 TMEM141Q96I45 108 aa11.93□□□□□ -0.5
CTSA-207ENST00000484855 HNRNPA3P51991 378 aaKnown RBP11.92□□□□□ -0.5
CTSA-207ENST00000484855 ANKRD39Q53RE8 183 aa11.92□□□□□ -0.5
CTSA-207ENST00000484855 F8VRH5 84 aa11.92□□□□□ -0.5
CTSA-207ENST00000484855 IGHV4-30-4P0DP06 118 aa11.92□□□□□ -0.5
CTSA-207ENST00000484855 CHTOPQ9Y3Y2 248 aaKnown RBP11.92□□□□□ -0.5
CTSA-207ENST00000484855 STAB1Q9NY15 2570 aa11.91□□□□□ -0.5
CTSA-207ENST00000484855 TRBV10-1A0A0K0K1A3 114 aa11.91□□□□□ -0.5
CTSA-207ENST00000484855 CIDEAO60543 219 aa11.91□□□□□ -0.5
CTSA-207ENST00000484855 PHLDA1Q8WV24 401 aaPredicted RBP11.91□□□□□ -0.5
CTSA-207ENST00000484855 IGHV3-38A0A0C4DH36 116 aa11.91□□□□□ -0.5
CTSA-207ENST00000484855 PLNP26678 52 aa11.91□□□□□ -0.5
CTSA-207ENST00000484855 SLC25A34Q6PIV7 304 aa11.91□□□□□ -0.5
CTSA-207ENST00000484855 SLC25A29Q8N8R3 303 aa11.91□□□□□ -0.5
CTSA-207ENST00000484855 ZNRF2Q8NHG8 242 aa11.91□□□□□ -0.5
CTSA-207ENST00000484855 TRBV7-3A0A075B6L6 115 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms