RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 Q9UF83 564 aa7.35□□□□□ -1.23
CMC1-209ENST00000477739 ITPR3Q14573 2671 aa7.35□□□□□ -1.23
CMC1-209ENST00000477739 FAM223BA6NKX1 122 aa7.35□□□□□ -1.23
CMC1-209ENST00000477739 ID1P41134 155 aa7.35□□□□□ -1.23
CMC1-209ENST00000477739 FAM223AQ8IWN6 122 aa7.35□□□□□ -1.23
CMC1-209ENST00000477739 Q8N1Y9 231 aa7.35□□□□□ -1.23
CMC1-209ENST00000477739 MSMBP08118 114 aa7.34□□□□□ -1.23
CMC1-209ENST00000477739 HIST2H2BCQ6DN03 193 aa7.34□□□□□ -1.23
CMC1-209ENST00000477739 DLX4Q92988 240 aaPredicted RBP7.34□□□□□ -1.23
CMC1-209ENST00000477739 DAZ1Q9NQZ3 744 aaKnown RBP7.34□□□□□ -1.23
CMC1-209ENST00000477739 XCL2Q9UBD3 114 aa7.34□□□□□ -1.23
CMC1-209ENST00000477739 HELZ2Q9BYK8 2649 aaKnown RBP7.34□□□□□ -1.23
CMC1-209ENST00000477739 TRAV13-1A0A0B4J241 112 aa7.34□□□□□ -1.24
CMC1-209ENST00000477739 A4D1N5 150 aa7.34□□□□□ -1.24
CMC1-209ENST00000477739 MT-ATP8P03928 68 aa7.34□□□□□ -1.24
CMC1-209ENST00000477739 SNRPD3P62318 126 aaKnown RBP7.34□□□□□ -1.24
CMC1-209ENST00000477739 MRAP2Q96G30 205 aa7.34□□□□□ -1.24
CMC1-209ENST00000477739 AVPP01185 164 aa7.33□□□□□ -1.24
CMC1-209ENST00000477739 C18orf65Q6ZTR6 163 aa7.33□□□□□ -1.24
CMC1-209ENST00000477739 LINC01587Q99440 93 aa7.33□□□□□ -1.24
CMC1-209ENST00000477739 TSPEAR-AS2P59090 65 aa7.33□□□□□ -1.24
CMC1-209ENST00000477739 C10orf105Q8TEF2 133 aa7.33□□□□□ -1.24
CMC1-209ENST00000477739 SPANXB1Q9NS25 103 aaPredicted RBP7.33□□□□□ -1.24
CMC1-209ENST00000477739 SMPXQ9UHP9 88 aa7.33□□□□□ -1.24
CMC1-209ENST00000477739 RNASE3P12724 160 aaKnown RBP7.32□□□□□ -1.24
CMC1-209ENST00000477739 DYNLRB2Q8TF09 96 aa7.32□□□□□ -1.24
CMC1-209ENST00000477739 CLUHP3Q96NS8 147 aa7.32□□□□□ -1.24
CMC1-209ENST00000477739 TNFRSF18Q9Y5U5 241 aa7.32□□□□□ -1.24
CMC1-209ENST00000477739 J3QQQ9 107 aa7.32□□□□□ -1.24
CMC1-209ENST00000477739 OVOL1O14753 267 aa7.32□□□□□ -1.24
CMC1-209ENST00000477739 GEMIN7Q9H840 131 aaKnown RBP7.32□□□□□ -1.24
CMC1-209ENST00000477739 RNF223E7ERA6 249 aa7.32□□□□□ -1.24
CMC1-209ENST00000477739 TSPAN13O95857 204 aa7.32□□□□□ -1.24
CMC1-209ENST00000477739 SLURP1P55000 103 aa7.32□□□□□ -1.24
CMC1-209ENST00000477739 DEFB112Q30KQ8 113 aa7.32□□□□□ -1.24
CMC1-209ENST00000477739 F8P00451 2351 aa7.32□□□□□ -1.24
CMC1-209ENST00000477739 A8MWV9 139 aa7.31□□□□□ -1.24
CMC1-209ENST00000477739 B4DSR2 109 aa7.31□□□□□ -1.24
CMC1-209ENST00000477739 TCL1BO95988 128 aa7.31□□□□□ -1.24
CMC1-209ENST00000477739 CRIP2P52943 208 aaPredicted RBP7.31□□□□□ -1.24
CMC1-209ENST00000477739 PMVKQ15126 192 aa7.31□□□□□ -1.24
CMC1-209ENST00000477739 ZNF575Q86XF7 245 aa7.31□□□□□ -1.24
CMC1-209ENST00000477739 USMG5Q96IX5 58 aa7.31□□□□□ -1.24
CMC1-209ENST00000477739 E9PLD3 99 aa7.31□□□□□ -1.24
CMC1-209ENST00000477739 NDUFA4O00483 81 aa7.31□□□□□ -1.24
CMC1-209ENST00000477739 VCYO14598 125 aa7.31□□□□□ -1.24
CMC1-209ENST00000477739 SIVA1O15304 175 aa7.31□□□□□ -1.24
CMC1-209ENST00000477739 RNASE1P07998 156 aaKnown RBP7.31□□□□□ -1.24
CMC1-209ENST00000477739 NTN5Q8WTR8 489 aaPredicted RBP7.31□□□□□ -1.24
CMC1-209ENST00000477739 C9orf47Q6ZRZ4 202 aa7.3□□□□□ -1.24
CMC1-209ENST00000477739 MUSTN1Q8IVN3 82 aa7.3□□□□□ -1.24
CMC1-209ENST00000477739 ERG28Q9UKR5 140 aa7.3□□□□□ -1.24
CMC1-209ENST00000477739 TRAV26-1A0A087WT03 109 aa7.3□□□□□ -1.24
CMC1-209ENST00000477739 MEIG1Q5JSS6 88 aa7.3□□□□□ -1.24
CMC1-209ENST00000477739 IGLV2-18A0A075B6J9 118 aa7.3□□□□□ -1.24
CMC1-209ENST00000477739 GPHB5Q86YW7 130 aa7.3□□□□□ -1.24
CMC1-209ENST00000477739 ZNRF2Q8NHG8 242 aa7.3□□□□□ -1.24
CMC1-209ENST00000477739 PIFOQ8TCI5 191 aa7.3□□□□□ -1.24
CMC1-209ENST00000477739 PRSS47A8MTI9 375 aa7.29□□□□□ -1.24
CMC1-209ENST00000477739 F8W1H4 67 aa7.29□□□□□ -1.24
CMC1-209ENST00000477739 NEXN-AS1Q8NBZ9 246 aa7.29□□□□□ -1.24
CMC1-209ENST00000477739 CLEC2BQ92478 149 aa7.29□□□□□ -1.24
CMC1-209ENST00000477739 TCTEX1D4Q5JR98 221 aa7.29□□□□□ -1.24
CMC1-209ENST00000477739 ANKRD29Q8N6D5 301 aa7.29□□□□□ -1.24
CMC1-209ENST00000477739 TOMM6Q96B49 74 aa7.29□□□□□ -1.24
CMC1-209ENST00000477739 TEP1Q99973 2627 aaKnown RBP7.29□□□□□ -1.24
CMC1-209ENST00000477739 NDUFA7O95182 113 aa7.29□□□□□ -1.24
CMC1-209ENST00000477739 IGHG2P01859 326 aa7.29□□□□□ -1.24
CMC1-209ENST00000477739 MORN3Q6PF18 240 aaPredicted RBP7.29□□□□□ -1.24
CMC1-209ENST00000477739 NFE4Q86UQ8 179 aa7.28□□□□□ -1.24
CMC1-209ENST00000477739 UBR5O95071 2799 aaPredicted RBP7.28□□□□□ -1.24
CMC1-209ENST00000477739 TTC32Q5I0X7 151 aa7.28□□□□□ -1.24
CMC1-209ENST00000477739 ANAPC13Q9BS18 74 aa7.28□□□□□ -1.24
CMC1-209ENST00000477739 TM2D2Q9BX73 214 aa7.28□□□□□ -1.24
CMC1-209ENST00000477739 SS18L2Q9UHA2 77 aa7.28□□□□□ -1.24
CMC1-209ENST00000477739 ATRQ13535 2644 aa7.28□□□□□ -1.24
CMC1-209ENST00000477739 IGHV4OR15-8A0A075B7B6 117 aa7.28□□□□□ -1.24
CMC1-209ENST00000477739 A0A087WW49 117 aa7.28□□□□□ -1.24
CMC1-209ENST00000477739 TRGV1A0A0A0MS02 117 aa7.28□□□□□ -1.24
CMC1-209ENST00000477739 COX6B1P14854 86 aa7.28□□□□□ -1.24
CMC1-209ENST00000477739 MRPL53Q96EL3 112 aaKnown RBP7.28□□□□□ -1.24
CMC1-209ENST00000477739 HOXD3P31249 432 aaPredicted RBP7.27□□□□□ -1.25
CMC1-209ENST00000477739 COX8CQ7Z4L0 72 aa7.27□□□□□ -1.25
CMC1-209ENST00000477739 PRO1854Q9UHT4 67 aa7.27□□□□□ -1.25
CMC1-209ENST00000477739 A0A096LPF7 62 aa7.27□□□□□ -1.25
CMC1-209ENST00000477739 A6NDX4 124 aa7.27□□□□□ -1.25
CMC1-209ENST00000477739 SLC25A20O43772 301 aa7.27□□□□□ -1.25
CMC1-209ENST00000477739 FOXI1Q12951 378 aa7.27□□□□□ -1.25
CMC1-209ENST00000477739 TIMM21Q9BVV7 248 aa7.27□□□□□ -1.25
CMC1-209ENST00000477739 TRBV7-3A0A075B6L6 115 aa7.27□□□□□ -1.25
CMC1-209ENST00000477739 TEX49A0A1B0GTD5 131 aa7.27□□□□□ -1.25
CMC1-209ENST00000477739 RPL35AP18077 110 aaKnown RBP7.27□□□□□ -1.25
CMC1-209ENST00000477739 ATP6V0BQ99437 205 aa7.27□□□□□ -1.25
CMC1-209ENST00000477739 IGHV1OR15-1A0A075B7D0 117 aa7.26□□□□□ -1.25
CMC1-209ENST00000477739 CFC1BP0CG36 223 aa7.26□□□□□ -1.25
CMC1-209ENST00000477739 CFC1P0CG37 223 aa7.26□□□□□ -1.25
CMC1-209ENST00000477739 A0A0J9YY99 117 aa7.26□□□□□ -1.25
CMC1-209ENST00000477739 TSHBP01222 138 aa7.26□□□□□ -1.25
CMC1-209ENST00000477739 SRSF2Q01130 221 aaKnown RBP7.26□□□□□ -1.25
CMC1-209ENST00000477739 NDUFA11Q86Y39 141 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms