RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 LENEPQ9Y5L5 61 aa3.89□□□□□ -1.79
SEMA3D-204ENST00000484038 URGCP-MRPS24S4R325 110 aa3.89□□□□□ -1.79
SEMA3D-204ENST00000484038 PKHD1L1Q86WI1 4243 aa3.88□□□□□ -1.79
SEMA3D-204ENST00000484038 TRAV21A0A0B4J279 112 aa3.88□□□□□ -1.79
SEMA3D-204ENST00000484038 RAB19A4D1S5 217 aa3.88□□□□□ -1.79
SEMA3D-204ENST00000484038 MGST1P10620 155 aaKnown RBP3.88□□□□□ -1.79
SEMA3D-204ENST00000484038 SULT1A2P50226 295 aa3.88□□□□□ -1.79
SEMA3D-204ENST00000484038 EIF5AP63241 154 aaKnown RBP3.88□□□□□ -1.79
SEMA3D-204ENST00000484038 RPL24P83731 157 aaKnown RBP3.88□□□□□ -1.79
SEMA3D-204ENST00000484038 DPPA3Q6W0C5 159 aa3.88□□□□□ -1.79
SEMA3D-204ENST00000484038 TMEM252Q8N6L7 170 aa3.88□□□□□ -1.79
SEMA3D-204ENST00000484038 HSD17B11Q8NBQ5 300 aa3.88□□□□□ -1.79
SEMA3D-204ENST00000484038 DNAJC30Q96LL9 226 aa3.88□□□□□ -1.79
SEMA3D-204ENST00000484038 C11orf1Q9H5F2 150 aa3.88□□□□□ -1.79
SEMA3D-204ENST00000484038 LYRM2Q9NU23 88 aaPredicted RBP3.88□□□□□ -1.79
SEMA3D-204ENST00000484038 TRAV8-1A0A0A6YYK1 113 aa3.87□□□□□ -1.79
SEMA3D-204ENST00000484038 BORCS7-ASMTA0A0B4J1R7 106 aa3.87□□□□□ -1.79
SEMA3D-204ENST00000484038 A0A1B0GV50 99 aa3.87□□□□□ -1.79
SEMA3D-204ENST00000484038 LOC105371267A0A1B0GV96 52 aa3.87□□□□□ -1.79
SEMA3D-204ENST00000484038 TMEM218A2RU14 115 aa3.87□□□□□ -1.79
SEMA3D-204ENST00000484038 FAM74A7A6NL05 159 aa3.87□□□□□ -1.79
SEMA3D-204ENST00000484038 F8W036 122 aa3.87□□□□□ -1.79
SEMA3D-204ENST00000484038 MT1HL1P0DM35 61 aa3.87□□□□□ -1.79
SEMA3D-204ENST00000484038 ATP6V1FQ16864 119 aa3.87□□□□□ -1.79
SEMA3D-204ENST00000484038 FAM74A3Q4VXF1 159 aa3.87□□□□□ -1.79
SEMA3D-204ENST00000484038 EIF5AL1Q6IS14 154 aaKnown RBP3.87□□□□□ -1.79
SEMA3D-204ENST00000484038 UQCC3Q6UW78 93 aa3.87□□□□□ -1.79
SEMA3D-204ENST00000484038 GOLT1AQ6ZVE7 132 aa3.87□□□□□ -1.79
SEMA3D-204ENST00000484038 CMTM2Q8TAZ6 248 aa3.87□□□□□ -1.79
SEMA3D-204ENST00000484038 KCNS1Q96KK3 526 aa3.87□□□□□ -1.79
SEMA3D-204ENST00000484038 KLK12Q9UKR0 248 aa3.87□□□□□ -1.79
SEMA3D-204ENST00000484038 C9JQL5 133 aa3.86□□□□□ -1.79
SEMA3D-204ENST00000484038 CIDEAO60543 219 aa3.86□□□□□ -1.79
SEMA3D-204ENST00000484038 CFC1BP0CG36 223 aa3.86□□□□□ -1.79
SEMA3D-204ENST00000484038 CFC1P0CG37 223 aa3.86□□□□□ -1.79
SEMA3D-204ENST00000484038 ASIPP42127 132 aa3.86□□□□□ -1.79
SEMA3D-204ENST00000484038 FHITP49789 147 aa3.86□□□□□ -1.79
SEMA3D-204ENST00000484038 KHDC3LQ587J8 217 aa3.86□□□□□ -1.79
SEMA3D-204ENST00000484038 ZNF506Q5JVG8 444 aa3.86□□□□□ -1.79
SEMA3D-204ENST00000484038 STPG4Q8N801 248 aa3.86□□□□□ -1.79
SEMA3D-204ENST00000484038 CYB561D1Q8N8Q1 229 aa3.86□□□□□ -1.79
SEMA3D-204ENST00000484038 FAM213BQ8TBF2 198 aa3.86□□□□□ -1.79
SEMA3D-204ENST00000484038 UBE2WQ96B02 151 aa3.86□□□□□ -1.79
SEMA3D-204ENST00000484038 NKX6-2Q9C056 277 aaPredicted RBP3.86□□□□□ -1.79
SEMA3D-204ENST00000484038 KCNIP2Q9NS61 270 aa3.86□□□□□ -1.79
SEMA3D-204ENST00000484038 A0A087WWC5 75 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 A0A087WX48 190 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 PGPA6NDG6 321 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 PGPEP1LA6NFU8 196 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 EIF3GO75821 320 aaKnown RBP eCLIP3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 SEC11BP0C7V7 166 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 ATP6V0CP27449 155 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 KRTAP10-7P60409 375 aaPredicted RBP3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 C14orf177Q52M58 125 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 TMEM75Q8N9X5 138 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 OR5C1Q8NGR4 320 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 TVP23CQ96ET8 276 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 SGK494Q96LW2 274 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 C17orf112F2Z3M2 114 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 SCGB1D1O95968 90 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 HLA-DQA1P01909 254 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 LINC00694P0DN24 101 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 CAMPP49913 170 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 TAS2R45P59539 299 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 GNG5P63218 68 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 UBE2V1Q13404 147 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 FFAR4Q5NUL3 377 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 C10orf91Q5T1B1 145 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 KCNIP4Q6PIL6 250 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 NIT1Q86X76 327 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 CBLN2Q8IUK8 224 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 OR2G3Q8NGZ4 309 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 C9orf85Q96MD7 179 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 NDFIP1Q9BT67 221 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 SAMD10Q9BYL1 202 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 WDR61Q9GZS3 305 aaKnown RBP3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 PARLQ9H300 379 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 OTORQ9NRC9 128 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 Q9UF83 564 aa3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 CARHSP1Q9Y2V2 147 aaKnown RBP3.85□□□□□ -1.79
SEMA3D-204ENST00000484038 GCGP01275 180 aa3.84□□□□□ -1.8
SEMA3D-204ENST00000484038 AKR1C3P42330 323 aa3.84□□□□□ -1.8
SEMA3D-204ENST00000484038 ZNF80P51504 273 aaPredicted RBP3.84□□□□□ -1.8
SEMA3D-204ENST00000484038 FGF8P55075 233 aaPredicted RBP3.84□□□□□ -1.8
SEMA3D-204ENST00000484038 CCL20P78556 96 aa3.84□□□□□ -1.8
SEMA3D-204ENST00000484038 ELOBQ15370 118 aa3.84□□□□□ -1.8
SEMA3D-204ENST00000484038 Q6ZRU5 148 aa3.84□□□□□ -1.8
SEMA3D-204ENST00000484038 Q75L30 129 aa3.84□□□□□ -1.8
SEMA3D-204ENST00000484038 SVBPQ8N300 66 aa3.84□□□□□ -1.8
SEMA3D-204ENST00000484038 C14orf178Q8N769 122 aaPredicted RBP3.84□□□□□ -1.8
SEMA3D-204ENST00000484038 LYPD6BQ8NI32 183 aa3.84□□□□□ -1.8
SEMA3D-204ENST00000484038 SEC11CQ9BY50 192 aa3.84□□□□□ -1.8
SEMA3D-204ENST00000484038 EIF5A2Q9GZV4 153 aaKnown RBP3.84□□□□□ -1.8
SEMA3D-204ENST00000484038 DPH3P1Q9H4G8 78 aa3.84□□□□□ -1.8
SEMA3D-204ENST00000484038 LRP2P98164 4655 aa3.84□□□□□ -1.8
SEMA3D-204ENST00000484038 A8MWV9 139 aa3.83□□□□□ -1.8
SEMA3D-204ENST00000484038 SMIM1B2RUZ4 78 aa3.83□□□□□ -1.8
SEMA3D-204ENST00000484038 CRPP02741 224 aa3.83□□□□□ -1.8
SEMA3D-204ENST00000484038 RNASE3P12724 160 aaKnown RBP3.83□□□□□ -1.8
SEMA3D-204ENST00000484038 S100A4P26447 101 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms