RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 GAGE7O76087 117 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 DUSP14O95147 198 aaKnown RBP4.56□□□□□ -1.68
SF3B1-209ENST00000479532 NDUFB4O95168 129 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 LEPROTL1O95214 131 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 GAGE12FP0CL80 117 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 GAGE12GP0CL81 117 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 GAGE12IP0CL82 117 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 SMIM13P0DJ93 91 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 ARL14EPLP0DKL9 152 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 FGF6P10767 208 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 APOC4P55056 127 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 GAGE4Q13068 117 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 MRPL23Q16540 153 aaKnown RBP4.56□□□□□ -1.68
SF3B1-209ENST00000479532 ODF3L2Q3SX64 289 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 LYRM7Q5U5X0 104 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 ZFAND6Q6FIF0 208 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 APRG1Q8IVJ8 170 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 LYPD1Q8N2G4 141 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 OR10J6PQ8NGY7 276 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 MRPL53Q96EL3 112 aaKnown RBP4.56□□□□□ -1.68
SF3B1-209ENST00000479532 FAM167A-AS1Q96KT0 104 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 ANAPC13Q9BS18 74 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 NDFIP1Q9BT67 221 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 YTHDF2Q9Y5A9 579 aaKnown RBP4.56□□□□□ -1.68
SF3B1-209ENST00000479532 VWFP04275 2813 aa4.55□□□□□ -1.68
SF3B1-209ENST00000479532 NOTCH3Q9UM47 2321 aa4.55□□□□□ -1.68
SF3B1-209ENST00000479532 TRBV20OR9-2A0A075B6H5 130 aa4.55□□□□□ -1.68
SF3B1-209ENST00000479532 A0A087WX48 190 aa4.55□□□□□ -1.68
SF3B1-209ENST00000479532 A0A1B0GX51 115 aa4.55□□□□□ -1.68
SF3B1-209ENST00000479532 H3BTX0 84 aa4.55□□□□□ -1.68
SF3B1-209ENST00000479532 SPINK8P0C7L1 97 aa4.55□□□□□ -1.68
SF3B1-209ENST00000479532 GCHFRP30047 84 aa4.55□□□□□ -1.68
SF3B1-209ENST00000479532 LGALS9BQ3B8N2 356 aa4.55□□□□□ -1.68
SF3B1-209ENST00000479532 TMEM78Q5T7P6 136 aa4.55□□□□□ -1.68
SF3B1-209ENST00000479532 LGALS9CQ6DKI2 356 aa4.55□□□□□ -1.68
SF3B1-209ENST00000479532 MORN3Q6PF18 240 aaPredicted RBP4.55□□□□□ -1.68
SF3B1-209ENST00000479532 Q6ZUT4 128 aa4.55□□□□□ -1.68
SF3B1-209ENST00000479532 RNF182Q8N6D2 247 aa4.55□□□□□ -1.68
SF3B1-209ENST00000479532 PRSS3P2Q8NHM4 247 aa4.55□□□□□ -1.68
SF3B1-209ENST00000479532 OCC1Q8TAD7 63 aa4.55□□□□□ -1.68
SF3B1-209ENST00000479532 FXYD5Q96DB9 178 aa4.55□□□□□ -1.68
SF3B1-209ENST00000479532 LINC01600Q96MT4 127 aa4.55□□□□□ -1.68
SF3B1-209ENST00000479532 WFDC10AQ9H1F0 79 aa4.55□□□□□ -1.68
SF3B1-209ENST00000479532 MAP1LC3AQ9H492 121 aa4.55□□□□□ -1.68
SF3B1-209ENST00000479532 TRAV8-2A0A0B4J237 113 aa4.54□□□□□ -1.68
SF3B1-209ENST00000479532 A0A1B0GXF2 115 aa4.54□□□□□ -1.68
SF3B1-209ENST00000479532 KNCNA6PVL3 124 aa4.54□□□□□ -1.68
SF3B1-209ENST00000479532 FABP5P3A8MUU1 101 aa4.54□□□□□ -1.68
SF3B1-209ENST00000479532 F2Z2F3 143 aa4.54□□□□□ -1.68
SF3B1-209ENST00000479532 FRMD6-AS1P0C7T7 363 aa4.54□□□□□ -1.68
SF3B1-209ENST00000479532 RPL35AP18077 110 aaKnown RBP4.54□□□□□ -1.68
SF3B1-209ENST00000479532 NTF3P20783 257 aa4.54□□□□□ -1.68
SF3B1-209ENST00000479532 RPS28P62857 69 aaKnown RBP4.54□□□□□ -1.68
SF3B1-209ENST00000479532 Q6AWC8 147 aa4.54□□□□□ -1.68
SF3B1-209ENST00000479532 GATD1Q8NB37 220 aa4.54□□□□□ -1.68
SF3B1-209ENST00000479532 KIR2DL5BQ8NHK3 375 aa4.54□□□□□ -1.68
SF3B1-209ENST00000479532 NTN5Q8WTR8 489 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-209ENST00000479532 DNAJC30Q96LL9 226 aa4.54□□□□□ -1.68
SF3B1-209ENST00000479532 C17orf77Q96MU5 243 aa4.54□□□□□ -1.68
SF3B1-209ENST00000479532 GFRA4Q9GZZ7 299 aa4.54□□□□□ -1.68
SF3B1-209ENST00000479532 Q9H3A6 140 aa4.54□□□□□ -1.68
SF3B1-209ENST00000479532 OTORQ9NRC9 128 aa4.54□□□□□ -1.68
SF3B1-209ENST00000479532 SS18L2Q9UHA2 77 aa4.54□□□□□ -1.68
SF3B1-209ENST00000479532 A0A0J9YX75 114 aa4.53□□□□□ -1.68
SF3B1-209ENST00000479532 A0A1B0GWB2 263 aa4.53□□□□□ -1.68
SF3B1-209ENST00000479532 A0A1W2PRE2 83 aa4.53□□□□□ -1.68
SF3B1-209ENST00000479532 PGPA6NDG6 321 aa4.53□□□□□ -1.68
SF3B1-209ENST00000479532 FBLL1A6NHQ2 334 aaKnown RBP4.53□□□□□ -1.68
SF3B1-209ENST00000479532 H3BMM0 161 aa4.53□□□□□ -1.68
SF3B1-209ENST00000479532 K7EN84 100 aa4.53□□□□□ -1.68
SF3B1-209ENST00000479532 CA1P00915 261 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-209ENST00000479532 IGKV3-20P01619 116 aa4.53□□□□□ -1.68
SF3B1-209ENST00000479532 SLC25A5P05141 298 aaKnown RBP4.53□□□□□ -1.68
SF3B1-209ENST00000479532 KRTAP10-6P60371 365 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-209ENST00000479532 C10orf25Q5T742 122 aa4.53□□□□□ -1.68
SF3B1-209ENST00000479532 TRPT1Q86TN4 253 aaKnown RBP4.53□□□□□ -1.68
SF3B1-209ENST00000479532 EXOC3-AS1Q8N2X6 119 aa4.53□□□□□ -1.68
SF3B1-209ENST00000479532 OR8A1Q8NGG7 326 aa4.53□□□□□ -1.68
SF3B1-209ENST00000479532 PPDPFLQ8WWR9 84 aa4.53□□□□□ -1.68
SF3B1-209ENST00000479532 B9D2Q9BPU9 175 aa4.53□□□□□ -1.68
SF3B1-209ENST00000479532 PRO0461Q9UI25 63 aa4.53□□□□□ -1.68
SF3B1-209ENST00000479532 PKD1L1Q8TDX9 2849 aa4.53□□□□□ -1.68
SF3B1-209ENST00000479532 MGAM2Q2M2H8 2515 aa4.52□□□□□ -1.69
SF3B1-209ENST00000479532 RBAKDNA6NC62 111 aa4.52□□□□□ -1.69
SF3B1-209ENST00000479532 RBMY1BA6NDE4 496 aaKnown RBP4.52□□□□□ -1.69
SF3B1-209ENST00000479532 RBMY1EA6NEQ0 496 aaKnown RBP4.52□□□□□ -1.69
SF3B1-209ENST00000479532 F6UB75 175 aa4.52□□□□□ -1.69
SF3B1-209ENST00000479532 RBMY1DP0C7P1 496 aaKnown RBP4.52□□□□□ -1.69
SF3B1-209ENST00000479532 HLA-DMBP28068 263 aa4.52□□□□□ -1.69
SF3B1-209ENST00000479532 LEPP41159 167 aa4.52□□□□□ -1.69
SF3B1-209ENST00000479532 ATOH7Q8N100 152 aa4.52□□□□□ -1.69
SF3B1-209ENST00000479532 SMIM20Q8N5G0 67 aa4.52□□□□□ -1.69
SF3B1-209ENST00000479532 PHLDA1Q8WV24 401 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-209ENST00000479532 LINC00477Q96M19 166 aa4.52□□□□□ -1.69
SF3B1-209ENST00000479532 M0R3E3 92 aa4.51□□□□□ -1.69
SF3B1-209ENST00000479532 APOMO95445 188 aa4.51□□□□□ -1.69
SF3B1-209ENST00000479532 ATP5G1P05496 136 aa4.51□□□□□ -1.69
SF3B1-209ENST00000479532 ATP5G3P48201 142 aa4.51□□□□□ -1.69
SF3B1-209ENST00000479532 CAMPP49913 170 aa4.51□□□□□ -1.69
SF3B1-209ENST00000479532 HBBP68871 147 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms