RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 NEGR1Q7Z3B1 354 aa4.33□□□□□ -1.72
HOXB3-209ENST00000478644 SLC51BQ86UW2 128 aa4.33□□□□□ -1.72
HOXB3-209ENST00000478644 FAM213BQ8TBF2 198 aa4.33□□□□□ -1.72
HOXB3-209ENST00000478644 PCNPQ8WW12 178 aaKnown RBP4.33□□□□□ -1.72
HOXB3-209ENST00000478644 NDFIP1Q9BT67 221 aa4.33□□□□□ -1.72
HOXB3-209ENST00000478644 PSG8Q9UQ74 426 aa4.33□□□□□ -1.72
HOXB3-209ENST00000478644 HHLA3Q9XRX5 114 aa4.33□□□□□ -1.72
HOXB3-209ENST00000478644 KLF12Q9Y4X4 402 aa4.33□□□□□ -1.72
HOXB3-209ENST00000478644 V9GYY9 64 aa4.33□□□□□ -1.72
HOXB3-209ENST00000478644 DNAH17Q9UFH2 4485 aa4.32□□□□□ -1.72
HOXB3-209ENST00000478644 C9JCJ5 164 aa4.32□□□□□ -1.72
HOXB3-209ENST00000478644 F6UZH7 168 aa4.32□□□□□ -1.72
HOXB3-209ENST00000478644 PEX7O00628 323 aa4.32□□□□□ -1.72
HOXB3-209ENST00000478644 PFN1P07737 140 aaKnown RBP4.32□□□□□ -1.72
HOXB3-209ENST00000478644 EVI2AP22794 236 aa4.32□□□□□ -1.72
HOXB3-209ENST00000478644 SULT1A2P50226 295 aa4.32□□□□□ -1.72
HOXB3-209ENST00000478644 ERVFC1-1P60608 527 aa4.32□□□□□ -1.72
HOXB3-209ENST00000478644 SMUG1Q53HV7 270 aa4.32□□□□□ -1.72
HOXB3-209ENST00000478644 C9orf62Q8N4C0 152 aa4.32□□□□□ -1.72
HOXB3-209ENST00000478644 RASL10AQ92737 203 aa4.32□□□□□ -1.72
HOXB3-209ENST00000478644 LINC00479Q96M42 142 aa4.32□□□□□ -1.72
HOXB3-209ENST00000478644 ZFP30Q9Y2G7 519 aa4.32□□□□□ -1.72
HOXB3-209ENST00000478644 LY96Q9Y6Y9 160 aa4.32□□□□□ -1.72
HOXB3-209ENST00000478644 A0A096LPF7 62 aa4.31□□□□□ -1.72
HOXB3-209ENST00000478644 TRGV4A0A0C4DH28 118 aa4.31□□□□□ -1.72
HOXB3-209ENST00000478644 IGHV3-16A0A0C4DH30 117 aa4.31□□□□□ -1.72
HOXB3-209ENST00000478644 A0A0J9YY99 117 aa4.31□□□□□ -1.72
HOXB3-209ENST00000478644 A0A1B0GVG6 124 aa4.31□□□□□ -1.72
HOXB3-209ENST00000478644 SRIP30626 198 aa4.31□□□□□ -1.72
HOXB3-209ENST00000478644 ZNF80P51504 273 aaPredicted RBP4.31□□□□□ -1.72
HOXB3-209ENST00000478644 ZFP69Q49AA0 526 aa4.31□□□□□ -1.72
HOXB3-209ENST00000478644 MUC21Q5SSG8 566 aa4.31□□□□□ -1.72
HOXB3-209ENST00000478644 Q6ZTI0 123 aa4.31□□□□□ -1.72
HOXB3-209ENST00000478644 PRNTQ86SH4 94 aa4.31□□□□□ -1.72
HOXB3-209ENST00000478644 MTURNQ8N3F0 131 aa4.31□□□□□ -1.72
HOXB3-209ENST00000478644 FMC1Q96HJ9 113 aa4.31□□□□□ -1.72
HOXB3-209ENST00000478644 MDFICQ9P1T7 246 aa4.31□□□□□ -1.72
HOXB3-209ENST00000478644 PKD1P98161 4303 aa4.3□□□□□ -1.72
HOXB3-209ENST00000478644 TRAV4A0A0B4J268 109 aa4.3□□□□□ -1.72
HOXB3-209ENST00000478644 FABP5P3A8MUU1 101 aa4.3□□□□□ -1.72
HOXB3-209ENST00000478644 M0R2P5 195 aa4.3□□□□□ -1.72
HOXB3-209ENST00000478644 GNRH2O43555 120 aa4.3□□□□□ -1.72
HOXB3-209ENST00000478644 GCGP01275 180 aa4.3□□□□□ -1.72
HOXB3-209ENST00000478644 LTAP01374 205 aa4.3□□□□□ -1.72
HOXB3-209ENST00000478644 CRYBA4P53673 196 aa4.3□□□□□ -1.72
HOXB3-209ENST00000478644 CCL20P78556 96 aa4.3□□□□□ -1.72
HOXB3-209ENST00000478644 TMEM183BQ1AE95 376 aa4.3□□□□□ -1.72
HOXB3-209ENST00000478644 LYPD5Q6UWN5 251 aa4.3□□□□□ -1.72
HOXB3-209ENST00000478644 SPATA12Q7Z6I5 190 aa4.3□□□□□ -1.72
HOXB3-209ENST00000478644 Q86TA4 180 aa4.3□□□□□ -1.72
HOXB3-209ENST00000478644 TMEM183AQ8IXX5 376 aa4.3□□□□□ -1.72
HOXB3-209ENST00000478644 BAALCQ8WXS3 180 aa4.3□□□□□ -1.72
HOXB3-209ENST00000478644 PTH2Q96A98 100 aa4.3□□□□□ -1.72
HOXB3-209ENST00000478644 VSIG2Q96IQ7 327 aa4.3□□□□□ -1.72
HOXB3-209ENST00000478644 SDF2L1Q9HCN8 221 aa4.3□□□□□ -1.72
HOXB3-209ENST00000478644 MANBALQ9NQG1 85 aa4.3□□□□□ -1.72
HOXB3-209ENST00000478644 DNAH2Q9P225 4427 aa4.3□□□□□ -1.72
HOXB3-209ENST00000478644 NACAE9PAV3 2078 aa4.3□□□□□ -1.72
HOXB3-209ENST00000478644 TRAV8-6A0A0B4J262 113 aa4.29□□□□□ -1.72
HOXB3-209ENST00000478644 A0A1B0GV50 99 aa4.29□□□□□ -1.72
HOXB3-209ENST00000478644 NXPH4O95158 308 aa4.29□□□□□ -1.72
HOXB3-209ENST00000478644 TYMSP04818 313 aa4.29□□□□□ -1.72
HOXB3-209ENST00000478644 AKR1C3P42330 323 aa4.29□□□□□ -1.72
HOXB3-209ENST00000478644 CRIP1P50238 77 aa4.29□□□□□ -1.72
HOXB3-209ENST00000478644 UBE2G1P62253 170 aa4.29□□□□□ -1.72
HOXB3-209ENST00000478644 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
HOXB3-209ENST00000478644 BOD1L2Q8IYS8 172 aa4.29□□□□□ -1.72
HOXB3-209ENST00000478644 C11orf52Q96A22 123 aa4.29□□□□□ -1.72
HOXB3-209ENST00000478644 PPDPFQ9H3Y8 114 aa4.29□□□□□ -1.72
HOXB3-209ENST00000478644 MRPL16Q9NX20 251 aaKnown RBP4.29□□□□□ -1.72
HOXB3-209ENST00000478644 FAT2Q9NYQ8 4349 aa4.29□□□□□ -1.72
HOXB3-209ENST00000478644 KIAA1109Q2LD37 5005 aa4.29□□□□□ -1.72
HOXB3-209ENST00000478644 PCLOQ9Y6V0 5065 aa4.29□□□□□ -1.72
HOXB3-209ENST00000478644 IGKV3D-20A0A0C4DH25 116 aa4.28□□□□□ -1.72
HOXB3-209ENST00000478644 TRBV6-4A0A1B0GX49 114 aa4.28□□□□□ -1.72
HOXB3-209ENST00000478644 K7EQD1 137 aa4.28□□□□□ -1.72
HOXB3-209ENST00000478644 PPP1R2P9O14990 202 aa4.28□□□□□ -1.72
HOXB3-209ENST00000478644 DNAH10OSP0CZ25 163 aa4.28□□□□□ -1.72
HOXB3-209ENST00000478644 HNRNPA3P51991 378 aaKnown RBP4.28□□□□□ -1.72
HOXB3-209ENST00000478644 CEBPGP53567 150 aa4.28□□□□□ -1.72
HOXB3-209ENST00000478644 LINC00315P59091 139 aa4.28□□□□□ -1.72
HOXB3-209ENST00000478644 DNLZQ5SXM8 178 aa4.28□□□□□ -1.72
HOXB3-209ENST00000478644 FAM162BQ5T6X4 162 aa4.28□□□□□ -1.72
HOXB3-209ENST00000478644 BAGE2Q86Y30 109 aa4.28□□□□□ -1.72
HOXB3-209ENST00000478644 ZC2HC1AQ96GY0 325 aa4.28□□□□□ -1.72
HOXB3-209ENST00000478644 C9orf85Q96MD7 179 aa4.28□□□□□ -1.72
HOXB3-209ENST00000478644 PRADC1Q9BSG0 188 aa4.28□□□□□ -1.72
HOXB3-209ENST00000478644 GNG13Q9P2W3 67 aa4.28□□□□□ -1.72
HOXB3-209ENST00000478644 FAM231BA6NCW3 169 aa4.27□□□□□ -1.73
HOXB3-209ENST00000478644 KRBOX1C9JBD0 128 aa4.27□□□□□ -1.73
HOXB3-209ENST00000478644 PDE6DO43924 150 aa4.27□□□□□ -1.73
HOXB3-209ENST00000478644 SH2D1AO60880 128 aa4.27□□□□□ -1.73
HOXB3-209ENST00000478644 IFNA1P01562 189 aa4.27□□□□□ -1.73
HOXB3-209ENST00000478644 RNASE3P12724 160 aaKnown RBP4.27□□□□□ -1.73
HOXB3-209ENST00000478644 MEF2BQ02080 365 aaPredicted RBP4.27□□□□□ -1.73
HOXB3-209ENST00000478644 ZNF876PQ49A33 203 aa4.27□□□□□ -1.73
HOXB3-209ENST00000478644 ZFP2Q6ZN57 461 aa4.27□□□□□ -1.73
HOXB3-209ENST00000478644 OR10G8Q8NGN5 311 aa4.27□□□□□ -1.73
HOXB3-209ENST00000478644 SCRT2Q9NQ03 307 aa4.27□□□□□ -1.73
HOXB3-209ENST00000478644 PKHD1P08F94 4074 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms