RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 FHITP49789 147 aa7.18□□□□□ -1.26
TTC28-206ENST00000480563 SUMO1P63165 101 aaKnown RBP7.18□□□□□ -1.26
TTC28-206ENST00000480563 MPV17L2Q567V2 206 aa7.18□□□□□ -1.26
TTC28-206ENST00000480563 HIST1H2BAQ96A08 127 aa7.18□□□□□ -1.26
TTC28-206ENST00000480563 LINC01600Q96MT4 127 aa7.18□□□□□ -1.26
TTC28-206ENST00000480563 MANBALQ9NQG1 85 aa7.18□□□□□ -1.26
TTC28-206ENST00000480563 EPDR1Q9UM22 224 aa7.18□□□□□ -1.26
TTC28-206ENST00000480563 A0A087WYN8 130 aa7.17□□□□□ -1.26
TTC28-206ENST00000480563 TRBV10-1A0A0K0K1A3 114 aa7.17□□□□□ -1.26
TTC28-206ENST00000480563 FAM74A7A6NL05 159 aa7.17□□□□□ -1.26
TTC28-206ENST00000480563 B4DEV8 164 aa7.17□□□□□ -1.26
TTC28-206ENST00000480563 PEX7O00628 323 aa7.17□□□□□ -1.26
TTC28-206ENST00000480563 ARMS2P0C7Q2 107 aa7.17□□□□□ -1.26
TTC28-206ENST00000480563 NKX2-5P52952 324 aaPredicted RBP7.17□□□□□ -1.26
TTC28-206ENST00000480563 UBE2G1P62253 170 aa7.17□□□□□ -1.26
TTC28-206ENST00000480563 SFRP2Q96HF1 295 aa7.17□□□□□ -1.26
TTC28-206ENST00000480563 GRIFINA4D1Z8 144 aa7.16□□□□□ -1.26
TTC28-206ENST00000480563 GAS8-AS1O95177 125 aa7.16□□□□□ -1.26
TTC28-206ENST00000480563 TAGLN2P37802 199 aaKnown RBP7.16□□□□□ -1.26
TTC28-206ENST00000480563 AKR1C3P42330 323 aa7.16□□□□□ -1.26
TTC28-206ENST00000480563 BLOC1S1P78537 153 aa7.16□□□□□ -1.26
TTC28-206ENST00000480563 KRTAP26-1Q6PEX3 210 aa7.16□□□□□ -1.26
TTC28-206ENST00000480563 CLRN3Q8NCR9 226 aa7.16□□□□□ -1.26
TTC28-206ENST00000480563 RNF185Q96GF1 192 aa7.16□□□□□ -1.26
TTC28-206ENST00000480563 CHCHD5Q9BSY4 110 aa7.16□□□□□ -1.26
TTC28-206ENST00000480563 GNG13Q9P2W3 67 aa7.16□□□□□ -1.26
TTC28-206ENST00000480563 TRAV1-1A0A0B4J248 108 aa7.15□□□□□ -1.26
TTC28-206ENST00000480563 KRBOX1C9JBD0 128 aa7.15□□□□□ -1.26
TTC28-206ENST00000480563 M0R381 172 aa7.15□□□□□ -1.26
TTC28-206ENST00000480563 PHOX2AO14813 284 aa7.15□□□□□ -1.26
TTC28-206ENST00000480563 PAGE4O60829 102 aa7.15□□□□□ -1.26
TTC28-206ENST00000480563 CHTF8P0CG12 524 aa7.15□□□□□ -1.26
TTC28-206ENST00000480563 CNBPP62633 177 aaKnown RBP7.15□□□□□ -1.26
TTC28-206ENST00000480563 DNLZQ5SXM8 178 aa7.15□□□□□ -1.26
TTC28-206ENST00000480563 ALKAL2Q6UX46 152 aa7.15□□□□□ -1.26
TTC28-206ENST00000480563 OR10G8Q8NGN5 311 aa7.15□□□□□ -1.26
TTC28-206ENST00000480563 FMC1Q96HJ9 113 aa7.15□□□□□ -1.26
TTC28-206ENST00000480563 PRR34Q9NV39 138 aa7.15□□□□□ -1.26
TTC28-206ENST00000480563 PHLDA3Q9Y5J5 127 aa7.15□□□□□ -1.26
TTC28-206ENST00000480563 IGHV3-64A0A075B6Q5 118 aa7.14□□□□□ -1.27
TTC28-206ENST00000480563 TRAV34A0A0B4J273 112 aa7.14□□□□□ -1.27
TTC28-206ENST00000480563 M0R036 132 aa7.14□□□□□ -1.27
TTC28-206ENST00000480563 S100A9P06702 114 aaKnown RBP7.14□□□□□ -1.27
TTC28-206ENST00000480563 PKIAP61925 76 aa7.14□□□□□ -1.27
TTC28-206ENST00000480563 CLPSL2Q6UWE3 100 aa7.14□□□□□ -1.27
TTC28-206ENST00000480563 Q86TA4 180 aa7.14□□□□□ -1.27
TTC28-206ENST00000480563 A0A0J9YXV3 536 aa7.13□□□□□ -1.27
TTC28-206ENST00000480563 hDV102S1A0JD36 115 aa7.13□□□□□ -1.27
TTC28-206ENST00000480563 CRIP1P50238 77 aa7.13□□□□□ -1.27
TTC28-206ENST00000480563 KRTAP10-8P60410 259 aa7.13□□□□□ -1.27
TTC28-206ENST00000480563 LINC00269Q8N2A0 174 aa7.13□□□□□ -1.27
TTC28-206ENST00000480563 SPACA4Q8TDM5 124 aa7.13□□□□□ -1.27
TTC28-206ENST00000480563 C7orf33Q8WU49 177 aa7.13□□□□□ -1.27
TTC28-206ENST00000480563 PLAC8Q9NZF1 115 aa7.13□□□□□ -1.27
TTC28-206ENST00000480563 KIF25-AS1Q9Y6Z4 181 aa7.13□□□□□ -1.27
TTC28-206ENST00000480563 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.12□□□□□ -1.27
TTC28-206ENST00000480563 PDE6DO43924 150 aa7.12□□□□□ -1.27
TTC28-206ENST00000480563 BCL2P10415 239 aa7.12□□□□□ -1.27
TTC28-206ENST00000480563 RBX1P62877 108 aa7.12□□□□□ -1.27
TTC28-206ENST00000480563 WDR73Q6P4I2 378 aa7.12□□□□□ -1.27
TTC28-206ENST00000480563 ZFP82Q8N141 532 aa7.12□□□□□ -1.27
TTC28-206ENST00000480563 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.12□□□□□ -1.27
TTC28-206ENST00000480563 NEXN-AS1Q8NBZ9 246 aa7.12□□□□□ -1.27
TTC28-206ENST00000480563 ZFP30Q9Y2G7 519 aa7.12□□□□□ -1.27
TTC28-206ENST00000480563 IGLV10-54A0A075B6I4 117 aa7.11□□□□□ -1.27
TTC28-206ENST00000480563 TMSB15BA0A087X1C1 80 aa7.11□□□□□ -1.27
TTC28-206ENST00000480563 TRBV6-1A0A0K0K1D8 114 aa7.11□□□□□ -1.27
TTC28-206ENST00000480563 SCO2A0A1W2PP80 73 aa7.11□□□□□ -1.27
TTC28-206ENST00000480563 SH2D1AO60880 128 aa7.11□□□□□ -1.27
TTC28-206ENST00000480563 SLPIP03973 132 aa7.11□□□□□ -1.27
TTC28-206ENST00000480563 RAB4BP61018 213 aa7.11□□□□□ -1.27
TTC28-206ENST00000480563 MEF2BQ02080 365 aaPredicted RBP7.11□□□□□ -1.27
TTC28-206ENST00000480563 GAGE6Q13070 117 aa7.11□□□□□ -1.27
TTC28-206ENST00000480563 NTM-AS1Q6ZSK4 140 aa7.11□□□□□ -1.27
TTC28-206ENST00000480563 GTSF1Q8WW33 167 aa7.11□□□□□ -1.27
TTC28-206ENST00000480563 AP5S1Q9NUS5 200 aa7.11□□□□□ -1.27
TTC28-206ENST00000480563 VAX2Q9UIW0 290 aa7.11□□□□□ -1.27
TTC28-206ENST00000480563 ZNF56Q15929 161 aa7.1□□□□□ -1.27
TTC28-206ENST00000480563 TMEM97Q5BJF2 176 aa7.1□□□□□ -1.27
TTC28-206ENST00000480563 PRR27Q6MZM9 219 aa7.1□□□□□ -1.27
TTC28-206ENST00000480563 LTAP01374 205 aa7.09□□□□□ -1.27
TTC28-206ENST00000480563 CCL20P78556 96 aa7.09□□□□□ -1.27
TTC28-206ENST00000480563 PRR3P79522 188 aaKnown RBP7.09□□□□□ -1.27
TTC28-206ENST00000480563 REG3AQ06141 175 aa7.09□□□□□ -1.27
TTC28-206ENST00000480563 FAM162BQ5T6X4 162 aa7.09□□□□□ -1.27
TTC28-206ENST00000480563 C11orf52Q96A22 123 aa7.09□□□□□ -1.27
TTC28-206ENST00000480563 DERL1Q9BUN8 251 aa7.09□□□□□ -1.27
TTC28-206ENST00000480563 REG3GQ6UW15 175 aa7.08□□□□□ -1.28
TTC28-206ENST00000480563 COX8CQ7Z4L0 72 aa7.08□□□□□ -1.28
TTC28-206ENST00000480563 BAGE2Q86Y30 109 aa7.08□□□□□ -1.28
TTC28-206ENST00000480563 BIN3Q9NQY0 253 aa7.08□□□□□ -1.28
TTC28-206ENST00000480563 MED9Q9NWA0 146 aa7.08□□□□□ -1.28
TTC28-206ENST00000480563 TRBV25-1A0A075B6N4 114 aa7.07□□□□□ -1.28
TTC28-206ENST00000480563 TRAV8-4A0A0B4J246 113 aa7.07□□□□□ -1.28
TTC28-206ENST00000480563 P01737 135 aa7.07□□□□□ -1.28
TTC28-206ENST00000480563 RPL35P42766 123 aaKnown RBP7.07□□□□□ -1.28
TTC28-206ENST00000480563 GNG4P50150 75 aa7.07□□□□□ -1.28
TTC28-206ENST00000480563 COX6A2Q02221 97 aa7.07□□□□□ -1.28
TTC28-206ENST00000480563 MAJINQ3KP22 176 aa7.07□□□□□ -1.28
TTC28-206ENST00000480563 LINC01559Q495D7 138 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms