RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 GATA1P15976 413 aaPredicted RBP5.79□□□□□ -1.48
VMA21-203ENST00000477649 FXYD7P58549 80 aa5.79□□□□□ -1.48
VMA21-203ENST00000477649 ZNF56Q15929 161 aa5.79□□□□□ -1.48
VMA21-203ENST00000477649 LCE4AQ5TA78 99 aa5.79□□□□□ -1.48
VMA21-203ENST00000477649 C11orf72Q8NBR9 251 aa5.79□□□□□ -1.48
VMA21-203ENST00000477649 TMEM263Q8WUH6 116 aaKnown RBP5.79□□□□□ -1.48
VMA21-203ENST00000477649 TOMM6Q96B49 74 aa5.79□□□□□ -1.48
VMA21-203ENST00000477649 C16orf74Q96GX8 76 aa5.79□□□□□ -1.48
VMA21-203ENST00000477649 CSTL1Q9H114 145 aa5.79□□□□□ -1.48
VMA21-203ENST00000477649 A0A087WWL8 130 aa5.78□□□□□ -1.48
VMA21-203ENST00000477649 GAS8-AS1O95177 125 aa5.78□□□□□ -1.48
VMA21-203ENST00000477649 PRSS1P07477 247 aa5.78□□□□□ -1.48
VMA21-203ENST00000477649 NPSP0C0P6 89 aa5.78□□□□□ -1.48
VMA21-203ENST00000477649 IGLC3P0DOY3 106 aa5.78□□□□□ -1.48
VMA21-203ENST00000477649 KRTAP10-3P60369 221 aa5.78□□□□□ -1.48
VMA21-203ENST00000477649 DAZ2Q13117 558 aaKnown RBP5.78□□□□□ -1.48
VMA21-203ENST00000477649 ZNF124Q15973 351 aa5.78□□□□□ -1.48
VMA21-203ENST00000477649 Q6ZN92 141 aa5.78□□□□□ -1.48
VMA21-203ENST00000477649 LINC00173Q6ZV60 143 aa5.78□□□□□ -1.48
VMA21-203ENST00000477649 ERASQ7Z444 233 aa5.78□□□□□ -1.48
VMA21-203ENST00000477649 C1orf158Q8N1D5 194 aa5.78□□□□□ -1.48
VMA21-203ENST00000477649 WFDC9Q8NEX5 89 aa5.78□□□□□ -1.48
VMA21-203ENST00000477649 IL17DQ8TAD2 202 aa5.78□□□□□ -1.48
VMA21-203ENST00000477649 TMEM141Q96I45 108 aa5.78□□□□□ -1.48
VMA21-203ENST00000477649 XCL2Q9UBD3 114 aa5.78□□□□□ -1.48
VMA21-203ENST00000477649 ZMAT5Q9UDW3 170 aaKnown RBP5.78□□□□□ -1.48
VMA21-203ENST00000477649 CYSLTR1Q9Y271 337 aa5.78□□□□□ -1.48
VMA21-203ENST00000477649 ACANP16112 2415 aa5.78□□□□□ -1.48
VMA21-203ENST00000477649 TRBV10-1A0A0K0K1A3 114 aa5.77□□□□□ -1.49
VMA21-203ENST00000477649 SDHAF1A6NFY7 115 aa5.77□□□□□ -1.49
VMA21-203ENST00000477649 SMIM9A6NGZ8 99 aa5.77□□□□□ -1.49
VMA21-203ENST00000477649 I3L3M4 83 aa5.77□□□□□ -1.49
VMA21-203ENST00000477649 RS1O15537 224 aa5.77□□□□□ -1.49
VMA21-203ENST00000477649 IGHV3-53P01767 116 aa5.77□□□□□ -1.49
VMA21-203ENST00000477649 IGLL1P15814 213 aa5.77□□□□□ -1.49
VMA21-203ENST00000477649 PLNP26678 52 aa5.77□□□□□ -1.49
VMA21-203ENST00000477649 PAPPA-AS1Q5QFB9 102 aa5.77□□□□□ -1.49
VMA21-203ENST00000477649 FAM74A4Q5TZK3 123 aa5.77□□□□□ -1.49
VMA21-203ENST00000477649 UFSP1Q6NVU6 142 aa5.77□□□□□ -1.49
VMA21-203ENST00000477649 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.77□□□□□ -1.49
VMA21-203ENST00000477649 KIR2DL5BQ8NHK3 375 aa5.77□□□□□ -1.49
VMA21-203ENST00000477649 RNASE8Q8TDE3 154 aaKnown RBP5.77□□□□□ -1.49
VMA21-203ENST00000477649 RPL39LQ96EH5 51 aaKnown RBP5.77□□□□□ -1.49
VMA21-203ENST00000477649 C14orf144Q96I85 54 aa5.77□□□□□ -1.49
VMA21-203ENST00000477649 SCGB3A1Q96QR1 104 aa5.77□□□□□ -1.49
VMA21-203ENST00000477649 TIMM17AQ99595 171 aa5.77□□□□□ -1.49
VMA21-203ENST00000477649 ZMAT4Q9H898 229 aa5.77□□□□□ -1.49
VMA21-203ENST00000477649 MRPS16Q9Y3D3 137 aaKnown RBP5.77□□□□□ -1.49
VMA21-203ENST00000477649 FBN3Q75N90 2809 aa5.77□□□□□ -1.49
VMA21-203ENST00000477649 A0A087WX48 190 aa5.76□□□□□ -1.49
VMA21-203ENST00000477649 M0R143 59 aa5.76□□□□□ -1.49
VMA21-203ENST00000477649 DPM2O94777 84 aa5.76□□□□□ -1.49
VMA21-203ENST00000477649 HTN1P15515 57 aa5.76□□□□□ -1.49
VMA21-203ENST00000477649 CRYBA4P53673 196 aa5.76□□□□□ -1.49
VMA21-203ENST00000477649 CFAP126Q5VTH2 177 aa5.76□□□□□ -1.49
VMA21-203ENST00000477649 C2orf66Q6UXQ4 117 aa5.76□□□□□ -1.49
VMA21-203ENST00000477649 OVOL2Q9BRP0 275 aa5.76□□□□□ -1.49
VMA21-203ENST00000477649 JPT2Q9H910 190 aa5.76□□□□□ -1.49
VMA21-203ENST00000477649 TNFRSF18Q9Y5U5 241 aa5.76□□□□□ -1.49
VMA21-203ENST00000477649 TRAV4A0A0B4J268 109 aa5.75□□□□□ -1.49
VMA21-203ENST00000477649 F8VRH5 84 aa5.75□□□□□ -1.49
VMA21-203ENST00000477649 H0Y8G0 127 aa5.75□□□□□ -1.49
VMA21-203ENST00000477649 DLEU1O43261 78 aa5.75□□□□□ -1.49
VMA21-203ENST00000477649 SPRY2O43597 315 aa5.75□□□□□ -1.49
VMA21-203ENST00000477649 IGKCP01834 107 aa5.75□□□□□ -1.49
VMA21-203ENST00000477649 HNRNPA3P51991 378 aaKnown RBP5.75□□□□□ -1.49
VMA21-203ENST00000477649 SMAGPQ0VAQ4 97 aa5.75□□□□□ -1.49
VMA21-203ENST00000477649 ODF1Q14990 250 aa5.75□□□□□ -1.49
VMA21-203ENST00000477649 RRN3P1Q2M238 152 aa5.75□□□□□ -1.49
VMA21-203ENST00000477649 SLC25A34Q6PIV7 304 aa5.75□□□□□ -1.49
VMA21-203ENST00000477649 CSNK1G2-AS1Q8NCQ2 148 aa5.75□□□□□ -1.49
VMA21-203ENST00000477649 OR4C5Q8NGB2 326 aa5.75□□□□□ -1.49
VMA21-203ENST00000477649 SIVA1O15304 175 aa5.74□□□□□ -1.49
VMA21-203ENST00000477649 GIG44P09565 113 aaPredicted RBP5.74□□□□□ -1.49
VMA21-203ENST00000477649 COX8AP10176 69 aa5.74□□□□□ -1.49
VMA21-203ENST00000477649 AZU1P20160 251 aa5.74□□□□□ -1.49
VMA21-203ENST00000477649 APOC4P55056 127 aa5.74□□□□□ -1.49
VMA21-203ENST00000477649 CTAG1AP78358 180 aa5.74□□□□□ -1.49
VMA21-203ENST00000477649 HIST2H2BDQ6DRA6 164 aa5.74□□□□□ -1.49
VMA21-203ENST00000477649 ATOH7Q8N100 152 aa5.74□□□□□ -1.49
VMA21-203ENST00000477649 C18orf15Q96N68 181 aa5.74□□□□□ -1.49
VMA21-203ENST00000477649 C2orf88Q9BSF0 95 aa5.74□□□□□ -1.49
VMA21-203ENST00000477649 MUC4Q99102 2169 aa5.73□□□□□ -1.49
VMA21-203ENST00000477649 TRGV1A0A0A0MS02 117 aa5.73□□□□□ -1.49
VMA21-203ENST00000477649 IGIPA6NJ69 53 aa5.73□□□□□ -1.49
VMA21-203ENST00000477649 RPL35AP18077 110 aaKnown RBP5.73□□□□□ -1.49
VMA21-203ENST00000477649 KRTAP21-3Q3LHN1 58 aa5.73□□□□□ -1.49
VMA21-203ENST00000477649 SHISA2Q6UWI4 295 aa5.73□□□□□ -1.49
VMA21-203ENST00000477649 C20orf203Q8NBC4 194 aa5.73□□□□□ -1.49
VMA21-203ENST00000477649 NEXN-AS1Q8NBZ9 246 aa5.73□□□□□ -1.49
VMA21-203ENST00000477649 PYGO1Q9Y3Y4 419 aa5.73□□□□□ -1.49
VMA21-203ENST00000477649 IGHV3OR16-12A0A075B7B8 117 aa5.72□□□□□ -1.49
VMA21-203ENST00000477649 hDV102S1A0JD36 115 aa5.72□□□□□ -1.49
VMA21-203ENST00000477649 RPL36AP83881 106 aaKnown RBP5.72□□□□□ -1.49
VMA21-203ENST00000477649 PMVKQ15126 192 aa5.72□□□□□ -1.49
VMA21-203ENST00000477649 C12orf54Q6X4T0 127 aa5.72□□□□□ -1.49
VMA21-203ENST00000477649 DAZ4Q86SG3 579 aaKnown RBP5.72□□□□□ -1.49
VMA21-203ENST00000477649 RPL36ALQ969Q0 106 aaKnown RBP5.72□□□□□ -1.49
VMA21-203ENST00000477649 DAZ3Q9NR90 486 aaKnown RBP5.72□□□□□ -1.49
VMA21-203ENST00000477649 MRPL16Q9NX20 251 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms