RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 M0R233 179 aa1.75□□□□□ -2.13
SF3B1-210ENST00000482158 IGKCP01834 107 aa1.75□□□□□ -2.13
SF3B1-210ENST00000482158 CRPP02741 224 aa1.75□□□□□ -2.13
SF3B1-210ENST00000482158 PIPP12273 146 aaPredicted RBP1.75□□□□□ -2.13
SF3B1-210ENST00000482158 ADCYAP1P18509 176 aa1.75□□□□□ -2.13
SF3B1-210ENST00000482158 Q6ZSA8 131 aa1.75□□□□□ -2.13
SF3B1-210ENST00000482158 SLC25A26Q70HW3 274 aa1.75□□□□□ -2.13
SF3B1-210ENST00000482158 MYOZ3Q8TDC0 251 aa1.75□□□□□ -2.13
SF3B1-210ENST00000482158 S100A16Q96FQ6 103 aaKnown RBP1.75□□□□□ -2.13
SF3B1-210ENST00000482158 PREX2Q70Z35 1606 aa1.75□□□□□ -2.13
SF3B1-210ENST00000482158 ABCA9Q8IUA7 1624 aa1.75□□□□□ -2.13
SF3B1-210ENST00000482158 DLG5Q8TDM6 1919 aa1.75□□□□□ -2.13
SF3B1-210ENST00000482158 SDK1Q7Z5N4 2213 aa1.74□□□□□ -2.13
SF3B1-210ENST00000482158 MADDQ8WXG6 1647 aa1.74□□□□□ -2.13
SF3B1-210ENST00000482158 LOC107984156A0A0G2JMH3 177 aa1.74□□□□□ -2.13
SF3B1-210ENST00000482158 CCKP06307 115 aa1.74□□□□□ -2.13
SF3B1-210ENST00000482158 MGST1P10620 155 aaKnown RBP1.74□□□□□ -2.13
SF3B1-210ENST00000482158 RBM3P98179 157 aaKnown RBP1.74□□□□□ -2.13
SF3B1-210ENST00000482158 RHOHQ15669 191 aa1.74□□□□□ -2.13
SF3B1-210ENST00000482158 S100A7L2Q5SY68 101 aa1.74□□□□□ -2.13
SF3B1-210ENST00000482158 SPANXN1Q5VSR9 72 aa1.74□□□□□ -2.13
SF3B1-210ENST00000482158 COMMD6Q7Z4G1 85 aa1.74□□□□□ -2.13
SF3B1-210ENST00000482158 ARL17AQ8IVW1 177 aa1.74□□□□□ -2.13
SF3B1-210ENST00000482158 DYNLRB2Q8TF09 96 aa1.74□□□□□ -2.13
SF3B1-210ENST00000482158 S100ZQ8WXG8 99 aa1.74□□□□□ -2.13
SF3B1-210ENST00000482158 MUCL1Q96DR8 90 aa1.74□□□□□ -2.13
SF3B1-210ENST00000482158 AMELYQ99218 206 aa1.74□□□□□ -2.13
SF3B1-210ENST00000482158 SMIM7Q9BQ49 75 aa1.74□□□□□ -2.13
SF3B1-210ENST00000482158 ST20Q9HBF5 79 aa1.74□□□□□ -2.13
SF3B1-210ENST00000482158 C14orf132Q9NPU4 83 aa1.74□□□□□ -2.13
SF3B1-210ENST00000482158 NDUFA12Q9UI09 145 aa1.74□□□□□ -2.13
SF3B1-210ENST00000482158 GOLGA3Q08378 1498 aa1.74□□□□□ -2.13
SF3B1-210ENST00000482158 RGPD1P0DJD0 1748 aa1.74□□□□□ -2.13
SF3B1-210ENST00000482158 PCDH15Q96QU1 1955 aa1.74□□□□□ -2.13
SF3B1-210ENST00000482158 RTTNQ86VV8 2226 aa1.74□□□□□ -2.13
SF3B1-210ENST00000482158 KIF1AQ12756 1690 aa1.74□□□□□ -2.13
SF3B1-210ENST00000482158 PLIN4Q96Q06 1357 aa1.73□□□□□ -2.13
SF3B1-210ENST00000482158 LAMA4Q16363 1823 aa1.73□□□□□ -2.13
SF3B1-210ENST00000482158 CUX1P39880 1505 aa1.73□□□□□ -2.13
SF3B1-210ENST00000482158 ABCC2Q92887 1545 aa1.73□□□□□ -2.13
SF3B1-210ENST00000482158 ATOX1O00244 68 aa1.73□□□□□ -2.13
SF3B1-210ENST00000482158 POLR2JP52435 117 aaKnown RBP1.73□□□□□ -2.13
SF3B1-210ENST00000482158 ZNF345Q14585 488 aa1.73□□□□□ -2.13
SF3B1-210ENST00000482158 Q1T7F1 81 aa1.73□□□□□ -2.13
SF3B1-210ENST00000482158 ZNF826PQ6ZT77 177 aa1.73□□□□□ -2.13
SF3B1-210ENST00000482158 ARPINQ7Z6K5 226 aa1.73□□□□□ -2.13
SF3B1-210ENST00000482158 FAM213BQ8TBF2 198 aa1.73□□□□□ -2.13
SF3B1-210ENST00000482158 RABAC1Q9UI14 185 aa1.73□□□□□ -2.13
SF3B1-210ENST00000482158 SPCS1Q9Y6A9 102 aa1.73□□□□□ -2.13
SF3B1-210ENST00000482158 NCOA2Q15596 1464 aa1.73□□□□□ -2.13
SF3B1-210ENST00000482158 HFM1A2PYH4 1435 aa1.73□□□□□ -2.13
SF3B1-210ENST00000482158 DOCK11Q5JSL3 2073 aa1.73□□□□□ -2.13
SF3B1-210ENST00000482158 MYOFQ9NZM1 2061 aa1.73□□□□□ -2.13
SF3B1-210ENST00000482158 SETBP1Q9Y6X0 1596 aa1.72□□□□□ -2.13
SF3B1-210ENST00000482158 CDK13Q14004 1512 aaKnown RBP1.72□□□□□ -2.13
SF3B1-210ENST00000482158 LMTK2Q8IWU2 1503 aa1.72□□□□□ -2.13
SF3B1-210ENST00000482158 CUL9Q8IWT3 2517 aa1.72□□□□□ -2.13
SF3B1-210ENST00000482158 COL4A6Q14031 1691 aa1.72□□□□□ -2.13
SF3B1-210ENST00000482158 A0A087WSZ3 146 aa1.72□□□□□ -2.13
SF3B1-210ENST00000482158 HMSDA8MTL9 139 aa1.72□□□□□ -2.13
SF3B1-210ENST00000482158 H3BRM9 83 aa1.72□□□□□ -2.13
SF3B1-210ENST00000482158 CFDP00746 253 aaPredicted RBP1.72□□□□□ -2.13
SF3B1-210ENST00000482158 IGLC2P0DOY2 106 aa1.72□□□□□ -2.13
SF3B1-210ENST00000482158 IGLC3P0DOY3 106 aa1.72□□□□□ -2.13
SF3B1-210ENST00000482158 FAUP35544 74 aaKnown RBP1.72□□□□□ -2.13
SF3B1-210ENST00000482158 DSCR4P56555 118 aaPredicted RBP1.72□□□□□ -2.13
SF3B1-210ENST00000482158 SEC11AP67812 179 aa1.72□□□□□ -2.13
SF3B1-210ENST00000482158 CCL8P80075 99 aa1.72□□□□□ -2.13
SF3B1-210ENST00000482158 ADIRFQ15847 76 aa1.72□□□□□ -2.13
SF3B1-210ENST00000482158 CASC2Q6XLA1 102 aa1.72□□□□□ -2.13
SF3B1-210ENST00000482158 ZCCHC23Q6ZST2 131 aa1.72□□□□□ -2.13
SF3B1-210ENST00000482158 PPDPFLQ8WWR9 84 aa1.72□□□□□ -2.13
SF3B1-210ENST00000482158 TMEM141Q96I45 108 aa1.72□□□□□ -2.13
SF3B1-210ENST00000482158 LINC00474Q9P2X8 69 aa1.72□□□□□ -2.13
SF3B1-210ENST00000482158 TOP2BQ02880 1626 aa1.72□□□□□ -2.13
SF3B1-210ENST00000482158 RAPGEF6Q8TEU7 1601 aa1.72□□□□□ -2.13
SF3B1-210ENST00000482158 ANKARQ7Z5J8 1434 aa1.72□□□□□ -2.13
SF3B1-210ENST00000482158 MED13Q9UHV7 2174 aa1.72□□□□□ -2.13
SF3B1-210ENST00000482158 ZGRF1Q86YA3 2104 aa1.72□□□□□ -2.13
SF3B1-210ENST00000482158 HMGXB3Q12766 1538 aa1.71□□□□□ -2.14
SF3B1-210ENST00000482158 MLH3Q9UHC1 1453 aa1.71□□□□□ -2.14
SF3B1-210ENST00000482158 E7EUB6 86 aa1.71□□□□□ -2.14
SF3B1-210ENST00000482158 BAALC-AS2P0C853 105 aa1.71□□□□□ -2.14
SF3B1-210ENST00000482158 UBE2G1P62253 170 aa1.71□□□□□ -2.14
SF3B1-210ENST00000482158 ETDBQ3ZM63 59 aa1.71□□□□□ -2.14
SF3B1-210ENST00000482158 SPANXN5Q5MJ07 72 aa1.71□□□□□ -2.14
SF3B1-210ENST00000482158 BVES-AS1Q5T3Y7 98 aa1.71□□□□□ -2.14
SF3B1-210ENST00000482158 SLC48A1Q6P1K1 146 aa1.71□□□□□ -2.14
SF3B1-210ENST00000482158 DEFB119Q8N690 84 aa1.71□□□□□ -2.14
SF3B1-210ENST00000482158 OR10AG1Q8NH19 301 aa1.71□□□□□ -2.14
SF3B1-210ENST00000482158 CYSTM1Q9H1C7 97 aa1.71□□□□□ -2.14
SF3B1-210ENST00000482158 HEATR1Q9H583 2144 aaKnown RBP1.71□□□□□ -2.14
SF3B1-210ENST00000482158 MRPL35Q9NZE8 188 aaKnown RBP1.71□□□□□ -2.14
SF3B1-210ENST00000482158 CACFD1Q9UGQ2 172 aa1.71□□□□□ -2.14
SF3B1-210ENST00000482158 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.71□□□□□ -2.14
SF3B1-210ENST00000482158 ZNF142P52746 1687 aaPredicted RBP1.71□□□□□ -2.14
SF3B1-210ENST00000482158 FREM3P0C091 2139 aa1.7□□□□□ -2.14
SF3B1-210ENST00000482158 ATP10BO94823 1461 aa1.7□□□□□ -2.14
SF3B1-210ENST00000482158 CDK12Q9NYV4 1490 aaPredicted RBP1.7□□□□□ -2.14
SF3B1-210ENST00000482158 CEP192Q8TEP8 1941 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms