RNA–Protein interactions for RNA: ENST00000484562.5

PATJ-207, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 5,448 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-207ENST00000484562 Q6ZUT4 128 aa8.35□□□□□ -1.07
PATJ-207ENST00000484562 IGKV4-1P06312 121 aa8.35□□□□□ -1.07
PATJ-207ENST00000484562 Q8N7P7 452 aa8.35□□□□□ -1.07
PATJ-207ENST00000484562 SIRPDQ9H106 197 aa8.35□□□□□ -1.07
PATJ-207ENST00000484562 LYPD6Q86Y78 171 aa8.34□□□□□ -1.07
PATJ-207ENST00000484562 UPK3BQ9BT76 320 aa8.34□□□□□ -1.07
PATJ-207ENST00000484562 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.34□□□□□ -1.07
PATJ-207ENST00000484562 A6NDX4 124 aa8.34□□□□□ -1.07
PATJ-207ENST00000484562 CASC2Q6XLA1 102 aa8.33□□□□□ -1.08
PATJ-207ENST00000484562 SMIM9A6NGZ8 99 aa8.33□□□□□ -1.08
PATJ-207ENST00000484562 K7ERS5 55 aa8.33□□□□□ -1.08
PATJ-207ENST00000484562 ADORA2A-AS1P86434 159 aa8.33□□□□□ -1.08
PATJ-207ENST00000484562 ODF3L1Q8IXM7 274 aa8.33□□□□□ -1.08
PATJ-207ENST00000484562 KIAA1671Q9BY89 1806 aa8.33□□□□□ -1.08
PATJ-207ENST00000484562 PLXNA2O75051 1894 aa8.33□□□□□ -1.08
PATJ-207ENST00000484562 ZFAND2AQ8N6M9 145 aa8.33□□□□□ -1.08
PATJ-207ENST00000484562 RNASE8Q8TDE3 154 aaKnown RBP8.33□□□□□ -1.08
PATJ-207ENST00000484562 MAP6D1Q9H9H5 199 aa8.33□□□□□ -1.08
PATJ-207ENST00000484562 PLA2G2EQ9NZK7 142 aa8.33□□□□□ -1.08
PATJ-207ENST00000484562 COL4A6Q14031 1691 aa8.32□□□□□ -1.08
PATJ-207ENST00000484562 IGKV2D-26A0A0A0MRZ7 120 aa8.32□□□□□ -1.08
PATJ-207ENST00000484562 WT1P19544 449 aaPredicted RBP8.32□□□□□ -1.08
PATJ-207ENST00000484562 FBXL19-AS1Q494R0 122 aa8.32□□□□□ -1.08
PATJ-207ENST00000484562 A0A0J9YXY3 114 aa8.32□□□□□ -1.08
PATJ-207ENST00000484562 LYRM9A8MSI8 78 aa8.32□□□□□ -1.08
PATJ-207ENST00000484562 ZFP36P26651 326 aaKnown RBP8.32□□□□□ -1.08
PATJ-207ENST00000484562 USP17L23D6RBM5 183 aa8.32□□□□□ -1.08
PATJ-207ENST00000484562 BRK1Q8WUW1 75 aa8.32□□□□□ -1.08
PATJ-207ENST00000484562 WDR81Q562E7 1941 aa8.31□□□□□ -1.08
PATJ-207ENST00000484562 A0A1B0GXF2 115 aa8.31□□□□□ -1.08
PATJ-207ENST00000484562 TCL1BO95988 128 aa8.31□□□□□ -1.08
PATJ-207ENST00000484562 UQCRQO14949 82 aa8.31□□□□□ -1.08
PATJ-207ENST00000484562 TNRC6AQ8NDV7 1962 aaKnown RBP8.31□□□□□ -1.08
PATJ-207ENST00000484562 REG3AQ06141 175 aa8.31□□□□□ -1.08
PATJ-207ENST00000484562 TNFRSF13BO14836 293 aaPredicted RBP8.3□□□□□ -1.08
PATJ-207ENST00000484562 C11orf45Q8TAV5 145 aa8.3□□□□□ -1.08
PATJ-207ENST00000484562 CHD3Q12873 2000 aaKnown RBP8.3□□□□□ -1.08
PATJ-207ENST00000484562 UNQ9165/PRO28630Q6UXU0 137 aa8.3□□□□□ -1.08
PATJ-207ENST00000484562 IGLV2-14P01704 120 aa8.29□□□□□ -1.08
PATJ-207ENST00000484562 TRAV23DV6A0A075B6W5 121 aa8.29□□□□□ -1.08
PATJ-207ENST00000484562 DEFB4AO15263 64 aa8.29□□□□□ -1.08
PATJ-207ENST00000484562 HIGD2AQ9BW72 106 aa8.29□□□□□ -1.08
PATJ-207ENST00000484562 IBA57-AS1B1ANH7 110 aa8.29□□□□□ -1.08
PATJ-207ENST00000484562 LOXL1Q08397 574 aaPredicted RBP8.29□□□□□ -1.08
PATJ-207ENST00000484562 RNF183Q96D59 192 aa8.29□□□□□ -1.08
PATJ-207ENST00000484562 V9GYY9 64 aa8.28□□□□□ -1.08
PATJ-207ENST00000484562 GPR179Q6PRD1 2367 aa8.28□□□□□ -1.08
PATJ-207ENST00000484562 SPANXB1Q9NS25 103 aaPredicted RBP8.28□□□□□ -1.08
PATJ-207ENST00000484562 MYLKQ15746 1914 aa8.28□□□□□ -1.08
PATJ-207ENST00000484562 FAM236DA0A1B0GTK5 79 aa8.28□□□□□ -1.08
PATJ-207ENST00000484562 FAM236CP0DP71 79 aa8.28□□□□□ -1.08
PATJ-207ENST00000484562 E7EUB6 86 aa8.28□□□□□ -1.08
PATJ-207ENST00000484562 IGLC6P0CF74 106 aa8.28□□□□□ -1.08
PATJ-207ENST00000484562 LRRC75A-AS1Q8N1F1 130 aa8.28□□□□□ -1.08
PATJ-207ENST00000484562 LINC00269Q8N2A0 174 aa8.28□□□□□ -1.08
PATJ-207ENST00000484562 PTH2Q96A98 100 aa8.28□□□□□ -1.08
PATJ-207ENST00000484562 C11orf1Q9H5F2 150 aa8.28□□□□□ -1.08
PATJ-207ENST00000484562 PRR15LQ9BU68 103 aa8.28□□□□□ -1.08
PATJ-207ENST00000484562 NCKAP5O14513 1909 aa8.28□□□□□ -1.08
PATJ-207ENST00000484562 NBASA2RRP1 2371 aa8.27□□□□□ -1.09
PATJ-207ENST00000484562 ATP5EP56381 51 aaPredicted RBP8.27□□□□□ -1.09
PATJ-207ENST00000484562 CHCHD10Q8WYQ3 142 aaPredicted RBP8.27□□□□□ -1.09
PATJ-207ENST00000484562 LINC00574Q9H8X3 128 aa8.27□□□□□ -1.09
PATJ-207ENST00000484562 IGKV1D-37A0A075B6S9 117 aa8.27□□□□□ -1.09
PATJ-207ENST00000484562 IGKV2-24A0A0C4DH68 120 aa8.27□□□□□ -1.09
PATJ-207ENST00000484562 GTF3C1Q12789 2109 aa8.27□□□□□ -1.09
PATJ-207ENST00000484562 NDUFV3P56181 108 aaKnown RBP8.27□□□□□ -1.09
PATJ-207ENST00000484562 TRAV26-1A0A087WT03 109 aa8.27□□□□□ -1.09
PATJ-207ENST00000484562 FAM240AA0A1B0GVK7 77 aa8.27□□□□□ -1.09
PATJ-207ENST00000484562 ODF3BA8MYP8 253 aa8.27□□□□□ -1.09
PATJ-207ENST00000484562 NEXN-AS1Q8NBZ9 246 aa8.27□□□□□ -1.09
PATJ-207ENST00000484562 CCDC140Q96MF4 163 aa8.27□□□□□ -1.09
PATJ-207ENST00000484562 TSC2P49815 1807 aa8.27□□□□□ -1.09
PATJ-207ENST00000484562 DNAJC9-AS1A6NH13 148 aa8.26□□□□□ -1.09
PATJ-207ENST00000484562 C20orf197Q8N268 126 aa8.26□□□□□ -1.09
PATJ-207ENST00000484562 P0C879 139 aa8.26□□□□□ -1.09
PATJ-207ENST00000484562 DEFB1P60022 68 aa8.26□□□□□ -1.09
PATJ-207ENST00000484562 CEMP1Q6PRD7 247 aaPredicted RBP8.26□□□□□ -1.09
PATJ-207ENST00000484562 FAM19A1Q7Z5A9 133 aa8.26□□□□□ -1.09
PATJ-207ENST00000484562 SPTSSBQ8NFR3 76 aa8.26□□□□□ -1.09
PATJ-207ENST00000484562 IGF1P05019 195 aa8.26□□□□□ -1.09
PATJ-207ENST00000484562 SPRY4Q9C004 299 aa8.26□□□□□ -1.09
PATJ-207ENST00000484562 HELZP42694 1942 aaKnown RBP8.26□□□□□ -1.09
PATJ-207ENST00000484562 Q6ZTI0 123 aa8.26□□□□□ -1.09
PATJ-207ENST00000484562 MRPL55Q7Z7F7 128 aaKnown RBP8.26□□□□□ -1.09
PATJ-207ENST00000484562 NDUFC2-KCTD14E9PQ53 114 aa8.25□□□□□ -1.09
PATJ-207ENST00000484562 TMEM223A0PJW6 202 aa8.25□□□□□ -1.09
PATJ-207ENST00000484562 HILS1P60008 231 aa8.25□□□□□ -1.09
PATJ-207ENST00000484562 K7EQG2 157 aa8.25□□□□□ -1.09
PATJ-207ENST00000484562 P0DMU3 169 aa8.25□□□□□ -1.09
PATJ-207ENST00000484562 FAM231AP0DMU4 169 aa8.25□□□□□ -1.09
PATJ-207ENST00000484562 FAM231CP0DMU5 169 aa8.25□□□□□ -1.09
PATJ-207ENST00000484562 NDUFC1O43677 76 aa8.25□□□□□ -1.09
PATJ-207ENST00000484562 ZNF80P51504 273 aaPredicted RBP8.25□□□□□ -1.09
PATJ-207ENST00000484562 FSTL3O95633 263 aa8.24□□□□□ -1.09
PATJ-207ENST00000484562 CRYGDP07320 174 aa8.24□□□□□ -1.09
PATJ-207ENST00000484562 C3orf22Q8N5N4 141 aa8.24□□□□□ -1.09
PATJ-207ENST00000484562 TRBV30A0A0K0K1B3 111 aa8.24□□□□□ -1.09
PATJ-207ENST00000484562 FAM222AQ5U5X8 452 aa8.24□□□□□ -1.09
PATJ-207ENST00000484562 IGLV2-8P01709 118 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms