RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 ARHGEF10O15013 1369 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 RGPD3A6NKT7 1758 aaPredicted RBP0.35□□□□□ -2.35
CALD1-219ENST00000480638 RGPD4Q7Z3J3 1758 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 N4BP2Q86UW6 1770 aaPredicted RBP0.35□□□□□ -2.35
CALD1-219ENST00000480638 URB2Q14146 1524 aaKnown RBP0.35□□□□□ -2.35
CALD1-219ENST00000480638 TRAV36DV7A0A075B6V5 113 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 J3KT08 172 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 PIN1P1O15428 100 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 PFDN1O60925 122 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 FAM107AO95990 144 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 PPYP01298 95 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 IGLV3-1P01715 115 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 IGHV3-33P01772 117 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 MT-ND4LP03901 98 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 SLC25A5P05141 298 aaKnown RBP0.35□□□□□ -2.35
CALD1-219ENST00000480638 SLC25A4P12235 298 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 SDC4P31431 198 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 RPL22P35268 128 aaKnown RBP0.35□□□□□ -2.35
CALD1-219ENST00000480638 EFNA4P52798 201 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 MAXP61244 160 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 RPS28P62857 69 aaKnown RBP0.35□□□□□ -2.35
CALD1-219ENST00000480638 MRPS36P82909 103 aaKnown RBP0.35□□□□□ -2.35
CALD1-219ENST00000480638 CIRBPQ14011 172 aaKnown RBP0.35□□□□□ -2.35
CALD1-219ENST00000480638 KRTAP19-6Q3LI70 58 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 GLIPR1L1Q6UWM5 242 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 TEN1Q86WV5 123 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 TMEM35BQ8NCS4 154 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 OR4B1Q8NGF8 309 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 OR51A4Q8NGJ6 313 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 OR10AG1Q8NH19 301 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 BRK1Q8WUW1 75 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 LXNQ9BS40 222 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 CST11Q9H112 138 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 WFDC10AQ9H1F0 79 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 TMEM14CQ9P0S9 112 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 JPT1Q9UK76 154 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 TPRKBQ9Y3C4 175 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 UNC13CQ8NB66 2214 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 ARHGEF5Q12774 1597 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 MROH2BQ7Z745 1585 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 SAMD9LQ8IVG5 1584 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 CLTCL1P53675 1640 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 MYH3P11055 1940 aa0.34□□□□□ -2.35
CALD1-219ENST00000480638 MYH2Q9UKX2 1941 aa0.34□□□□□ -2.35
CALD1-219ENST00000480638 ZFYVE16Q7Z3T8 1539 aa0.34□□□□□ -2.35
CALD1-219ENST00000480638 NHSQ6T4R5 1651 aa0.34□□□□□ -2.35
CALD1-219ENST00000480638 FREM3P0C091 2139 aa0.34□□□□□ -2.35
CALD1-219ENST00000480638 C3orf85A0A1B0GTC6 90 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 A0A1B0GX51 115 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 C9JAW5 83 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 JMJD7-PLA2G4BH0Y9G9 81 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 DEGS1O15121 323 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 ARPC5O15511 151 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 TNFSF15O95150 251 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 TRACP01848 142 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 HBDP02042 147 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 TCRAP04437 139 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 CD14P08571 375 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 CCL4P13236 92 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 TPT1P13693 172 aaKnown RBP0.34□□□□□ -2.36
CALD1-219ENST00000480638 NDUFA6P56556 154 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 BLCAPP62952 87 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 HAGHLQ6PII5 290 aaPredicted RBP0.34□□□□□ -2.36
CALD1-219ENST00000480638 OR5A2Q8NGI9 324 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 SKA2Q8WVK7 121 aaPredicted RBP0.34□□□□□ -2.36
CALD1-219ENST00000480638 PRG4Q92954 1404 aaPredicted RBP0.34□□□□□ -2.36
CALD1-219ENST00000480638 MCEEQ96PE7 176 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 C19orf12Q9NSK7 152 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 TNFSF18Q9UNG2 199 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 HIGD1AQ9Y241 93 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 HSPB11Q9Y547 144 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 SCRIBQ14160 1630 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 NKTRP30414 1462 aaKnown RBP0.34□□□□□ -2.36
CALD1-219ENST00000480638 DSPPQ9NZW4 1301 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 TET1Q8NFU7 2136 aa0.34□□□□□ -2.36
CALD1-219ENST00000480638 E9PCH4 1651 aa0.33□□□□□ -2.36
CALD1-219ENST00000480638 C5P01031 1676 aa0.33□□□□□ -2.36
CALD1-219ENST00000480638 MED23Q9ULK4 1368 aa0.33□□□□□ -2.36
CALD1-219ENST00000480638 NUP210LQ5VU65 1888 aa0.33□□□□□ -2.36
CALD1-219ENST00000480638 LY75O60449 1722 aa0.33□□□□□ -2.36
CALD1-219ENST00000480638 OVOS2A0A0G2JMS6 1433 aa0.33□□□□□ -2.36
CALD1-219ENST00000480638 TRAV23DV6A0A075B6W5 121 aa0.33□□□□□ -2.36
CALD1-219ENST00000480638 A0A096LPI6 279 aa0.33□□□□□ -2.36
CALD1-219ENST00000480638 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.33□□□□□ -2.36
CALD1-219ENST00000480638 LOC107984156A0A0G2JMH3 177 aa0.33□□□□□ -2.36
CALD1-219ENST00000480638 A6NN06 94 aa0.33□□□□□ -2.36
CALD1-219ENST00000480638 C5orf58C9J3I9 102 aa0.33□□□□□ -2.36
CALD1-219ENST00000480638 SAA1P0DJI8 122 aaPredicted RBP0.33□□□□□ -2.36
CALD1-219ENST00000480638 FXYD4P59646 89 aa0.33□□□□□ -2.36
CALD1-219ENST00000480638 ALX1Q15699 326 aa0.33□□□□□ -2.36
CALD1-219ENST00000480638 NEDD8Q15843 81 aa0.33□□□□□ -2.36
CALD1-219ENST00000480638 TMEM244Q5VVB8 128 aa0.33□□□□□ -2.36
CALD1-219ENST00000480638 CSAG1Q6PB30 78 aa0.33□□□□□ -2.36
CALD1-219ENST00000480638 CASC2Q6XLA1 102 aa0.33□□□□□ -2.36
CALD1-219ENST00000480638 ARL17AQ8IVW1 177 aa0.33□□□□□ -2.36
CALD1-219ENST00000480638 C5orf17Q8NAS9 161 aa0.33□□□□□ -2.36
CALD1-219ENST00000480638 PLPP5Q8NEB5 264 aa0.33□□□□□ -2.36
CALD1-219ENST00000480638 OR5AK2Q8NH90 309 aa0.33□□□□□ -2.36
CALD1-219ENST00000480638 ZNF431Q8TF32 576 aaPredicted RBP0.33□□□□□ -2.36
CALD1-219ENST00000480638 LPAR5Q9H1C0 372 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms