RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 A0A087WSZ3 146 aa4.83□□□□□ -1.64
LSM5-210ENST00000480956 RBAKDNA6NC62 111 aa4.83□□□□□ -1.64
LSM5-210ENST00000480956 HMGA1P17096 107 aaKnown RBP4.83□□□□□ -1.64
LSM5-210ENST00000480956 HINT1P49773 126 aaPredicted RBP4.83□□□□□ -1.64
LSM5-210ENST00000480956 ZNF791Q3KP31 576 aaPredicted RBP4.83□□□□□ -1.64
LSM5-210ENST00000480956 SBSPONQ8IVN8 264 aa4.83□□□□□ -1.64
LSM5-210ENST00000480956 Q8N8P6 123 aa4.83□□□□□ -1.64
LSM5-210ENST00000480956 CCDC88CQ9P219 2028 aa4.83□□□□□ -1.64
LSM5-210ENST00000480956 CPAMD8Q8IZJ3 1885 aa4.83□□□□□ -1.64
LSM5-210ENST00000480956 TRAV40A0A0B4J280 105 aa4.83□□□□□ -1.64
LSM5-210ENST00000480956 ADCYAP1P18509 176 aa4.83□□□□□ -1.64
LSM5-210ENST00000480956 DSCR10P59022 87 aa4.83□□□□□ -1.64
LSM5-210ENST00000480956 Q0VG73 95 aa4.83□□□□□ -1.64
LSM5-210ENST00000480956 SPANXN1Q5VSR9 72 aa4.83□□□□□ -1.64
LSM5-210ENST00000480956 CCL26Q9Y258 94 aa4.83□□□□□ -1.64
LSM5-210ENST00000480956 USP34Q70CQ2 3546 aa4.83□□□□□ -1.64
LSM5-210ENST00000480956 TRIOO75962 3097 aa4.82□□□□□ -1.64
LSM5-210ENST00000480956 IGLV2-18A0A075B6J9 118 aa4.82□□□□□ -1.64
LSM5-210ENST00000480956 IGLV3-16A0A075B6K0 115 aa4.82□□□□□ -1.64
LSM5-210ENST00000480956 TMSB15BA0A087X1C1 80 aa4.82□□□□□ -1.64
LSM5-210ENST00000480956 PIGBOS1A0A0B4J2F0 54 aa4.82□□□□□ -1.64
LSM5-210ENST00000480956 UBE2L5PA0A1B0GUS4 154 aa4.82□□□□□ -1.64
LSM5-210ENST00000480956 H3BQ15 152 aa4.82□□□□□ -1.64
LSM5-210ENST00000480956 UBE2L3P68036 154 aaKnown RBP4.82□□□□□ -1.64
LSM5-210ENST00000480956 INSL4Q14641 139 aa4.82□□□□□ -1.64
LSM5-210ENST00000480956 C6orf52Q5T4I8 152 aa4.82□□□□□ -1.64
LSM5-210ENST00000480956 ASAH2BP0C7U1 165 aa4.81□□□□□ -1.64
LSM5-210ENST00000480956 ATP5EP56381 51 aaPredicted RBP4.81□□□□□ -1.64
LSM5-210ENST00000480956 C5orf38Q86SI9 138 aa4.81□□□□□ -1.64
LSM5-210ENST00000480956 NDUFB11Q9NX14 153 aa4.81□□□□□ -1.64
LSM5-210ENST00000480956 PRR14LQ5THK1 2151 aa4.81□□□□□ -1.64
LSM5-210ENST00000480956 MYO18AQ92614 2054 aaKnown RBP4.81□□□□□ -1.64
LSM5-210ENST00000480956 TCRBV4S1A1TA0A5B7 111 aa4.8□□□□□ -1.64
LSM5-210ENST00000480956 ERC2-IT1O76042 136 aa4.8□□□□□ -1.64
LSM5-210ENST00000480956 IQCJQ1A5X6 159 aa4.8□□□□□ -1.64
LSM5-210ENST00000480956 C10orf82Q8WW14 230 aa4.8□□□□□ -1.64
LSM5-210ENST00000480956 PRO3102Q9H379 93 aa4.8□□□□□ -1.64
LSM5-210ENST00000480956 NPVFQ9HCQ7 196 aa4.8□□□□□ -1.64
LSM5-210ENST00000480956 DIDO1Q9BTC0 2240 aaKnown RBP4.8□□□□□ -1.64
LSM5-210ENST00000480956 MYLKQ15746 1914 aa4.8□□□□□ -1.64
LSM5-210ENST00000480956 TRAV10A0A0B4J240 114 aa4.8□□□□□ -1.64
LSM5-210ENST00000480956 ODF3BA8MYP8 253 aa4.8□□□□□ -1.64
LSM5-210ENST00000480956 IBA57-AS1B1ANH7 110 aa4.8□□□□□ -1.64
LSM5-210ENST00000480956 G3V3Q6 166 aa4.8□□□□□ -1.64
LSM5-210ENST00000480956 RPL26P61254 145 aaKnown RBP4.8□□□□□ -1.64
LSM5-210ENST00000480956 NCBP2-AS2Q69YL0 99 aa4.8□□□□□ -1.64
LSM5-210ENST00000480956 BPTFQ12830 3046 aa4.79□□□□□ -1.64
LSM5-210ENST00000480956 MUC3AQ02505 3323 aa4.79□□□□□ -1.64
LSM5-210ENST00000480956 KIAA1549Q9HCM3 1950 aa4.79□□□□□ -1.64
LSM5-210ENST00000480956 IGKV3D-11A0A0A0MRZ8 115 aa4.79□□□□□ -1.64
LSM5-210ENST00000480956 DEFB113Q30KQ7 82 aa4.79□□□□□ -1.64
LSM5-210ENST00000480956 SPRNQ5BIV9 151 aa4.79□□□□□ -1.64
LSM5-210ENST00000480956 S100A7L2Q5SY68 101 aa4.79□□□□□ -1.64
LSM5-210ENST00000480956 NDUFA12Q9UI09 145 aa4.79□□□□□ -1.64
LSM5-210ENST00000480956 PSORS1C2Q9UIG4 136 aa4.79□□□□□ -1.64
LSM5-210ENST00000480956 ANKRD36A6QL64 1941 aa4.79□□□□□ -1.64
LSM5-210ENST00000480956 NACAE9PAV3 2078 aa4.78□□□□□ -1.64
LSM5-210ENST00000480956 GNGT2O14610 69 aa4.78□□□□□ -1.64
LSM5-210ENST00000480956 RBM3P98179 157 aaKnown RBP4.78□□□□□ -1.64
LSM5-210ENST00000480956 LHFPL6Q9Y693 200 aa4.78□□□□□ -1.64
LSM5-210ENST00000480956 DEFB123Q8N688 67 aa4.77□□□□□ -1.65
LSM5-210ENST00000480956 TMEM141Q96I45 108 aa4.77□□□□□ -1.65
LSM5-210ENST00000480956 TRAV2A0A0B4J234 112 aa4.77□□□□□ -1.65
LSM5-210ENST00000480956 SMIM31A0A1B0GVY4 71 aa4.77□□□□□ -1.65
LSM5-210ENST00000480956 MIR22HGQ0VDD5 57 aa4.77□□□□□ -1.65
LSM5-210ENST00000480956 KIAA1549LQ6ZVL6 1849 aa4.76□□□□□ -1.65
LSM5-210ENST00000480956 PEA15Q15121 130 aa4.76□□□□□ -1.65
LSM5-210ENST00000480956 C2orf82Q6UX34 121 aa4.76□□□□□ -1.65
LSM5-210ENST00000480956 ZCCHC23Q6ZST2 131 aa4.76□□□□□ -1.65
LSM5-210ENST00000480956 Q9BRP9 147 aa4.76□□□□□ -1.65
LSM5-210ENST00000480956 MYO15AQ9UKN7 3530 aa4.76□□□□□ -1.65
LSM5-210ENST00000480956 MUC4Q99102 2169 aa4.76□□□□□ -1.65
LSM5-210ENST00000480956 DNAH14Q0VDD8 3507 aa4.75□□□□□ -1.65
LSM5-210ENST00000480956 IL9P15248 144 aa4.75□□□□□ -1.65
LSM5-210ENST00000480956 A0A0C4DFX4 3053 aa4.75□□□□□ -1.65
LSM5-210ENST00000480956 TRAV12-1A0A0B4J245 112 aa4.75□□□□□ -1.65
LSM5-210ENST00000480956 MUC21A0A140T8X8 626 aa4.75□□□□□ -1.65
LSM5-210ENST00000480956 ASIPP42127 132 aa4.75□□□□□ -1.65
LSM5-210ENST00000480956 LY6EQ16553 131 aa4.75□□□□□ -1.65
LSM5-210ENST00000480956 MED9Q9NWA0 146 aa4.75□□□□□ -1.65
LSM5-210ENST00000480956 KIAA2026Q5HYC2 2103 aa4.74□□□□□ -1.65
LSM5-210ENST00000480956 A0A1W2PNM2 257 aa4.74□□□□□ -1.65
LSM5-210ENST00000480956 A6NIN4 97 aa4.74□□□□□ -1.65
LSM5-210ENST00000480956 PYDC2Q56P42 97 aa4.74□□□□□ -1.65
LSM5-210ENST00000480956 RPL7L1Q6DKI1 246 aaKnown RBP4.74□□□□□ -1.65
LSM5-210ENST00000480956 CLECL1Q8IZS7 167 aa4.74□□□□□ -1.65
LSM5-210ENST00000480956 Q8N9L7 120 aa4.74□□□□□ -1.65
LSM5-210ENST00000480956 C9orf163Q8N9P6 203 aa4.74□□□□□ -1.65
LSM5-210ENST00000480956 DMDP11532 3685 aa4.74□□□□□ -1.65
LSM5-210ENST00000480956 ARHGAP32A7KAX9 2087 aa4.73□□□□□ -1.65
LSM5-210ENST00000480956 COL4A2P08572 1712 aa4.73□□□□□ -1.65
LSM5-210ENST00000480956 TRAV17A0A0B4J275 112 aa4.73□□□□□ -1.65
LSM5-210ENST00000480956 IGKV3-11P04433 115 aa4.73□□□□□ -1.65
LSM5-210ENST00000480956 FAM74A1Q5RGS3 127 aa4.73□□□□□ -1.65
LSM5-210ENST00000480956 COMMD6Q7Z4G1 85 aa4.73□□□□□ -1.65
LSM5-210ENST00000480956 Q8TAT8 98 aa4.73□□□□□ -1.65
LSM5-210ENST00000480956 PMCHL2Q9BQD1 86 aa4.73□□□□□ -1.65
LSM5-210ENST00000480956 WDFY4Q6ZS81 3184 aa4.73□□□□□ -1.65
LSM5-210ENST00000480956 MUC22E2RYF6 1773 aaPredicted RBP4.73□□□□□ -1.65
LSM5-210ENST00000480956 CCL22O00626 93 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms