RNA–Protein interactions for RNA: ENST00000482843.5

RAPGEF3-210, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,395 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-210ENST00000482843 IGHV7-4-1A0A0J9YVY3 117 aa9.09□□□□□ -0.95
RAPGEF3-210ENST00000482843 H3BRM9 83 aa9.09□□□□□ -0.95
RAPGEF3-210ENST00000482843 A0A087WWL8 130 aa9.09□□□□□ -0.95
RAPGEF3-210ENST00000482843 LINC00336Q6ZUF6 198 aa9.09□□□□□ -0.95
RAPGEF3-210ENST00000482843 TMEM190Q8WZ59 177 aa9.09□□□□□ -0.95
RAPGEF3-210ENST00000482843 SPANXA1Q9NS26 97 aa9.09□□□□□ -0.95
RAPGEF3-210ENST00000482843 FLNAP21333 2647 aaKnown RBP9.09□□□□□ -0.95
RAPGEF3-210ENST00000482843 OVOL1O14753 267 aa9.09□□□□□ -0.95
RAPGEF3-210ENST00000482843 HOXA3O43365 443 aaPredicted RBP9.09□□□□□ -0.95
RAPGEF3-210ENST00000482843 RNF185Q96GF1 192 aa9.09□□□□□ -0.95
RAPGEF3-210ENST00000482843 FASNP49327 2511 aaKnown RBP9.08□□□□□ -0.96
RAPGEF3-210ENST00000482843 RBAKDNA6NC62 111 aa9.08□□□□□ -0.96
RAPGEF3-210ENST00000482843 SEC11AP67812 179 aa9.08□□□□□ -0.96
RAPGEF3-210ENST00000482843 GTSCR1Q86UQ5 136 aa9.08□□□□□ -0.96
RAPGEF3-210ENST00000482843 JPT2Q9H910 190 aa9.08□□□□□ -0.96
RAPGEF3-210ENST00000482843 NXT2Q9NPJ8 142 aaKnown RBP9.08□□□□□ -0.96
RAPGEF3-210ENST00000482843 MXRA5Q9NR99 2828 aa9.08□□□□□ -0.96
RAPGEF3-210ENST00000482843 A0A096LNJ9 63 aa9.07□□□□□ -0.96
RAPGEF3-210ENST00000482843 H3BMG7 143 aa9.07□□□□□ -0.96
RAPGEF3-210ENST00000482843 LINC01545Q5VT33 79 aa9.07□□□□□ -0.96
RAPGEF3-210ENST00000482843 C9orf47Q6ZRZ4 202 aa9.07□□□□□ -0.96
RAPGEF3-210ENST00000482843 NF1P21359 2839 aa9.07□□□□□ -0.96
RAPGEF3-210ENST00000482843 H3BS24 57 aa9.07□□□□□ -0.96
RAPGEF3-210ENST00000482843 SLC25A16P16260 332 aa9.07□□□□□ -0.96
RAPGEF3-210ENST00000482843 RPL39LQ96EH5 51 aaKnown RBP9.07□□□□□ -0.96
RAPGEF3-210ENST00000482843 KLK9Q9UKQ9 250 aa9.07□□□□□ -0.96
RAPGEF3-210ENST00000482843 FN1P02751 2386 aaKnown RBP9.07□□□□□ -0.96
RAPGEF3-210ENST00000482843 SPINK13Q1W4C9 94 aa9.07□□□□□ -0.96
RAPGEF3-210ENST00000482843 PCP2Q8IVA1 136 aa9.07□□□□□ -0.96
RAPGEF3-210ENST00000482843 CHD6Q8TD26 2715 aa9.06□□□□□ -0.96
RAPGEF3-210ENST00000482843 TRPT1Q86TN4 253 aaKnown RBP9.06□□□□□ -0.96
RAPGEF3-210ENST00000482843 WFDC11Q8NEX6 87 aa9.06□□□□□ -0.96
RAPGEF3-210ENST00000482843 SNRPD3P62318 126 aaKnown RBP9.06□□□□□ -0.96
RAPGEF3-210ENST00000482843 CRXO43186 299 aaPredicted RBP9.06□□□□□ -0.96
RAPGEF3-210ENST00000482843 AMTNQ6UX39 209 aa9.06□□□□□ -0.96
RAPGEF3-210ENST00000482843 GPHB5Q86YW7 130 aa9.06□□□□□ -0.96
RAPGEF3-210ENST00000482843 HECTD1Q9ULT8 2610 aa9.05□□□□□ -0.96
RAPGEF3-210ENST00000482843 F8W1H4 67 aa9.05□□□□□ -0.96
RAPGEF3-210ENST00000482843 DSCR9P59020 149 aa9.05□□□□□ -0.96
RAPGEF3-210ENST00000482843 ZC2HC1BQ5TFG8 222 aa9.05□□□□□ -0.96
RAPGEF3-210ENST00000482843 ZFAND2AQ8N6M9 145 aa9.05□□□□□ -0.96
RAPGEF3-210ENST00000482843 GATD1Q8NB37 220 aa9.05□□□□□ -0.96
RAPGEF3-210ENST00000482843 U3KQE9 123 aa9.05□□□□□ -0.96
RAPGEF3-210ENST00000482843 ITPR3Q14573 2671 aa9.05□□□□□ -0.96
RAPGEF3-210ENST00000482843 FBN2P35556 2912 aa9.05□□□□□ -0.96
RAPGEF3-210ENST00000482843 GCSHP23434 173 aa9.05□□□□□ -0.96
RAPGEF3-210ENST00000482843 LAGE3Q14657 143 aa9.05□□□□□ -0.96
RAPGEF3-210ENST00000482843 FOXI1Q12951 378 aa9.04□□□□□ -0.96
RAPGEF3-210ENST00000482843 GAGE13Q4V321 117 aa9.04□□□□□ -0.96
RAPGEF3-210ENST00000482843 DGAT2L7PQ6IED9 249 aa9.04□□□□□ -0.96
RAPGEF3-210ENST00000482843 CHCHD5Q9BSY4 110 aa9.04□□□□□ -0.96
RAPGEF3-210ENST00000482843 SCRT2Q9NQ03 307 aa9.04□□□□□ -0.96
RAPGEF3-210ENST00000482843 ZNF256Q9Y2P7 627 aaPredicted RBP9.04□□□□□ -0.96
RAPGEF3-210ENST00000482843 SCGB3A1Q96QR1 104 aa9.04□□□□□ -0.96
RAPGEF3-210ENST00000482843 ZNF56Q15929 161 aa9.04□□□□□ -0.96
RAPGEF3-210ENST00000482843 LINC01587Q99440 93 aa9.04□□□□□ -0.96
RAPGEF3-210ENST00000482843 IGHV3-73A0A0B4J1V6 119 aa9.03□□□□□ -0.96
RAPGEF3-210ENST00000482843 U3KQK5 164 aa9.03□□□□□ -0.96
RAPGEF3-210ENST00000482843 HELZ2Q9BYK8 2649 aaKnown RBP9.03□□□□□ -0.96
RAPGEF3-210ENST00000482843 IGHV4OR15-8A0A075B7B6 117 aa9.03□□□□□ -0.96
RAPGEF3-210ENST00000482843 A0A087WW49 117 aa9.03□□□□□ -0.96
RAPGEF3-210ENST00000482843 K7EMI3 77 aa9.03□□□□□ -0.96
RAPGEF3-210ENST00000482843 COX8AP10176 69 aa9.03□□□□□ -0.96
RAPGEF3-210ENST00000482843 FHL3Q13643 280 aa9.03□□□□□ -0.96
RAPGEF3-210ENST00000482843 MRPL35Q9NZE8 188 aaKnown RBP9.03□□□□□ -0.96
RAPGEF3-210ENST00000482843 IGHV3OR16-12A0A075B7B8 117 aa9.03□□□□□ -0.96
RAPGEF3-210ENST00000482843 TRAV4A0A0B4J268 109 aa9.03□□□□□ -0.96
RAPGEF3-210ENST00000482843 HOXD3P31249 432 aaPredicted RBP9.03□□□□□ -0.96
RAPGEF3-210ENST00000482843 LINC01620Q4KN68 170 aa9.03□□□□□ -0.96
RAPGEF3-210ENST00000482843 C18orf65Q6ZTR6 163 aa9.03□□□□□ -0.96
RAPGEF3-210ENST00000482843 Q8N8P6 123 aa9.03□□□□□ -0.96
RAPGEF3-210ENST00000482843 DPH3P1Q9H4G8 78 aa9.03□□□□□ -0.96
RAPGEF3-210ENST00000482843 TMEM262E9PQX1 116 aa9.02□□□□□ -0.97
RAPGEF3-210ENST00000482843 SLURP1P55000 103 aa9.02□□□□□ -0.97
RAPGEF3-210ENST00000482843 ZNF843Q8N446 348 aa9.02□□□□□ -0.97
RAPGEF3-210ENST00000482843 ZMAT4Q9H898 229 aa9.02□□□□□ -0.97
RAPGEF3-210ENST00000482843 NDUFA7O95182 113 aa9.02□□□□□ -0.97
RAPGEF3-210ENST00000482843 IGKCP01834 107 aa9.02□□□□□ -0.97
RAPGEF3-210ENST00000482843 SUMO2P61956 95 aaKnown RBP9.02□□□□□ -0.97
RAPGEF3-210ENST00000482843 LGALS9BQ3B8N2 356 aa9.02□□□□□ -0.97
RAPGEF3-210ENST00000482843 LGALS9CQ6DKI2 356 aa9.02□□□□□ -0.97
RAPGEF3-210ENST00000482843 ZNF575Q86XF7 245 aa9.02□□□□□ -0.97
RAPGEF3-210ENST00000482843 KNCNA6PVL3 124 aa9.01□□□□□ -0.97
RAPGEF3-210ENST00000482843 H3BUA1 57 aa9.01□□□□□ -0.97
RAPGEF3-210ENST00000482843 IGLV1-40P01703 118 aa9.01□□□□□ -0.97
RAPGEF3-210ENST00000482843 BRK1Q8WUW1 75 aa9.01□□□□□ -0.97
RAPGEF3-210ENST00000482843 C19orf54Q5BKX5 351 aa9.01□□□□□ -0.97
RAPGEF3-210ENST00000482843 COX8CQ7Z4L0 72 aa9.01□□□□□ -0.97
RAPGEF3-210ENST00000482843 DYNLRB2Q8TF09 96 aa9.01□□□□□ -0.97
RAPGEF3-210ENST00000482843 DPM2O94777 84 aa9.01□□□□□ -0.97
RAPGEF3-210ENST00000482843 ZNRF2Q8NHG8 242 aa9.01□□□□□ -0.97
RAPGEF3-210ENST00000482843 RASL10AQ92737 203 aa9.01□□□□□ -0.97
RAPGEF3-210ENST00000482843 PRM2P04554 102 aa9□□□□□ -0.97
RAPGEF3-210ENST00000482843 PSMB8P28062 276 aa9□□□□□ -0.97
RAPGEF3-210ENST00000482843 DEFB131AP59861 70 aa9□□□□□ -0.97
RAPGEF3-210ENST00000482843 SMIM2Q9BVW6 85 aa9□□□□□ -0.97
RAPGEF3-210ENST00000482843 OXTP01178 125 aa8.99□□□□□ -0.97
RAPGEF3-210ENST00000482843 MDFICQ9P1T7 246 aa8.99□□□□□ -0.97
RAPGEF3-210ENST00000482843 IGKV2D-26A0A0A0MRZ7 120 aa8.99□□□□□ -0.97
RAPGEF3-210ENST00000482843 IGHV4-31P0DP07 118 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms