RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 SAPCD1Q5SSQ6 148 aa7.81□□□□□ -1.16
RAPGEF1-207ENST00000481260 COL5A1-AS1Q5SY13 56 aa7.81□□□□□ -1.16
RAPGEF1-207ENST00000481260 CFAP126Q5VTH2 177 aa7.81□□□□□ -1.16
RAPGEF1-207ENST00000481260 LYPD5Q6UWN5 251 aa7.81□□□□□ -1.16
RAPGEF1-207ENST00000481260 OR10G8Q8NGN5 311 aa7.81□□□□□ -1.16
RAPGEF1-207ENST00000481260 KCNS1Q96KK3 526 aa7.81□□□□□ -1.16
RAPGEF1-207ENST00000481260 DERL1Q9BUN8 251 aa7.81□□□□□ -1.16
RAPGEF1-207ENST00000481260 SAMD10Q9BYL1 202 aa7.81□□□□□ -1.16
RAPGEF1-207ENST00000481260 TNFRSF18Q9Y5U5 241 aa7.81□□□□□ -1.16
RAPGEF1-207ENST00000481260 ICOSQ9Y6W8 199 aa7.81□□□□□ -1.16
RAPGEF1-207ENST00000481260 H3BVH4 76 aa7.8□□□□□ -1.16
RAPGEF1-207ENST00000481260 RS1O15537 224 aa7.8□□□□□ -1.16
RAPGEF1-207ENST00000481260 NXPH4O95158 308 aa7.8□□□□□ -1.16
RAPGEF1-207ENST00000481260 ORM1P02763 201 aa7.8□□□□□ -1.16
RAPGEF1-207ENST00000481260 GATA1P15976 413 aaPredicted RBP7.8□□□□□ -1.16
RAPGEF1-207ENST00000481260 WDR73Q6P4I2 378 aa7.8□□□□□ -1.16
RAPGEF1-207ENST00000481260 UPK3BQ9BT76 320 aa7.8□□□□□ -1.16
RAPGEF1-207ENST00000481260 TRBV6-1A0A0K0K1D8 114 aa7.79□□□□□ -1.16
RAPGEF1-207ENST00000481260 FABP5P3A8MUU1 101 aa7.79□□□□□ -1.16
RAPGEF1-207ENST00000481260 UBE2G1P62253 170 aa7.79□□□□□ -1.16
RAPGEF1-207ENST00000481260 OR10J3Q5JRS4 329 aa7.79□□□□□ -1.16
RAPGEF1-207ENST00000481260 LINC00336Q6ZUF6 198 aa7.79□□□□□ -1.16
RAPGEF1-207ENST00000481260 COX8CQ7Z4L0 72 aa7.79□□□□□ -1.16
RAPGEF1-207ENST00000481260 WFDC10BQ8IUB3 73 aa7.79□□□□□ -1.16
RAPGEF1-207ENST00000481260 SLC25A29Q8N8R3 303 aa7.79□□□□□ -1.16
RAPGEF1-207ENST00000481260 FMC1Q96HJ9 113 aa7.79□□□□□ -1.16
RAPGEF1-207ENST00000481260 VAMP8Q9BV40 100 aa7.79□□□□□ -1.16
RAPGEF1-207ENST00000481260 GNB1LQ9BYB4 327 aa7.79□□□□□ -1.16
RAPGEF1-207ENST00000481260 C20orf202A1L168 122 aa7.78□□□□□ -1.16
RAPGEF1-207ENST00000481260 FBLL1A6NHQ2 334 aaKnown RBP7.78□□□□□ -1.16
RAPGEF1-207ENST00000481260 FAM162BQ5T6X4 162 aa7.78□□□□□ -1.16
RAPGEF1-207ENST00000481260 DMRTA1Q5VZB9 504 aa7.78□□□□□ -1.16
RAPGEF1-207ENST00000481260 C6orf223Q8N319 242 aa7.78□□□□□ -1.16
RAPGEF1-207ENST00000481260 ZFP30Q9Y2G7 519 aa7.78□□□□□ -1.16
RAPGEF1-207ENST00000481260 MUC21A0A0G2JKD1 596 aa7.77□□□□□ -1.17
RAPGEF1-207ENST00000481260 MUC21A0A140T8X8 626 aa7.77□□□□□ -1.17
RAPGEF1-207ENST00000481260 ARMS2P0C7Q2 107 aa7.77□□□□□ -1.17
RAPGEF1-207ENST00000481260 G0S2P27469 103 aa7.77□□□□□ -1.17
RAPGEF1-207ENST00000481260 SRIP30626 198 aa7.77□□□□□ -1.17
RAPGEF1-207ENST00000481260 FUSP35637 526 aaKnown RBP eCLIP7.77□□□□□ -1.17
RAPGEF1-207ENST00000481260 CTRLP40313 264 aa7.77□□□□□ -1.17
RAPGEF1-207ENST00000481260 ASIPP42127 132 aa7.77□□□□□ -1.17
RAPGEF1-207ENST00000481260 LINC00310P59036 64 aa7.77□□□□□ -1.17
RAPGEF1-207ENST00000481260 MRPL23Q16540 153 aaKnown RBP7.77□□□□□ -1.17
RAPGEF1-207ENST00000481260 UFSP1Q6NVU6 142 aa7.77□□□□□ -1.17
RAPGEF1-207ENST00000481260 RASL11AQ6T310 242 aa7.77□□□□□ -1.17
RAPGEF1-207ENST00000481260 C14orf178Q8N769 122 aaPredicted RBP7.77□□□□□ -1.17
RAPGEF1-207ENST00000481260 MLST8Q9BVC4 326 aa7.77□□□□□ -1.17
RAPGEF1-207ENST00000481260 OSTCQ9NRP0 149 aa7.77□□□□□ -1.17
RAPGEF1-207ENST00000481260 UQCR10Q9UDW1 63 aa7.77□□□□□ -1.17
RAPGEF1-207ENST00000481260 SERF1AO75920 110 aa7.76□□□□□ -1.17
RAPGEF1-207ENST00000481260 IGLV2-8P01709 118 aa7.76□□□□□ -1.17
RAPGEF1-207ENST00000481260 S100A4P26447 101 aaKnown RBP7.76□□□□□ -1.17
RAPGEF1-207ENST00000481260 LINC00315P59091 139 aa7.76□□□□□ -1.17
RAPGEF1-207ENST00000481260 LINC01559Q495D7 138 aa7.76□□□□□ -1.17
RAPGEF1-207ENST00000481260 NEGR1Q7Z3B1 354 aa7.76□□□□□ -1.17
RAPGEF1-207ENST00000481260 BAGE2Q86Y30 109 aa7.76□□□□□ -1.17
RAPGEF1-207ENST00000481260 Q8N3U1 123 aa7.76□□□□□ -1.17
RAPGEF1-207ENST00000481260 ORAOV1Q8WV07 137 aa7.76□□□□□ -1.17
RAPGEF1-207ENST00000481260 MRPL18Q9H0U6 180 aaKnown RBP7.76□□□□□ -1.17
RAPGEF1-207ENST00000481260 SCRT2Q9NQ03 307 aa7.76□□□□□ -1.17
RAPGEF1-207ENST00000481260 A0A087WWL8 130 aa7.75□□□□□ -1.17
RAPGEF1-207ENST00000481260 SIVA1O15304 175 aa7.75□□□□□ -1.17
RAPGEF1-207ENST00000481260 NUPR1O60356 82 aa7.75□□□□□ -1.17
RAPGEF1-207ENST00000481260 HLA-DQA1P01909 254 aa7.75□□□□□ -1.17
RAPGEF1-207ENST00000481260 SLAQ13239 276 aa7.75□□□□□ -1.17
RAPGEF1-207ENST00000481260 PRR27Q6MZM9 219 aa7.75□□□□□ -1.17
RAPGEF1-207ENST00000481260 Q6ZRN7 208 aaPredicted RBP7.75□□□□□ -1.17
RAPGEF1-207ENST00000481260 PTH2Q96A98 100 aa7.75□□□□□ -1.17
RAPGEF1-207ENST00000481260 ABCA13Q86UQ4 5058 aa7.74□□□□□ -1.17
RAPGEF1-207ENST00000481260 TRBV20OR9-2A0A075B6H5 130 aa7.74□□□□□ -1.17
RAPGEF1-207ENST00000481260 M0R381 172 aa7.74□□□□□ -1.17
RAPGEF1-207ENST00000481260 ANKRD39Q53RE8 183 aa7.74□□□□□ -1.17
RAPGEF1-207ENST00000481260 CENPWQ5EE01 88 aa7.74□□□□□ -1.17
RAPGEF1-207ENST00000481260 BAGE3Q86Y29 109 aa7.74□□□□□ -1.17
RAPGEF1-207ENST00000481260 Q8N976 141 aa7.74□□□□□ -1.17
RAPGEF1-207ENST00000481260 OR2D3Q8NGH3 330 aa7.74□□□□□ -1.17
RAPGEF1-207ENST00000481260 GAGE12JA6NER3 117 aa7.73□□□□□ -1.17
RAPGEF1-207ENST00000481260 NPSP0C0P6 89 aa7.73□□□□□ -1.17
RAPGEF1-207ENST00000481260 LINC00694P0DN24 101 aa7.73□□□□□ -1.17
RAPGEF1-207ENST00000481260 KRTAP10-2P60368 255 aa7.73□□□□□ -1.17
RAPGEF1-207ENST00000481260 RPS20P60866 119 aaKnown RBP7.73□□□□□ -1.17
RAPGEF1-207ENST00000481260 GAGE4Q13068 117 aa7.73□□□□□ -1.17
RAPGEF1-207ENST00000481260 GAGE5Q13069 117 aa7.73□□□□□ -1.17
RAPGEF1-207ENST00000481260 PMCHL1Q16048 86 aa7.73□□□□□ -1.17
RAPGEF1-207ENST00000481260 GAGE13Q4V321 117 aa7.73□□□□□ -1.17
RAPGEF1-207ENST00000481260 OR10AG1Q8NH19 301 aa7.73□□□□□ -1.17
RAPGEF1-207ENST00000481260 OCC1Q8TAD7 63 aa7.73□□□□□ -1.17
RAPGEF1-207ENST00000481260 V9GYV3 84 aa7.73□□□□□ -1.17
RAPGEF1-207ENST00000481260 DNAH8Q96JB1 4490 aa7.73□□□□□ -1.17
RAPGEF1-207ENST00000481260 TRBV6-4A0A1B0GX49 114 aa7.72□□□□□ -1.17
RAPGEF1-207ENST00000481260 CRYGDP07320 174 aa7.72□□□□□ -1.17
RAPGEF1-207ENST00000481260 IGLC3P0DOY3 106 aa7.72□□□□□ -1.17
RAPGEF1-207ENST00000481260 FAM74A4Q5TZK3 123 aa7.72□□□□□ -1.17
RAPGEF1-207ENST00000481260 K7EN84 100 aa7.71□□□□□ -1.18
RAPGEF1-207ENST00000481260 K7EP13 123 aa7.71□□□□□ -1.18
RAPGEF1-207ENST00000481260 RHOHQ15669 191 aa7.71□□□□□ -1.18
RAPGEF1-207ENST00000481260 SPATA45Q537H7 98 aa7.71□□□□□ -1.18
RAPGEF1-207ENST00000481260 TTC32Q5I0X7 151 aa7.71□□□□□ -1.18
RAPGEF1-207ENST00000481260 TMEM136Q6ZRR5 245 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms