RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 TMSB15BA0A087X1C1 80 aa9.22□□□□□ -0.93
HDAC6-224ENST00000481929 A0A096LNI7 61 aa9.22□□□□□ -0.93
HDAC6-224ENST00000481929 SH2D1AO60880 128 aa9.22□□□□□ -0.93
HDAC6-224ENST00000481929 LCE2AQ5TA79 106 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-224ENST00000481929 CFAP161Q6P656 301 aa9.22□□□□□ -0.93
HDAC6-224ENST00000481929 C15orf56Q8N910 161 aa9.22□□□□□ -0.93
HDAC6-224ENST00000481929 C20orf203Q8NBC4 194 aa9.22□□□□□ -0.93
HDAC6-224ENST00000481929 TRAV26-2A0A0B4J265 109 aa9.21□□□□□ -0.94
HDAC6-224ENST00000481929 IGHV1-24A0A0C4DH33 117 aa9.21□□□□□ -0.94
HDAC6-224ENST00000481929 CRIP1P50238 77 aa9.21□□□□□ -0.94
HDAC6-224ENST00000481929 IQCJQ1A5X6 159 aa9.21□□□□□ -0.94
HDAC6-224ENST00000481929 Q86TA4 180 aa9.21□□□□□ -0.94
HDAC6-224ENST00000481929 ZNF664Q8N3J9 261 aa9.21□□□□□ -0.94
HDAC6-224ENST00000481929 LINC00474Q9P2X8 69 aa9.21□□□□□ -0.94
HDAC6-224ENST00000481929 PSORS1C2Q9UIG4 136 aa9.21□□□□□ -0.94
HDAC6-224ENST00000481929 CYCSP99999 105 aaKnown RBP9.2□□□□□ -0.94
HDAC6-224ENST00000481929 HIGD2BQ4VC39 106 aa9.2□□□□□ -0.94
HDAC6-224ENST00000481929 FAM162BQ5T6X4 162 aa9.2□□□□□ -0.94
HDAC6-224ENST00000481929 RAB24Q969Q5 203 aa9.2□□□□□ -0.94
HDAC6-224ENST00000481929 TMEM167BQ9NRX6 74 aa9.2□□□□□ -0.94
HDAC6-224ENST00000481929 F5H697 171 aa9.19□□□□□ -0.94
HDAC6-224ENST00000481929 LINC01559Q495D7 138 aa9.19□□□□□ -0.94
HDAC6-224ENST00000481929 GFRA4Q9GZZ7 299 aa9.19□□□□□ -0.94
HDAC6-224ENST00000481929 IGLV4-60A0A075B6I1 120 aa9.18□□□□□ -0.94
HDAC6-224ENST00000481929 A0A1B0GUV1 79 aa9.18□□□□□ -0.94
HDAC6-224ENST00000481929 RPL12P30050 165 aaKnown RBP9.18□□□□□ -0.94
HDAC6-224ENST00000481929 SULT1A2P50226 295 aa9.18□□□□□ -0.94
HDAC6-224ENST00000481929 CACNG7P62955 275 aa9.18□□□□□ -0.94
HDAC6-224ENST00000481929 AQP10Q96PS8 301 aa9.18□□□□□ -0.94
HDAC6-224ENST00000481929 PKIGQ9Y2B9 76 aa9.18□□□□□ -0.94
HDAC6-224ENST00000481929 A0A1W2PRE2 83 aa9.17□□□□□ -0.94
HDAC6-224ENST00000481929 GAGE12HA6NDE8 117 aa9.17□□□□□ -0.94
HDAC6-224ENST00000481929 PEX7O00628 323 aa9.17□□□□□ -0.94
HDAC6-224ENST00000481929 CXorf1O96002 111 aa9.17□□□□□ -0.94
HDAC6-224ENST00000481929 PPP1R1CQ8WVI7 109 aa9.17□□□□□ -0.94
HDAC6-224ENST00000481929 WFDC1Q9HC57 220 aa9.17□□□□□ -0.94
HDAC6-224ENST00000481929 PET100P0DJ07 73 aa9.16□□□□□ -0.94
HDAC6-224ENST00000481929 PRR4Q16378 134 aa9.16□□□□□ -0.94
HDAC6-224ENST00000481929 COX8CQ7Z4L0 72 aa9.16□□□□□ -0.94
HDAC6-224ENST00000481929 OR10AG1Q8NH19 301 aa9.16□□□□□ -0.94
HDAC6-224ENST00000481929 TMEM243Q9BU79 118 aa9.16□□□□□ -0.94
HDAC6-224ENST00000481929 ZNF471Q9BX82 626 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-224ENST00000481929 ZFP30Q9Y2G7 519 aa9.16□□□□□ -0.94
HDAC6-224ENST00000481929 FAM240BA0A1B0GVZ2 78 aa9.15□□□□□ -0.94
HDAC6-224ENST00000481929 A6NHS1 94 aa9.15□□□□□ -0.94
HDAC6-224ENST00000481929 ZNF674Q2M3X9 581 aa9.15□□□□□ -0.94
HDAC6-224ENST00000481929 GVQW2A0A096LPI5 108 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-224ENST00000481929 MPC2O95563 127 aa9.14□□□□□ -0.95
HDAC6-224ENST00000481929 PRR26Q8N8Z3 221 aa9.14□□□□□ -0.95
HDAC6-224ENST00000481929 SMIM17P0DL12 118 aa9.13□□□□□ -0.95
HDAC6-224ENST00000481929 HIST1H2BAQ96A08 127 aa9.13□□□□□ -0.95
HDAC6-224ENST00000481929 IGKV3OR2-268A0A0C4DH90 116 aa9.12□□□□□ -0.95
HDAC6-224ENST00000481929 UBE2L6O14933 153 aa9.12□□□□□ -0.95
HDAC6-224ENST00000481929 MBP02144 154 aa9.12□□□□□ -0.95
HDAC6-224ENST00000481929 UBE2G1P62253 170 aa9.12□□□□□ -0.95
HDAC6-224ENST00000481929 SPANXN1Q5VSR9 72 aa9.12□□□□□ -0.95
HDAC6-224ENST00000481929 INO80EQ8NBZ0 244 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-224ENST00000481929 ACTR3CQ9C0K3 210 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-224ENST00000481929 MUC21A0A140T8X8 626 aa9.11□□□□□ -0.95
HDAC6-224ENST00000481929 H2BFSP57053 126 aa9.11□□□□□ -0.95
HDAC6-224ENST00000481929 UBE2G2P60604 165 aa9.11□□□□□ -0.95
HDAC6-224ENST00000481929 FMC1Q96HJ9 113 aa9.11□□□□□ -0.95
HDAC6-224ENST00000481929 MT-ND6P03923 174 aa9.1□□□□□ -0.95
HDAC6-224ENST00000481929 DEFA3P59666 94 aa9.1□□□□□ -0.95
HDAC6-224ENST00000481929 CARD19Q96LW7 228 aa9.1□□□□□ -0.95
HDAC6-224ENST00000481929 AP1S3Q96PC3 154 aa9.1□□□□□ -0.95
HDAC6-224ENST00000481929 PSMG3Q9BT73 122 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-224ENST00000481929 SNAI2O43623 268 aa9.09□□□□□ -0.95
HDAC6-224ENST00000481929 CXCL1P09341 107 aa9.09□□□□□ -0.95
HDAC6-224ENST00000481929 ATP6V0CP27449 155 aa9.09□□□□□ -0.95
HDAC6-224ENST00000481929 SSTP61278 116 aa9.09□□□□□ -0.95
HDAC6-224ENST00000481929 CHCHD10Q8WYQ3 142 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-224ENST00000481929 NKX6-2Q9C056 277 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-224ENST00000481929 M0QY20 66 aa9.08□□□□□ -0.96
HDAC6-224ENST00000481929 OR5AL1P0C617 328 aa9.08□□□□□ -0.96
HDAC6-224ENST00000481929 SERF2P84101 59 aa9.08□□□□□ -0.96
HDAC6-224ENST00000481929 MZT2BQ6NZ67 158 aa9.08□□□□□ -0.96
HDAC6-224ENST00000481929 FER1L6-AS1Q8NA97 138 aa9.08□□□□□ -0.96
HDAC6-224ENST00000481929 DIRC1Q969H9 104 aa9.08□□□□□ -0.96
HDAC6-224ENST00000481929 SSBP4Q9BWG4 385 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-224ENST00000481929 BATF3Q9NR55 127 aa9.08□□□□□ -0.96
HDAC6-224ENST00000481929 FAM74A7A6NL05 159 aa9.07□□□□□ -0.96
HDAC6-224ENST00000481929 LTAP01374 205 aa9.07□□□□□ -0.96
HDAC6-224ENST00000481929 MGPP08493 103 aa9.07□□□□□ -0.96
HDAC6-224ENST00000481929 AMTP48728 403 aa9.07□□□□□ -0.96
HDAC6-224ENST00000481929 NKX2-5P52952 324 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-224ENST00000481929 C1orf137Q5JT78 98 aa9.07□□□□□ -0.96
HDAC6-224ENST00000481929 PGLYRP4Q96LB8 373 aa9.07□□□□□ -0.96
HDAC6-224ENST00000481929 PTTG1IPP53801 180 aa9.06□□□□□ -0.96
HDAC6-224ENST00000481929 TNFSF18Q9UNG2 199 aa9.06□□□□□ -0.96
HDAC6-224ENST00000481929 IGLV1-50A0A075B6I6 118 aa9.05□□□□□ -0.96
HDAC6-224ENST00000481929 LINC00526Q96FQ7 95 aa9.05□□□□□ -0.96
HDAC6-224ENST00000481929 CCDC32Q9BV29 185 aa9.05□□□□□ -0.96
HDAC6-224ENST00000481929 FOXI1Q12951 378 aa9.04□□□□□ -0.96
HDAC6-224ENST00000481929 GAGE2BQ13066 116 aa9.04□□□□□ -0.96
HDAC6-224ENST00000481929 COTL1Q14019 142 aa9.04□□□□□ -0.96
HDAC6-224ENST00000481929 SUMO4Q6EEV6 95 aa9.04□□□□□ -0.96
HDAC6-224ENST00000481929 ENKURQ8TC29 256 aa9.04□□□□□ -0.96
HDAC6-224ENST00000481929 IGHV1-58A0A0C4DH39 117 aa9.03□□□□□ -0.96
HDAC6-224ENST00000481929 CTXND1A0A1B0GTU2 59 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms