RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 ATRAIDQ6UW56 229 aa15.54■□□□□ 0.08
C9orf3-215ENST00000478473 URGCP-MRPS24S4R325 110 aa15.54■□□□□ 0.08
C9orf3-215ENST00000478473 RBFOX3A6NFN3 312 aa15.53■□□□□ 0.08
C9orf3-215ENST00000478473 ELOBQ15370 118 aa15.53■□□□□ 0.08
C9orf3-215ENST00000478473 WDR73Q6P4I2 378 aa15.53■□□□□ 0.08
C9orf3-215ENST00000478473 TMEM250H0YL14 139 aa15.52■□□□□ 0.08
C9orf3-215ENST00000478473 SMIM17P0DL12 118 aa15.52■□□□□ 0.08
C9orf3-215ENST00000478473 CNFNQ9BYD5 112 aa15.52■□□□□ 0.08
C9orf3-215ENST00000478473 hCG_2014768A0A024R1R8 64 aa15.51■□□□□ 0.07
C9orf3-215ENST00000478473 IGLV5-52A0A0A0MRZ9 124 aa15.51■□□□□ 0.07
C9orf3-215ENST00000478473 F5H697 171 aa15.51■□□□□ 0.07
C9orf3-215ENST00000478473 M0QY20 66 aa15.51■□□□□ 0.07
C9orf3-215ENST00000478473 NDUFS6O75380 124 aaKnown RBP15.51■□□□□ 0.07
C9orf3-215ENST00000478473 TMEM97Q5BJF2 176 aa15.51■□□□□ 0.07
C9orf3-215ENST00000478473 ALKAL2Q6UX46 152 aa15.51■□□□□ 0.07
C9orf3-215ENST00000478473 NUDT10Q8NFP7 164 aa15.51■□□□□ 0.07
C9orf3-215ENST00000478473 NUDT11Q96G61 164 aa15.51■□□□□ 0.07
C9orf3-215ENST00000478473 A0A087WX48 190 aa15.5■□□□□ 0.07
C9orf3-215ENST00000478473 CTRLP40313 264 aa15.5■□□□□ 0.07
C9orf3-215ENST00000478473 WFDC2Q14508 124 aa15.5■□□□□ 0.07
C9orf3-215ENST00000478473 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.5■□□□□ 0.07
C9orf3-215ENST00000478473 OCC1Q8TAD7 63 aa15.5■□□□□ 0.07
C9orf3-215ENST00000478473 RMI2Q96E14 147 aa15.5■□□□□ 0.07
C9orf3-215ENST00000478473 DNAJC30Q96LL9 226 aa15.5■□□□□ 0.07
C9orf3-215ENST00000478473 NTM-AS1Q6ZSK4 140 aa15.49■□□□□ 0.07
C9orf3-215ENST00000478473 TMEM70Q9BUB7 260 aa15.49■□□□□ 0.07
C9orf3-215ENST00000478473 KLK12Q9UKR0 248 aa15.49■□□□□ 0.07
C9orf3-215ENST00000478473 K7EN84 100 aa15.48■□□□□ 0.07
C9orf3-215ENST00000478473 SSTP61278 116 aa15.48■□□□□ 0.07
C9orf3-215ENST00000478473 PKIAP61925 76 aa15.48■□□□□ 0.07
C9orf3-215ENST00000478473 LYZL1Q6UWQ5 148 aa15.48■□□□□ 0.07
C9orf3-215ENST00000478473 H7C1H1 209 aa15.47■□□□□ 0.07
C9orf3-215ENST00000478473 TRGC1P0CF51 173 aa15.47■□□□□ 0.07
C9orf3-215ENST00000478473 Q0VG73 95 aa15.47■□□□□ 0.07
C9orf3-215ENST00000478473 TPPP3Q9BW30 176 aa15.47■□□□□ 0.07
C9orf3-215ENST00000478473 NTF3P20783 257 aa15.46■□□□□ 0.07
C9orf3-215ENST00000478473 SUMO4Q6EEV6 95 aa15.46■□□□□ 0.07
C9orf3-215ENST00000478473 KCNIP4Q6PIL6 250 aa15.46■□□□□ 0.07
C9orf3-215ENST00000478473 RPP21Q9H633 154 aaKnown RBP15.46■□□□□ 0.07
C9orf3-215ENST00000478473 FAT1Q14517 4588 aa15.46■□□□□ 0.07
C9orf3-215ENST00000478473 UBE2WQ96B02 151 aa15.45■□□□□ 0.06
C9orf3-215ENST00000478473 IQCJQ1A5X6 159 aa15.44■□□□□ 0.06
C9orf3-215ENST00000478473 FAM231DQ6ZW35 169 aa15.44■□□□□ 0.06
C9orf3-215ENST00000478473 DPH3P1Q9H4G8 78 aa15.44■□□□□ 0.06
C9orf3-215ENST00000478473 MPV17L2Q567V2 206 aa15.43■□□□□ 0.06
C9orf3-215ENST00000478473 ENHOQ6UWT2 76 aa15.43■□□□□ 0.06
C9orf3-215ENST00000478473 RNASE7Q9H1E1 156 aaKnown RBP15.43■□□□□ 0.06
C9orf3-215ENST00000478473 TMEM262E9PQX1 116 aa15.42■□□□□ 0.06
C9orf3-215ENST00000478473 MGPP08493 103 aa15.42■□□□□ 0.06
C9orf3-215ENST00000478473 RASL11AQ6T310 242 aa15.42■□□□□ 0.06
C9orf3-215ENST00000478473 FRZBQ92765 325 aa15.42■□□□□ 0.06
C9orf3-215ENST00000478473 IGKV2D-24A0A075B6R9 120 aa15.41■□□□□ 0.06
C9orf3-215ENST00000478473 Q8N976 141 aa15.41■□□□□ 0.06
C9orf3-215ENST00000478473 GTSF1Q8WW33 167 aa15.41■□□□□ 0.06
C9orf3-215ENST00000478473 BAALCQ8WXS3 180 aa15.41■□□□□ 0.06
C9orf3-215ENST00000478473 CHCHD5Q9BSY4 110 aa15.41■□□□□ 0.06
C9orf3-215ENST00000478473 PRR34Q9NV39 138 aa15.41■□□□□ 0.06
C9orf3-215ENST00000478473 TRBV25-1A0A075B6N4 114 aa15.4■□□□□ 0.06
C9orf3-215ENST00000478473 A0A1B0GVG6 124 aa15.4■□□□□ 0.06
C9orf3-215ENST00000478473 EPM2AB3EWF7 344 aa15.4■□□□□ 0.06
C9orf3-215ENST00000478473 Q6ZSA8 131 aa15.4■□□□□ 0.06
C9orf3-215ENST00000478473 PGLYRP4Q96LB8 373 aa15.4■□□□□ 0.06
C9orf3-215ENST00000478473 NIT2Q9NQR4 276 aa15.4■□□□□ 0.06
C9orf3-215ENST00000478473 DNAH8Q96JB1 4490 aa15.4■□□□□ 0.06
C9orf3-215ENST00000478473 NKX2-5P52952 324 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-215ENST00000478473 FOXA3P55318 350 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-215ENST00000478473 CT83Q5H943 113 aa15.39■□□□□ 0.05
C9orf3-215ENST00000478473 IGHV1-24A0A0C4DH33 117 aa15.38■□□□□ 0.05
C9orf3-215ENST00000478473 LECT2O14960 151 aa15.38■□□□□ 0.05
C9orf3-215ENST00000478473 RBX1P62877 108 aa15.38■□□□□ 0.05
C9orf3-215ENST00000478473 MIAQ16674 131 aa15.38■□□□□ 0.05
C9orf3-215ENST00000478473 C15orf54Q8N8G6 183 aa15.38■□□□□ 0.05
C9orf3-215ENST00000478473 FAM210AQ96ND0 272 aa15.38■□□□□ 0.05
C9orf3-215ENST00000478473 C1orf43Q9BWL3 253 aa15.37■□□□□ 0.05
C9orf3-215ENST00000478473 FAM30AQ9NZY2 134 aa15.37■□□□□ 0.05
C9orf3-215ENST00000478473 ANGP03950 147 aaKnown RBP15.36■□□□□ 0.05
C9orf3-215ENST00000478473 TWIST1Q15672 202 aa15.36■□□□□ 0.05
C9orf3-215ENST00000478473 A0A1B0GUV1 79 aa15.35■□□□□ 0.05
C9orf3-215ENST00000478473 A8MWL6 223 aa15.35■□□□□ 0.05
C9orf3-215ENST00000478473 GATCO43716 136 aaKnown RBP15.35■□□□□ 0.05
C9orf3-215ENST00000478473 CRPP02741 224 aa15.35■□□□□ 0.05
C9orf3-215ENST00000478473 KRTAP26-1Q6PEX3 210 aa15.34■□□□□ 0.05
C9orf3-215ENST00000478473 LINC01551Q86U37 167 aa15.34■□□□□ 0.05
C9orf3-215ENST00000478473 EIF5A2Q9GZV4 153 aaKnown RBP15.34■□□□□ 0.05
C9orf3-215ENST00000478473 SRP19P09132 144 aaKnown RBP15.33■□□□□ 0.04
C9orf3-215ENST00000478473 GAGE6Q13070 117 aa15.33■□□□□ 0.04
C9orf3-215ENST00000478473 Q5VSD8 79 aa15.33■□□□□ 0.04
C9orf3-215ENST00000478473 GATD1Q8NB37 220 aa15.33■□□□□ 0.04
C9orf3-215ENST00000478473 SMIM7Q9BQ49 75 aa15.33■□□□□ 0.04
C9orf3-215ENST00000478473 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.32■□□□□ 0.04
C9orf3-215ENST00000478473 C14orf177Q52M58 125 aa15.32■□□□□ 0.04
C9orf3-215ENST00000478473 FAM231BA6NCW3 169 aa15.31■□□□□ 0.04
C9orf3-215ENST00000478473 TMEM243Q9BU79 118 aa15.31■□□□□ 0.04
C9orf3-215ENST00000478473 GFRA4Q9GZZ7 299 aa15.31■□□□□ 0.04
C9orf3-215ENST00000478473 OSTCQ9NRP0 149 aa15.31■□□□□ 0.04
C9orf3-215ENST00000478473 TEX261Q6UWH6 196 aa15.3■□□□□ 0.04
C9orf3-215ENST00000478473 LINC00269Q8N2A0 174 aa15.3■□□□□ 0.04
C9orf3-215ENST00000478473 C20orf203Q8NBC4 194 aa15.3■□□□□ 0.04
C9orf3-215ENST00000478473 SMIM15Q7Z3B0 74 aa15.29■□□□□ 0.04
C9orf3-215ENST00000478473 ZNF727A8MUV8 499 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms