RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 F6UB75 175 aa10.74□□□□□ -0.69
COL9A2-207ENST00000482722 ARL3P36405 182 aa10.74□□□□□ -0.69
COL9A2-207ENST00000482722 AMELXQ99217 191 aa10.74□□□□□ -0.69
COL9A2-207ENST00000482722 TRBV12-3P01733 135 aa10.74□□□□□ -0.69
COL9A2-207ENST00000482722 IGHV3-11P01762 117 aa10.74□□□□□ -0.69
COL9A2-207ENST00000482722 RPL39P62891 51 aaKnown RBP10.74□□□□□ -0.69
COL9A2-207ENST00000482722 LY6EQ16553 131 aa10.74□□□□□ -0.69
COL9A2-207ENST00000482722 TTC32Q5I0X7 151 aa10.74□□□□□ -0.69
COL9A2-207ENST00000482722 SHISA2Q6UWI4 295 aa10.74□□□□□ -0.69
COL9A2-207ENST00000482722 GPHB5Q86YW7 130 aa10.74□□□□□ -0.69
COL9A2-207ENST00000482722 Q8N1Y9 231 aa10.74□□□□□ -0.69
COL9A2-207ENST00000482722 IGHV3-33P01772 117 aa10.73□□□□□ -0.69
COL9A2-207ENST00000482722 ELANEP08246 267 aa10.73□□□□□ -0.69
COL9A2-207ENST00000482722 PMVKQ15126 192 aa10.73□□□□□ -0.69
COL9A2-207ENST00000482722 CFAP161Q6P656 301 aa10.73□□□□□ -0.69
COL9A2-207ENST00000482722 IGIPA6NJ69 53 aa10.73□□□□□ -0.69
COL9A2-207ENST00000482722 IFITM1P13164 125 aa10.73□□□□□ -0.69
COL9A2-207ENST00000482722 C5orf56Q8N8D9 126 aa10.73□□□□□ -0.69
COL9A2-207ENST00000482722 ZNRF2Q8NHG8 242 aa10.73□□□□□ -0.69
COL9A2-207ENST00000482722 IGHV4-30-2A0A087WSY4 118 aa10.72□□□□□ -0.69
COL9A2-207ENST00000482722 TRAV41A0A0B4J266 112 aa10.72□□□□□ -0.69
COL9A2-207ENST00000482722 RNASE4P34096 147 aaKnown RBP10.72□□□□□ -0.69
COL9A2-207ENST00000482722 ATP5J2P56134 94 aa10.72□□□□□ -0.69
COL9A2-207ENST00000482722 PAPPA-AS1Q5QFB9 102 aa10.72□□□□□ -0.69
COL9A2-207ENST00000482722 UNQ9165/PRO28630Q6UXU0 137 aa10.72□□□□□ -0.69
COL9A2-207ENST00000482722 MRPL53Q96EL3 112 aaKnown RBP10.72□□□□□ -0.69
COL9A2-207ENST00000482722 CCL19Q99731 98 aa10.72□□□□□ -0.69
COL9A2-207ENST00000482722 MTORP42345 2549 aa10.72□□□□□ -0.69
COL9A2-207ENST00000482722 TRBV7-1A0A0A6YYK4 115 aa10.72□□□□□ -0.69
COL9A2-207ENST00000482722 HERV-K104P63124 156 aa10.72□□□□□ -0.69
COL9A2-207ENST00000482722 SMIM20Q8N5G0 67 aa10.72□□□□□ -0.69
COL9A2-207ENST00000482722 J3QQQ9 107 aa10.71□□□□□ -0.69
COL9A2-207ENST00000482722 M0QXV9 152 aa10.71□□□□□ -0.69
COL9A2-207ENST00000482722 TMEM263Q8WUH6 116 aaKnown RBP10.71□□□□□ -0.69
COL9A2-207ENST00000482722 ZFAND2AQ8N6M9 145 aa10.71□□□□□ -0.69
COL9A2-207ENST00000482722 ODF3Q96PU9 254 aa10.71□□□□□ -0.69
COL9A2-207ENST00000482722 JPT2Q9H910 190 aa10.71□□□□□ -0.69
COL9A2-207ENST00000482722 TEX49A0A1B0GTD5 131 aa10.71□□□□□ -0.7
COL9A2-207ENST00000482722 LGALS3P17931 250 aaKnown RBP10.71□□□□□ -0.7
COL9A2-207ENST00000482722 MUC4Q99102 2169 aa10.71□□□□□ -0.7
COL9A2-207ENST00000482722 TRAV2A0A0B4J234 112 aa10.7□□□□□ -0.7
COL9A2-207ENST00000482722 IGHV1-69DA0A0B4J2H0 117 aa10.7□□□□□ -0.7
COL9A2-207ENST00000482722 RPL32P62910 135 aaKnown RBP10.7□□□□□ -0.7
COL9A2-207ENST00000482722 FAM159AQ6UWV7 190 aa10.7□□□□□ -0.7
COL9A2-207ENST00000482722 IGHV4-38-2P0DP08 117 aa10.69□□□□□ -0.7
COL9A2-207ENST00000482722 LINC01620Q4KN68 170 aa10.69□□□□□ -0.7
COL9A2-207ENST00000482722 C15orf53Q8NAA6 179 aa10.69□□□□□ -0.7
COL9A2-207ENST00000482722 FAM110AQ9BQ89 295 aa10.69□□□□□ -0.7
COL9A2-207ENST00000482722 TRAV8-4A0A0B4J246 113 aa10.69□□□□□ -0.7
COL9A2-207ENST00000482722 TRAV21A0A0B4J279 112 aa10.69□□□□□ -0.7
COL9A2-207ENST00000482722 Q1RN00 199 aa10.69□□□□□ -0.7
COL9A2-207ENST00000482722 BEX4Q9NWD9 120 aaPredicted RBP10.69□□□□□ -0.7
COL9A2-207ENST00000482722 A0A087WWL8 130 aa10.68□□□□□ -0.7
COL9A2-207ENST00000482722 P0DMU3 169 aa10.68□□□□□ -0.7
COL9A2-207ENST00000482722 FAM231AP0DMU4 169 aa10.68□□□□□ -0.7
COL9A2-207ENST00000482722 FAM231CP0DMU5 169 aa10.68□□□□□ -0.7
COL9A2-207ENST00000482722 MUSTN1Q8IVN3 82 aa10.68□□□□□ -0.7
COL9A2-207ENST00000482722 MOB4Q9Y3A3 225 aa10.68□□□□□ -0.7
COL9A2-207ENST00000482722 FLNAP21333 2647 aaKnown RBP10.68□□□□□ -0.7
COL9A2-207ENST00000482722 ZNF876PQ49A33 203 aa10.68□□□□□ -0.7
COL9A2-207ENST00000482722 Q6Q795 121 aa10.68□□□□□ -0.7
COL9A2-207ENST00000482722 OR10J6PQ8NGY7 276 aa10.68□□□□□ -0.7
COL9A2-207ENST00000482722 ITPR3Q14573 2671 aa10.67□□□□□ -0.7
COL9A2-207ENST00000482722 PPP1R17O96001 155 aa10.67□□□□□ -0.7
COL9A2-207ENST00000482722 ATXN8Q156A1 80 aa10.67□□□□□ -0.7
COL9A2-207ENST00000482722 IGHV3-64A0A075B6Q5 118 aa10.67□□□□□ -0.7
COL9A2-207ENST00000482722 F5H697 171 aa10.67□□□□□ -0.7
COL9A2-207ENST00000482722 PF4V1P10720 104 aa10.67□□□□□ -0.7
COL9A2-207ENST00000482722 RNASE3P12724 160 aaKnown RBP10.67□□□□□ -0.7
COL9A2-207ENST00000482722 KRTAP10-9P60411 292 aa10.67□□□□□ -0.7
COL9A2-207ENST00000482722 TMEM141Q96I45 108 aa10.67□□□□□ -0.7
COL9A2-207ENST00000482722 A0A0B4J2C4 111 aa10.67□□□□□ -0.7
COL9A2-207ENST00000482722 AVPP01185 164 aa10.67□□□□□ -0.7
COL9A2-207ENST00000482722 LINC00315P59091 139 aa10.67□□□□□ -0.7
COL9A2-207ENST00000482722 LENEPQ9Y5L5 61 aa10.67□□□□□ -0.7
COL9A2-207ENST00000482722 U3KQE9 123 aa10.67□□□□□ -0.7
COL9A2-207ENST00000482722 FASNP49327 2511 aaKnown RBP10.66□□□□□ -0.7
COL9A2-207ENST00000482722 POLR2KP53803 58 aaKnown RBP10.66□□□□□ -0.7
COL9A2-207ENST00000482722 TIMM17AQ99595 171 aa10.66□□□□□ -0.7
COL9A2-207ENST00000482722 OPRPNQ99935 248 aaPredicted RBP10.66□□□□□ -0.7
COL9A2-207ENST00000482722 WNK1Q9H4A3 2382 aa10.66□□□□□ -0.7
COL9A2-207ENST00000482722 EDN2P20800 178 aa10.66□□□□□ -0.7
COL9A2-207ENST00000482722 HIST2H2BCQ6DN03 193 aa10.66□□□□□ -0.7
COL9A2-207ENST00000482722 KIF25-AS1Q9Y6Z4 181 aa10.66□□□□□ -0.7
COL9A2-207ENST00000482722 RPL13AP40429 203 aaKnown RBP10.65□□□□□ -0.7
COL9A2-207ENST00000482722 C9orf139Q6ZV77 190 aa10.65□□□□□ -0.7
COL9A2-207ENST00000482722 LINC00477Q96M19 166 aa10.65□□□□□ -0.7
COL9A2-207ENST00000482722 HECTD1Q9ULT8 2610 aa10.65□□□□□ -0.7
COL9A2-207ENST00000482722 NIPBLQ6KC79 2804 aaeCLIP10.65□□□□□ -0.7
COL9A2-207ENST00000482722 FAM74A4Q5TZK3 123 aa10.65□□□□□ -0.7
COL9A2-207ENST00000482722 SUMO4Q6EEV6 95 aa10.65□□□□□ -0.7
COL9A2-207ENST00000482722 H3BUX3 64 aa10.64□□□□□ -0.71
COL9A2-207ENST00000482722 BLCAPP62952 87 aa10.64□□□□□ -0.71
COL9A2-207ENST00000482722 POM121L12Q8N7R1 296 aa10.64□□□□□ -0.71
COL9A2-207ENST00000482722 NOTCH3Q9UM47 2321 aa10.64□□□□□ -0.71
COL9A2-207ENST00000482722 IGHV4OR15-8A0A075B7B6 117 aa10.64□□□□□ -0.71
COL9A2-207ENST00000482722 A0A087WW49 117 aa10.64□□□□□ -0.71
COL9A2-207ENST00000482722 TRBV10-2A0A0K0K1G8 114 aa10.64□□□□□ -0.71
COL9A2-207ENST00000482722 H3BMM0 161 aa10.64□□□□□ -0.71
COL9A2-207ENST00000482722 TRIAP1O43715 76 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms