RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 PTH2Q96A98 100 aa8.7□□□□□ -1.02
COL21A1-209ENST00000482933 C9orf85Q96MD7 179 aa8.7□□□□□ -1.02
COL21A1-209ENST00000482933 PRADC1Q9BSG0 188 aa8.7□□□□□ -1.02
COL21A1-209ENST00000482933 C11orf21Q9P2W6 132 aa8.7□□□□□ -1.02
COL21A1-209ENST00000482933 TRBV6-4A0A1B0GX49 114 aa8.69□□□□□ -1.02
COL21A1-209ENST00000482933 DNAH10OSP0CZ25 163 aa8.69□□□□□ -1.02
COL21A1-209ENST00000482933 TIRAPP58753 221 aa8.69□□□□□ -1.02
COL21A1-209ENST00000482933 RHOHQ15669 191 aa8.69□□□□□ -1.02
COL21A1-209ENST00000482933 CFAP126Q5VTH2 177 aa8.69□□□□□ -1.02
COL21A1-209ENST00000482933 WDR73Q6P4I2 378 aa8.69□□□□□ -1.02
COL21A1-209ENST00000482933 FAM231DQ6ZW35 169 aa8.69□□□□□ -1.02
COL21A1-209ENST00000482933 BAGE2Q86Y30 109 aa8.69□□□□□ -1.02
COL21A1-209ENST00000482933 IL36BQ9NZH7 164 aa8.69□□□□□ -1.02
COL21A1-209ENST00000482933 PCLOQ9Y6V0 5065 aa8.68□□□□□ -1.02
COL21A1-209ENST00000482933 TGIF2-C20orf24A0A0A6YYL0 155 aa8.68□□□□□ -1.02
COL21A1-209ENST00000482933 LOC100131303A0A0U1RQF7 123 aa8.68□□□□□ -1.02
COL21A1-209ENST00000482933 FABP5P3A8MUU1 101 aa8.68□□□□□ -1.02
COL21A1-209ENST00000482933 MT-ND6P03923 174 aa8.68□□□□□ -1.02
COL21A1-209ENST00000482933 S100A4P26447 101 aaKnown RBP8.68□□□□□ -1.02
COL21A1-209ENST00000482933 SLC25A29Q8N8R3 303 aa8.68□□□□□ -1.02
COL21A1-209ENST00000482933 DAZAP1Q96EP5 407 aaKnown RBP8.68□□□□□ -1.02
COL21A1-209ENST00000482933 LINC00479Q96M42 142 aa8.68□□□□□ -1.02
COL21A1-209ENST00000482933 MSRB1Q9NZV6 116 aa8.68□□□□□ -1.02
COL21A1-209ENST00000482933 TNFRSF18Q9Y5U5 241 aa8.68□□□□□ -1.02
COL21A1-209ENST00000482933 TRAV34A0A0B4J273 112 aa8.67□□□□□ -1.02
COL21A1-209ENST00000482933 PGPEP1LA6NFU8 196 aa8.67□□□□□ -1.02
COL21A1-209ENST00000482933 C5orf52A6NGY3 159 aa8.67□□□□□ -1.02
COL21A1-209ENST00000482933 IGLV2-8P01709 118 aa8.67□□□□□ -1.02
COL21A1-209ENST00000482933 CRYGDP07320 174 aa8.67□□□□□ -1.02
COL21A1-209ENST00000482933 MGST1P10620 155 aaKnown RBP8.67□□□□□ -1.02
COL21A1-209ENST00000482933 RNASE3P12724 160 aaKnown RBP8.67□□□□□ -1.02
COL21A1-209ENST00000482933 RASL11AQ6T310 242 aa8.67□□□□□ -1.02
COL21A1-209ENST00000482933 MAPKAPK5-AS1Q8N8E1 139 aa8.67□□□□□ -1.02
COL21A1-209ENST00000482933 ZFP30Q9Y2G7 519 aa8.67□□□□□ -1.02
COL21A1-209ENST00000482933 TRAV8-6A0A0B4J262 113 aa8.66□□□□□ -1.02
COL21A1-209ENST00000482933 IGHV3-38A0A0C4DH36 116 aa8.66□□□□□ -1.02
COL21A1-209ENST00000482933 K7EN84 100 aa8.66□□□□□ -1.02
COL21A1-209ENST00000482933 CXCL1P09341 107 aa8.66□□□□□ -1.02
COL21A1-209ENST00000482933 S100A2P29034 98 aa8.66□□□□□ -1.02
COL21A1-209ENST00000482933 PIK3CD-AS1Q5SR53 167 aa8.66□□□□□ -1.02
COL21A1-209ENST00000482933 ZFP82Q8N141 532 aa8.66□□□□□ -1.02
COL21A1-209ENST00000482933 IGHV3-73A0A0B4J1V6 119 aa8.65□□□□□ -1.02
COL21A1-209ENST00000482933 IGKV3D-20A0A0C4DH25 116 aa8.65□□□□□ -1.02
COL21A1-209ENST00000482933 A8MWV9 139 aa8.65□□□□□ -1.02
COL21A1-209ENST00000482933 LTAP01374 205 aa8.65□□□□□ -1.02
COL21A1-209ENST00000482933 TRGC2P03986 189 aa8.65□□□□□ -1.02
COL21A1-209ENST00000482933 ASIPP42127 132 aa8.65□□□□□ -1.02
COL21A1-209ENST00000482933 AKR1D1P51857 326 aa8.65□□□□□ -1.02
COL21A1-209ENST00000482933 SNRPEP62304 92 aaKnown RBP8.65□□□□□ -1.02
COL21A1-209ENST00000482933 CT83Q5H943 113 aa8.65□□□□□ -1.02
COL21A1-209ENST00000482933 ZFP2Q6ZN57 461 aa8.65□□□□□ -1.02
COL21A1-209ENST00000482933 Q86TA4 180 aa8.65□□□□□ -1.02
COL21A1-209ENST00000482933 MLST8Q9BVC4 326 aa8.65□□□□□ -1.02
COL21A1-209ENST00000482933 FAM231BA6NCW3 169 aa8.64□□□□□ -1.03
COL21A1-209ENST00000482933 GATCO43716 136 aaKnown RBP8.64□□□□□ -1.03
COL21A1-209ENST00000482933 FABP9Q0Z7S8 132 aa8.64□□□□□ -1.03
COL21A1-209ENST00000482933 LINC01556Q5JQF7 62 aa8.64□□□□□ -1.03
COL21A1-209ENST00000482933 OR10J3Q5JRS4 329 aa8.64□□□□□ -1.03
COL21A1-209ENST00000482933 TRAPPC1Q9Y5R8 145 aa8.64□□□□□ -1.03
COL21A1-209ENST00000482933 A0A087WTM6 91 aa8.63□□□□□ -1.03
COL21A1-209ENST00000482933 A8MWL6 223 aa8.63□□□□□ -1.03
COL21A1-209ENST00000482933 LELP1Q5T871 98 aa8.63□□□□□ -1.03
COL21A1-209ENST00000482933 COX8CQ7Z4L0 72 aa8.63□□□□□ -1.03
COL21A1-209ENST00000482933 Q8N1X5 172 aa8.63□□□□□ -1.03
COL21A1-209ENST00000482933 ATP6V0E2Q8NHE4 81 aa8.63□□□□□ -1.03
COL21A1-209ENST00000482933 GNB1LQ9BYB4 327 aa8.63□□□□□ -1.03
COL21A1-209ENST00000482933 GTSF1LQ9H1H1 148 aa8.63□□□□□ -1.03
COL21A1-209ENST00000482933 V9GYV3 84 aa8.63□□□□□ -1.03
COL21A1-209ENST00000482933 XKRY2A2RUG3 117 aa8.63□□□□□ -1.03
COL21A1-209ENST00000482933 NDUFA6P56556 154 aa8.63□□□□□ -1.03
COL21A1-209ENST00000482933 DNLZQ5SXM8 178 aa8.63□□□□□ -1.03
COL21A1-209ENST00000482933 ATP5L2Q7Z4Y8 100 aa8.63□□□□□ -1.03
COL21A1-209ENST00000482933 GFRA4Q9GZZ7 299 aa8.63□□□□□ -1.03
COL21A1-209ENST00000482933 NAT8BQ9UHF3 227 aa8.63□□□□□ -1.03
COL21A1-209ENST00000482933 ABCA13Q86UQ4 5058 aa8.62□□□□□ -1.03
COL21A1-209ENST00000482933 IBA57-AS1B1ANH7 110 aa8.62□□□□□ -1.03
COL21A1-209ENST00000482933 H3BVH4 76 aa8.62□□□□□ -1.03
COL21A1-209ENST00000482933 PSCAO43653 123 aa8.62□□□□□ -1.03
COL21A1-209ENST00000482933 HIST1H2BKO60814 126 aa8.62□□□□□ -1.03
COL21A1-209ENST00000482933 P01737 135 aa8.62□□□□□ -1.03
COL21A1-209ENST00000482933 HIST1H2BJP06899 126 aa8.62□□□□□ -1.03
COL21A1-209ENST00000482933 TRGC1P0CF51 173 aa8.62□□□□□ -1.03
COL21A1-209ENST00000482933 SMIM6P0DI80 62 aa8.62□□□□□ -1.03
COL21A1-209ENST00000482933 HIST1H2BOP23527 126 aa8.62□□□□□ -1.03
COL21A1-209ENST00000482933 HIST1H2BBP33778 126 aa8.62□□□□□ -1.03
COL21A1-209ENST00000482933 HIST1H2BDP58876 126 aa8.62□□□□□ -1.03
COL21A1-209ENST00000482933 HIST1H2BCP62807 126 aa8.62□□□□□ -1.03
COL21A1-209ENST00000482933 HIST2H2BEQ16778 126 aa8.62□□□□□ -1.03
COL21A1-209ENST00000482933 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.62□□□□□ -1.03
COL21A1-209ENST00000482933 FAM162BQ5T6X4 162 aa8.62□□□□□ -1.03
COL21A1-209ENST00000482933 HIST1H2BHQ93079 126 aa8.62□□□□□ -1.03
COL21A1-209ENST00000482933 ZC2HC1AQ96GY0 325 aa8.62□□□□□ -1.03
COL21A1-209ENST00000482933 HIST1H2BNQ99877 126 aa8.62□□□□□ -1.03
COL21A1-209ENST00000482933 HIST1H2BMQ99879 126 aa8.62□□□□□ -1.03
COL21A1-209ENST00000482933 SMIM27A0A1W2PRY6 76 aa8.61□□□□□ -1.03
COL21A1-209ENST00000482933 RHODO00212 210 aa8.61□□□□□ -1.03
COL21A1-209ENST00000482933 SH2D1AO60880 128 aa8.61□□□□□ -1.03
COL21A1-209ENST00000482933 HLA-DQA1P01909 254 aa8.61□□□□□ -1.03
COL21A1-209ENST00000482933 CRIP1P50238 77 aa8.61□□□□□ -1.03
COL21A1-209ENST00000482933 NUDT10Q8NFP7 164 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms