RNA–Protein interactions for RNA: ENST00000477552.1

PTPRD-209, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 4

Gene PTPRD, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-209ENST00000477552 TRBV10-1A0A0K0K1A3 114 aa6.18□□□□□ -1.42
PTPRD-209ENST00000477552 TMEM223A0PJW6 202 aa6.18□□□□□ -1.42
PTPRD-209ENST00000477552 TSHBP01222 138 aa6.18□□□□□ -1.42
PTPRD-209ENST00000477552 BEAN1Q3B7T3 259 aa6.18□□□□□ -1.42
PTPRD-209ENST00000477552 CD300EQ496F6 205 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-209ENST00000477552 DUX3Q96PT4 197 aa6.18□□□□□ -1.42
PTPRD-209ENST00000477552 YAE1D1Q9NRH1 226 aa6.18□□□□□ -1.42
PTPRD-209ENST00000477552 IGSF10Q6WRI0 2623 aa6.18□□□□□ -1.42
PTPRD-209ENST00000477552 MYO18BQ8IUG5 2567 aa6.17□□□□□ -1.42
PTPRD-209ENST00000477552 A0A0B4J2C4 111 aa6.17□□□□□ -1.42
PTPRD-209ENST00000477552 TINCRA0A1B0GVN0 87 aa6.17□□□□□ -1.42
PTPRD-209ENST00000477552 H3BMG7 143 aa6.17□□□□□ -1.42
PTPRD-209ENST00000477552 TIMM17BO60830 172 aa6.17□□□□□ -1.42
PTPRD-209ENST00000477552 IGHV3-53P01767 116 aa6.17□□□□□ -1.42
PTPRD-209ENST00000477552 DEFB131AP59861 70 aa6.17□□□□□ -1.42
PTPRD-209ENST00000477552 MRPS36P82909 103 aaKnown RBP6.17□□□□□ -1.42
PTPRD-209ENST00000477552 TMEM95Q3KNT9 176 aa6.17□□□□□ -1.42
PTPRD-209ENST00000477552 AMELXQ99217 191 aa6.17□□□□□ -1.42
PTPRD-209ENST00000477552 FLNCQ14315 2725 aa6.17□□□□□ -1.42
PTPRD-209ENST00000477552 A0A0J9YXY3 114 aa6.16□□□□□ -1.42
PTPRD-209ENST00000477552 IFITM1P13164 125 aa6.16□□□□□ -1.42
PTPRD-209ENST00000477552 DEFB114Q30KQ6 69 aa6.16□□□□□ -1.42
PTPRD-209ENST00000477552 C10orf126Q8N4M7 172 aa6.16□□□□□ -1.42
PTPRD-209ENST00000477552 TTTY13Q9BZ97 58 aa6.16□□□□□ -1.42
PTPRD-209ENST00000477552 PPDPFQ9H3Y8 114 aa6.16□□□□□ -1.42
PTPRD-209ENST00000477552 PGPEP1Q9NXJ5 209 aa6.16□□□□□ -1.42
PTPRD-209ENST00000477552 PRO1854Q9UHT4 67 aa6.16□□□□□ -1.42
PTPRD-209ENST00000477552 CR1P17927 2039 aa6.16□□□□□ -1.42
PTPRD-209ENST00000477552 CSPG4Q6UVK1 2322 aa6.15□□□□□ -1.42
PTPRD-209ENST00000477552 IGLV4-3A0A075B6K6 122 aa6.15□□□□□ -1.42
PTPRD-209ENST00000477552 TRAV12-2A0A075B6T6 113 aa6.15□□□□□ -1.42
PTPRD-209ENST00000477552 RS1O15537 224 aa6.15□□□□□ -1.42
PTPRD-209ENST00000477552 IGHV3-30P01768 117 aa6.15□□□□□ -1.42
PTPRD-209ENST00000477552 IGHV3-30-5P0DP03 117 aa6.15□□□□□ -1.42
PTPRD-209ENST00000477552 CD28P10747 220 aa6.15□□□□□ -1.42
PTPRD-209ENST00000477552 DEFB1P60022 68 aa6.15□□□□□ -1.42
PTPRD-209ENST00000477552 UBE2D3P61077 147 aa6.15□□□□□ -1.42
PTPRD-209ENST00000477552 UBE2D2P62837 147 aa6.15□□□□□ -1.42
PTPRD-209ENST00000477552 RPL39P62891 51 aaKnown RBP6.15□□□□□ -1.42
PTPRD-209ENST00000477552 MORN3Q6PF18 240 aaPredicted RBP6.15□□□□□ -1.42
PTPRD-209ENST00000477552 NDUFA11Q86Y39 141 aa6.15□□□□□ -1.42
PTPRD-209ENST00000477552 C1QTNF4Q9BXJ3 329 aa6.15□□□□□ -1.42
PTPRD-209ENST00000477552 JPT2Q9H910 190 aa6.15□□□□□ -1.42
PTPRD-209ENST00000477552 CSDC2Q9Y534 153 aaKnown RBP6.15□□□□□ -1.42
PTPRD-209ENST00000477552 USP9XQ93008 2570 aaPredicted RBP6.15□□□□□ -1.42
PTPRD-209ENST00000477552 UBR5O95071 2799 aaPredicted RBP6.15□□□□□ -1.43
PTPRD-209ENST00000477552 SPG11Q96JI7 2443 aa6.14□□□□□ -1.43
PTPRD-209ENST00000477552 IGKV3-20P01619 116 aa6.14□□□□□ -1.43
PTPRD-209ENST00000477552 COX6CP09669 75 aa6.14□□□□□ -1.43
PTPRD-209ENST00000477552 P0DMU3 169 aa6.14□□□□□ -1.43
PTPRD-209ENST00000477552 FAM231AP0DMU4 169 aa6.14□□□□□ -1.43
PTPRD-209ENST00000477552 FAM231CP0DMU5 169 aa6.14□□□□□ -1.43
PTPRD-209ENST00000477552 ZNF22P17026 224 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-209ENST00000477552 TIRAPP58753 221 aa6.14□□□□□ -1.43
PTPRD-209ENST00000477552 DAZ2Q13117 558 aaKnown RBP6.14□□□□□ -1.43
PTPRD-209ENST00000477552 CIRBPQ14011 172 aaKnown RBP6.14□□□□□ -1.43
PTPRD-209ENST00000477552 DAZ4Q86SG3 579 aaKnown RBP6.14□□□□□ -1.43
PTPRD-209ENST00000477552 STHQ8IWL8 128 aa6.14□□□□□ -1.43
PTPRD-209ENST00000477552 TMEM61Q8N0U2 210 aa6.14□□□□□ -1.43
PTPRD-209ENST00000477552 KLHL30-AS1Q8NEE0 82 aa6.14□□□□□ -1.43
PTPRD-209ENST00000477552 LINC01587Q99440 93 aa6.14□□□□□ -1.43
PTPRD-209ENST00000477552 MAP6D1Q9H9H5 199 aa6.14□□□□□ -1.43
PTPRD-209ENST00000477552 DAZ3Q9NR90 486 aaKnown RBP6.14□□□□□ -1.43
PTPRD-209ENST00000477552 ACACBO00763 2458 aa6.14□□□□□ -1.43
PTPRD-209ENST00000477552 IGHV1-58A0A0C4DH39 117 aa6.13□□□□□ -1.43
PTPRD-209ENST00000477552 TMEM262E9PQX1 116 aa6.13□□□□□ -1.43
PTPRD-209ENST00000477552 H7C423 109 aa6.13□□□□□ -1.43
PTPRD-209ENST00000477552 K7ERJ3 54 aa6.13□□□□□ -1.43
PTPRD-209ENST00000477552 SLURP1P55000 103 aa6.13□□□□□ -1.43
PTPRD-209ENST00000477552 FHL3Q13643 280 aa6.13□□□□□ -1.43
PTPRD-209ENST00000477552 CFAP126Q5VTH2 177 aa6.13□□□□□ -1.43
PTPRD-209ENST00000477552 DGAT2L7PQ6IED9 249 aa6.13□□□□□ -1.43
PTPRD-209ENST00000477552 MTURNQ8N3F0 131 aa6.13□□□□□ -1.43
PTPRD-209ENST00000477552 ZNF843Q8N446 348 aa6.13□□□□□ -1.43
PTPRD-209ENST00000477552 ZNRF2Q8NHG8 242 aa6.13□□□□□ -1.43
PTPRD-209ENST00000477552 Q96MF0 132 aa6.13□□□□□ -1.43
PTPRD-209ENST00000477552 LINC01600Q96MT4 127 aa6.13□□□□□ -1.43
PTPRD-209ENST00000477552 SPANXDQ9BXN6 97 aa6.13□□□□□ -1.43
PTPRD-209ENST00000477552 C16orf95Q9H693 158 aa6.13□□□□□ -1.43
PTPRD-209ENST00000477552 GEMIN7Q9H840 131 aaKnown RBP6.13□□□□□ -1.43
PTPRD-209ENST00000477552 SPANXCQ9NY87 97 aa6.13□□□□□ -1.43
PTPRD-209ENST00000477552 LOC107984156A0A0G2JMH3 177 aa6.12□□□□□ -1.43
PTPRD-209ENST00000477552 HERVK_113P63121 156 aa6.12□□□□□ -1.43
PTPRD-209ENST00000477552 RPL36AP83881 106 aaKnown RBP6.12□□□□□ -1.43
PTPRD-209ENST00000477552 FAM19A3Q7Z5A8 133 aa6.12□□□□□ -1.43
PTPRD-209ENST00000477552 ARL17AQ8IVW1 177 aa6.12□□□□□ -1.43
PTPRD-209ENST00000477552 RPL36ALQ969Q0 106 aaKnown RBP6.12□□□□□ -1.43
PTPRD-209ENST00000477552 SIGMAR1Q99720 223 aa6.12□□□□□ -1.43
PTPRD-209ENST00000477552 ERG28Q9UKR5 140 aa6.12□□□□□ -1.43
PTPRD-209ENST00000477552 DOPEY2Q9Y3R5 2298 aa6.12□□□□□ -1.43
PTPRD-209ENST00000477552 TSSC4Q9Y5U2 329 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-209ENST00000477552 UTP20O75691 2785 aaKnown RBP6.12□□□□□ -1.43
PTPRD-209ENST00000477552 CREBBPQ92793 2442 aa6.11□□□□□ -1.43
PTPRD-209ENST00000477552 IGLV5-45A0A087WSX0 123 aa6.11□□□□□ -1.43
PTPRD-209ENST00000477552 TRAV4A0A0B4J268 109 aa6.11□□□□□ -1.43
PTPRD-209ENST00000477552 TEX48A0A1B0GUV7 120 aa6.11□□□□□ -1.43
PTPRD-209ENST00000477552 KNCNA6PVL3 124 aa6.11□□□□□ -1.43
PTPRD-209ENST00000477552 APOMO95445 188 aa6.11□□□□□ -1.43
PTPRD-209ENST00000477552 TSPAN13O95857 204 aa6.11□□□□□ -1.43
PTPRD-209ENST00000477552 CFC1BP0CG36 223 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms