RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 LYRM7Q5U5X0 104 aa5.95□□□□□ -1.46
USP54-212ENST00000480210 ATP6V0E2Q8NHE4 81 aa5.95□□□□□ -1.46
USP54-212ENST00000480210 SGK494Q96LW2 274 aa5.95□□□□□ -1.46
USP54-212ENST00000480210 SPXQ9BT56 116 aa5.95□□□□□ -1.46
USP54-212ENST00000480210 MLST8Q9BVC4 326 aa5.95□□□□□ -1.46
USP54-212ENST00000480210 HIGD1BQ9P298 99 aa5.95□□□□□ -1.46
USP54-212ENST00000480210 TIMM8BQ9Y5J9 83 aaPredicted RBP5.95□□□□□ -1.46
USP54-212ENST00000480210 A0A0J9YWU9 116 aa5.94□□□□□ -1.46
USP54-212ENST00000480210 A0A1W2PPM0 123 aa5.94□□□□□ -1.46
USP54-212ENST00000480210 SMIM13P0DJ93 91 aa5.94□□□□□ -1.46
USP54-212ENST00000480210 RBMY1A1P0DJD3 496 aaKnown RBP5.94□□□□□ -1.46
USP54-212ENST00000480210 RBMY1CP0DJD4 496 aa5.94□□□□□ -1.46
USP54-212ENST00000480210 PRB4P10163 310 aaPredicted RBP5.94□□□□□ -1.46
USP54-212ENST00000480210 KIR3DS1Q14943 382 aa5.94□□□□□ -1.46
USP54-212ENST00000480210 RBMY1FQ15415 496 aaKnown RBP5.94□□□□□ -1.46
USP54-212ENST00000480210 TAL2Q16559 108 aa5.94□□□□□ -1.46
USP54-212ENST00000480210 LINC01545Q5VT33 79 aa5.94□□□□□ -1.46
USP54-212ENST00000480210 C11orf45Q8TAV5 145 aa5.94□□□□□ -1.46
USP54-212ENST00000480210 C8orf49Q96NF6 230 aa5.94□□□□□ -1.46
USP54-212ENST00000480210 SPCS1Q9Y6A9 102 aa5.94□□□□□ -1.46
USP54-212ENST00000480210 TRAV8-6A0A0B4J262 113 aa5.93□□□□□ -1.46
USP54-212ENST00000480210 A8MWL6 223 aa5.93□□□□□ -1.46
USP54-212ENST00000480210 TMEM262E9PQX1 116 aa5.93□□□□□ -1.46
USP54-212ENST00000480210 C3orf84H3BNL1 204 aa5.93□□□□□ -1.46
USP54-212ENST00000480210 HTN1P15515 57 aa5.93□□□□□ -1.46
USP54-212ENST00000480210 ZNF415Q09FC8 603 aa5.93□□□□□ -1.46
USP54-212ENST00000480210 DAZ2Q13117 558 aaKnown RBP5.93□□□□□ -1.46
USP54-212ENST00000480210 LGALS9BQ3B8N2 356 aa5.93□□□□□ -1.46
USP54-212ENST00000480210 PRR9Q5T870 116 aa5.93□□□□□ -1.46
USP54-212ENST00000480210 RNASEKQ6P5S7 137 aaKnown RBP5.93□□□□□ -1.46
USP54-212ENST00000480210 DAZAP1Q96EP5 407 aaKnown RBP5.93□□□□□ -1.46
USP54-212ENST00000480210 DKK2Q9UBU2 259 aa5.93□□□□□ -1.46
USP54-212ENST00000480210 NBEAL2Q6ZNJ1 2754 aa5.93□□□□□ -1.46
USP54-212ENST00000480210 ZNF80P51504 273 aaPredicted RBP5.92□□□□□ -1.46
USP54-212ENST00000480210 HBBP68871 147 aa5.92□□□□□ -1.46
USP54-212ENST00000480210 CENPWQ5EE01 88 aa5.92□□□□□ -1.46
USP54-212ENST00000480210 PIK3CD-AS1Q5SR53 167 aa5.92□□□□□ -1.46
USP54-212ENST00000480210 LCE2DQ5TA82 110 aaPredicted RBP5.92□□□□□ -1.46
USP54-212ENST00000480210 PTH2Q96A98 100 aa5.92□□□□□ -1.46
USP54-212ENST00000480210 ZC2HC1AQ96GY0 325 aa5.92□□□□□ -1.46
USP54-212ENST00000480210 GEMIN7Q9H840 131 aaKnown RBP5.92□□□□□ -1.46
USP54-212ENST00000480210 TRBV20OR9-2A0A075B6H5 130 aa5.91□□□□□ -1.46
USP54-212ENST00000480210 SH2D1AO60880 128 aa5.91□□□□□ -1.46
USP54-212ENST00000480210 TSPAN13O95857 204 aa5.91□□□□□ -1.46
USP54-212ENST00000480210 ORM1P02763 201 aa5.91□□□□□ -1.46
USP54-212ENST00000480210 MED14OSP0DP75 135 aa5.91□□□□□ -1.46
USP54-212ENST00000480210 CRIP1P50238 77 aa5.91□□□□□ -1.46
USP54-212ENST00000480210 CRYBA4P53673 196 aa5.91□□□□□ -1.46
USP54-212ENST00000480210 FAM222AQ5U5X8 452 aa5.91□□□□□ -1.46
USP54-212ENST00000480210 LGALS9CQ6DKI2 356 aa5.91□□□□□ -1.46
USP54-212ENST00000480210 C11orf72Q8NBR9 251 aa5.91□□□□□ -1.46
USP54-212ENST00000480210 C18orf15Q96N68 181 aa5.91□□□□□ -1.46
USP54-212ENST00000480210 MUC4Q99102 2169 aa5.9□□□□□ -1.46
USP54-212ENST00000480210 IGHV3-16A0A0C4DH30 117 aa5.9□□□□□ -1.46
USP54-212ENST00000480210 PLAC8L1A1L4L8 177 aa5.9□□□□□ -1.46
USP54-212ENST00000480210 K7EN84 100 aa5.9□□□□□ -1.46
USP54-212ENST00000480210 M0R2P5 195 aa5.9□□□□□ -1.46
USP54-212ENST00000480210 SPINK4O60575 86 aa5.9□□□□□ -1.46
USP54-212ENST00000480210 IGLV2-8P01709 118 aa5.9□□□□□ -1.46
USP54-212ENST00000480210 MGST1P10620 155 aaKnown RBP5.9□□□□□ -1.46
USP54-212ENST00000480210 S100A4P26447 101 aaKnown RBP5.9□□□□□ -1.46
USP54-212ENST00000480210 ASIPP42127 132 aa5.9□□□□□ -1.46
USP54-212ENST00000480210 EMP1P54849 157 aa5.9□□□□□ -1.46
USP54-212ENST00000480210 DAD1P61803 113 aa5.9□□□□□ -1.46
USP54-212ENST00000480210 GAGE5Q13069 117 aa5.9□□□□□ -1.46
USP54-212ENST00000480210 GAGE6Q13070 117 aa5.9□□□□□ -1.46
USP54-212ENST00000480210 LINC00612Q8N6U2 182 aa5.9□□□□□ -1.46
USP54-212ENST00000480210 MUC7Q8TAX7 377 aa5.9□□□□□ -1.46
USP54-212ENST00000480210 RASL10AQ92737 203 aa5.9□□□□□ -1.46
USP54-212ENST00000480210 NOP10Q9NPE3 64 aaKnown RBP5.9□□□□□ -1.46
USP54-212ENST00000480210 KLK5Q9Y337 293 aaPredicted RBP5.9□□□□□ -1.46
USP54-212ENST00000480210 COL7A1Q02388 2944 aa5.9□□□□□ -1.47
USP54-212ENST00000480210 TRAV10A0A0B4J240 114 aa5.89□□□□□ -1.47
USP54-212ENST00000480210 IGKV3D-20A0A0C4DH25 116 aa5.89□□□□□ -1.47
USP54-212ENST00000480210 IGHV1-24A0A0C4DH33 117 aa5.89□□□□□ -1.47
USP54-212ENST00000480210 C19orf71A6NCJ1 209 aa5.89□□□□□ -1.47
USP54-212ENST00000480210 NUPR2A6NF83 97 aa5.89□□□□□ -1.47
USP54-212ENST00000480210 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.89□□□□□ -1.47
USP54-212ENST00000480210 H3BUT2 72 aa5.89□□□□□ -1.47
USP54-212ENST00000480210 DEFB4AO15263 64 aa5.89□□□□□ -1.47
USP54-212ENST00000480210 GNRH2O43555 120 aa5.89□□□□□ -1.47
USP54-212ENST00000480210 P01737 135 aa5.89□□□□□ -1.47
USP54-212ENST00000480210 SMAGPQ0VAQ4 97 aa5.89□□□□□ -1.47
USP54-212ENST00000480210 SLAQ13239 276 aa5.89□□□□□ -1.47
USP54-212ENST00000480210 C12orf74Q32Q52 190 aa5.89□□□□□ -1.47
USP54-212ENST00000480210 FAM19A2Q8N3H0 131 aa5.89□□□□□ -1.47
USP54-212ENST00000480210 ZNF479Q96JC4 524 aa5.89□□□□□ -1.47
USP54-212ENST00000480210 NACAE9PAV3 2078 aa5.89□□□□□ -1.47
USP54-212ENST00000480210 TENM3Q9P273 2699 aa5.88□□□□□ -1.47
USP54-212ENST00000480210 A0A1B0GXF2 115 aa5.88□□□□□ -1.47
USP54-212ENST00000480210 PRM2P04554 102 aa5.88□□□□□ -1.47
USP54-212ENST00000480210 ATP5G1P05496 136 aa5.88□□□□□ -1.47
USP54-212ENST00000480210 Q6ZQT7 251 aa5.88□□□□□ -1.47
USP54-212ENST00000480210 ATOH7Q8N100 152 aa5.88□□□□□ -1.47
USP54-212ENST00000480210 GATD1Q8NB37 220 aa5.88□□□□□ -1.47
USP54-212ENST00000480210 SYT8Q8NBV8 401 aa5.88□□□□□ -1.47
USP54-212ENST00000480210 C9orf85Q96MD7 179 aa5.88□□□□□ -1.47
USP54-212ENST00000480210 AP5S1Q9NUS5 200 aa5.88□□□□□ -1.47
USP54-212ENST00000480210 MDFICQ9P1T7 246 aa5.88□□□□□ -1.47
USP54-212ENST00000480210 C11orf21Q9P2W6 132 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms