RNA–Protein interactions for RNA: ENST00000482785.1

SHQ1-208, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 3

Gene SHQ1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-208ENST00000482785 COLCA2A8K830 154 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 PPP5D1E7EU14 171 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 UBE2L6O14933 153 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 PLA2G10O15496 165 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 ORC5O43913 435 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 CD2P06729 351 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 SRP19P09132 144 aaKnown RBP2.09□□□□□ -2.07
SHQ1-208ENST00000482785 ZNF705DP0CH99 300 aaPredicted RBP2.09□□□□□ -2.07
SHQ1-208ENST00000482785 ZNF93P35789 620 aaPredicted RBP2.09□□□□□ -2.07
SHQ1-208ENST00000482785 RPL27AP46776 148 aaKnown RBP2.09□□□□□ -2.07
SHQ1-208ENST00000482785 RBM11P57052 281 aaKnown RBP2.09□□□□□ -2.07
SHQ1-208ENST00000482785 RBX1P62877 108 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 PPP3R1P63098 170 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 DHRS2Q13268 280 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 PIGYQ3MUY2 71 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 LGALSLQ3ZCW2 172 aaPredicted RBP2.09□□□□□ -2.07
SHQ1-208ENST00000482785 XAF1Q6GPH4 301 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 GOLT1AQ6ZVE7 132 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 TRAPPC6BQ86SZ2 158 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 LINC00311Q8N616 119 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 GINS3Q9BRX5 216 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 WDR61Q9GZS3 305 aaKnown RBP2.09□□□□□ -2.07
SHQ1-208ENST00000482785 SMDT1Q9H4I9 107 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 TAS2R4Q9NYW5 299 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 CKLFQ9UBR5 152 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 UFC1Q9Y3C8 167 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 IGKV2-28A0A075B6P5 120 aa2.08□□□□□ -2.08
SHQ1-208ENST00000482785 MCRIP1C9JLW8 97 aa2.08□□□□□ -2.08
SHQ1-208ENST00000482785 GEMIN2O14893 280 aaKnown RBP2.08□□□□□ -2.08
SHQ1-208ENST00000482785 IGKV2D-28P01615 120 aa2.08□□□□□ -2.08
SHQ1-208ENST00000482785 UBBP0CG47 229 aa2.08□□□□□ -2.08
SHQ1-208ENST00000482785 NFYBP25208 207 aa2.08□□□□□ -2.08
SHQ1-208ENST00000482785 ZNF137PP52743 207 aa2.08□□□□□ -2.08
SHQ1-208ENST00000482785 TAS2R20P59543 309 aa2.08□□□□□ -2.08
SHQ1-208ENST00000482785 INSL4Q14641 139 aa2.08□□□□□ -2.08
SHQ1-208ENST00000482785 SMIM20Q8N5G0 67 aa2.08□□□□□ -2.08
SHQ1-208ENST00000482785 Q8N6K4 173 aa2.08□□□□□ -2.08
SHQ1-208ENST00000482785 ZNF709Q8N972 641 aa2.08□□□□□ -2.08
SHQ1-208ENST00000482785 ACOT12Q8WYK0 555 aa2.08□□□□□ -2.08
SHQ1-208ENST00000482785 GPR146Q96CH1 333 aa2.08□□□□□ -2.08
SHQ1-208ENST00000482785 GPER1Q99527 375 aa2.08□□□□□ -2.08
SHQ1-208ENST00000482785 S100A13Q99584 98 aa2.08□□□□□ -2.08
SHQ1-208ENST00000482785 LSM2Q9Y333 95 aaKnown RBP2.08□□□□□ -2.08
SHQ1-208ENST00000482785 TRAV1-2A0A0B4J238 106 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 A0A1B0GU33 70 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 TRDV1A0A1B0GX56 115 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 C2orf70A6NJV1 201 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 AIPO00170 330 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 SDCBPO00560 298 aaPredicted RBP2.07□□□□□ -2.08
SHQ1-208ENST00000482785 PDCD5O14737 125 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 SLC22A1O15245 554 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 YPEL1O60688 119 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 UCHL1P09936 223 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 BLVRBP30043 206 aaPredicted RBP2.07□□□□□ -2.08
SHQ1-208ENST00000482785 TPPP2P59282 170 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 DEFA1P59665 94 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 QRFPP83859 136 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 DIAPH2-AS1Q14236 149 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 NEDD8Q15843 81 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 MORN2Q502X0 79 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 HSD17B12Q53GQ0 312 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 AKR1C8PQ5T2L2 129 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 GLIPR1L1Q6UWM5 242 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 TMEM136Q6ZRR5 245 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 C12orf45Q8N5I9 185 aaPredicted RBP2.07□□□□□ -2.08
SHQ1-208ENST00000482785 TCTEX1D1Q8N7M0 179 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 ZNF439Q8NDP4 499 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 OR10K1Q8NGX5 313 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 OR2T10Q8NGZ9 312 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 LEAP2Q969E1 77 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 ARL11Q969Q4 196 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 TMEM203Q969S6 136 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 YPEL2Q96QA6 119 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 CST11Q9H112 138 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 MIXL1Q9H2W2 232 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 XAGE1AQ9HD64 81 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 LYRM2Q9NU23 88 aaPredicted RBP2.07□□□□□ -2.08
SHQ1-208ENST00000482785 NDUFB11Q9NX14 153 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 JPT1Q9UK76 154 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 PRNDQ9UKY0 176 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 TRAPPC2LQ9UL33 140 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 SSR3Q9UNL2 185 aa2.07□□□□□ -2.08
SHQ1-208ENST00000482785 IGHV3-73A0A0B4J1V6 119 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 PNMA8CA0A1B0GUJ8 204 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 TMEM14DPA8MWL7 114 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 GGTLC3B5MD39 225 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 HMGB3O15347 200 aaKnown RBP2.06□□□□□ -2.08
SHQ1-208ENST00000482785 NAPSAO96009 420 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 IGHV3-7P01780 117 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 SPART-AS1P0CW21 52 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 S100A7P31151 101 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 LPAR6P43657 344 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 CSN1S1P47710 185 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 SERPINB10P48595 397 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 TAS2R30P59541 319 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 RPL30P62888 115 aaKnown RBP2.06□□□□□ -2.08
SHQ1-208ENST00000482785 HMGN3Q15651 99 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 LTC4SQ16873 150 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 DNLZQ5SXM8 178 aa2.06□□□□□ -2.08
SHQ1-208ENST00000482785 LCE3CQ5T5A8 94 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms