RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 KIR2DL4Q99706 377 aa4.87□□□□□ -1.63
LDB3-206ENST00000477489 MIEN1Q9BRT3 115 aa4.87□□□□□ -1.63
LDB3-206ENST00000477489 KRTAP4-2Q9BYR5 136 aa4.87□□□□□ -1.63
LDB3-206ENST00000477489 ST20Q9HBF5 79 aa4.87□□□□□ -1.63
LDB3-206ENST00000477489 MDFICQ9P1T7 246 aa4.87□□□□□ -1.63
LDB3-206ENST00000477489 UQCR10Q9UDW1 63 aa4.87□□□□□ -1.63
LDB3-206ENST00000477489 TIMM8BQ9Y5J9 83 aaPredicted RBP4.87□□□□□ -1.63
LDB3-206ENST00000477489 WNK1Q9H4A3 2382 aa4.86□□□□□ -1.63
LDB3-206ENST00000477489 TRAV12-1A0A0B4J245 112 aa4.86□□□□□ -1.63
LDB3-206ENST00000477489 TRBV27A0A0K0K1C4 114 aa4.86□□□□□ -1.63
LDB3-206ENST00000477489 CRYGDP07320 174 aa4.86□□□□□ -1.63
LDB3-206ENST00000477489 MGPP08493 103 aa4.86□□□□□ -1.63
LDB3-206ENST00000477489 NPSP0C0P6 89 aa4.86□□□□□ -1.63
LDB3-206ENST00000477489 RBMY1A1P0DJD3 496 aaKnown RBP4.86□□□□□ -1.63
LDB3-206ENST00000477489 RBMY1CP0DJD4 496 aa4.86□□□□□ -1.63
LDB3-206ENST00000477489 POLR2KP53803 58 aaKnown RBP4.86□□□□□ -1.63
LDB3-206ENST00000477489 KRTAP10-3P60369 221 aa4.86□□□□□ -1.63
LDB3-206ENST00000477489 DAZ2Q13117 558 aaKnown RBP4.86□□□□□ -1.63
LDB3-206ENST00000477489 RBMY1FQ15415 496 aaKnown RBP4.86□□□□□ -1.63
LDB3-206ENST00000477489 RHOHQ15669 191 aa4.86□□□□□ -1.63
LDB3-206ENST00000477489 KRTAP24-1Q3LI83 254 aa4.86□□□□□ -1.63
LDB3-206ENST00000477489 HIST2H2BDQ6DRA6 164 aa4.86□□□□□ -1.63
LDB3-206ENST00000477489 SUMO4Q6EEV6 95 aa4.86□□□□□ -1.63
LDB3-206ENST00000477489 ZNF705AQ6ZN79 300 aaPredicted RBP4.86□□□□□ -1.63
LDB3-206ENST00000477489 GTSCR1Q86UQ5 136 aa4.86□□□□□ -1.63
LDB3-206ENST00000477489 WFDC9Q8NEX5 89 aa4.86□□□□□ -1.63
LDB3-206ENST00000477489 IL17DQ8TAD2 202 aa4.86□□□□□ -1.63
LDB3-206ENST00000477489 LINC01587Q99440 93 aa4.86□□□□□ -1.63
LDB3-206ENST00000477489 PMCHL2Q9BQD1 86 aa4.86□□□□□ -1.63
LDB3-206ENST00000477489 SELENOKQ9Y6D0 94 aa4.86□□□□□ -1.63
LDB3-206ENST00000477489 M0QY20 66 aa4.85□□□□□ -1.63
LDB3-206ENST00000477489 RS1O15537 224 aa4.85□□□□□ -1.63
LDB3-206ENST00000477489 SPATA45Q537H7 98 aa4.85□□□□□ -1.63
LDB3-206ENST00000477489 TOMM6Q96B49 74 aa4.85□□□□□ -1.63
LDB3-206ENST00000477489 C16orf74Q96GX8 76 aa4.85□□□□□ -1.63
LDB3-206ENST00000477489 TMEM208Q9BTX3 173 aa4.85□□□□□ -1.63
LDB3-206ENST00000477489 ZMAT5Q9UDW3 170 aaKnown RBP4.85□□□□□ -1.63
LDB3-206ENST00000477489 TRAV26-2A0A0B4J265 109 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 TRBV10-1A0A0K0K1A3 114 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 SDHAF1A6NFY7 115 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 SMIM9A6NGZ8 99 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 LINC00587B1AMM8 73 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 F5H697 171 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.84□□□□□ -1.63
LDB3-206ENST00000477489 I3L3M4 83 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 NUDT3O95989 172 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 IGLC3P0DOY3 106 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 GATA1P15976 413 aaPredicted RBP4.84□□□□□ -1.63
LDB3-206ENST00000477489 CRYBA4P53673 196 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 ZNF56Q15929 161 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 PAPPA-AS1Q5QFB9 102 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 UFSP1Q6NVU6 142 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 ERASQ7Z444 233 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 C1orf158Q8N1D5 194 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.84□□□□□ -1.63
LDB3-206ENST00000477489 KIR2DL5BQ8NHK3 375 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 RNASE8Q8TDE3 154 aaKnown RBP4.84□□□□□ -1.63
LDB3-206ENST00000477489 TMEM141Q96I45 108 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 TIMM17AQ99595 171 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 KRTAP4-11Q9BYQ6 195 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 CSTL1Q9H114 145 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 ZMAT4Q9H898 229 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 CYSLTR1Q9Y271 337 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 PAM16Q9Y3D7 125 aa4.84□□□□□ -1.63
LDB3-206ENST00000477489 A0A087WWL8 130 aa4.83□□□□□ -1.64
LDB3-206ENST00000477489 DLEU1O43261 78 aa4.83□□□□□ -1.64
LDB3-206ENST00000477489 GAS8-AS1O95177 125 aa4.83□□□□□ -1.64
LDB3-206ENST00000477489 IGHV3-53P01767 116 aa4.83□□□□□ -1.64
LDB3-206ENST00000477489 PLNP26678 52 aa4.83□□□□□ -1.64
LDB3-206ENST00000477489 FXYD7P58549 80 aa4.83□□□□□ -1.64
LDB3-206ENST00000477489 PRR31Q5SQ13 230 aa4.83□□□□□ -1.64
LDB3-206ENST00000477489 FAM74A4Q5TZK3 123 aa4.83□□□□□ -1.64
LDB3-206ENST00000477489 Q6ZN92 141 aa4.83□□□□□ -1.64
LDB3-206ENST00000477489 LINC00173Q6ZV60 143 aa4.83□□□□□ -1.64
LDB3-206ENST00000477489 CSNK1G2-AS1Q8NCQ2 148 aa4.83□□□□□ -1.64
LDB3-206ENST00000477489 C18orf15Q96N68 181 aa4.83□□□□□ -1.64
LDB3-206ENST00000477489 OVOL2Q9BRP0 275 aa4.83□□□□□ -1.64
LDB3-206ENST00000477489 PRO1933Q9H354 126 aa4.83□□□□□ -1.64
LDB3-206ENST00000477489 XCL2Q9UBD3 114 aa4.83□□□□□ -1.64
LDB3-206ENST00000477489 MRPS16Q9Y3D3 137 aaKnown RBP4.83□□□□□ -1.64
LDB3-206ENST00000477489 MEGF8Q7Z7M0 2845 aa4.83□□□□□ -1.64
LDB3-206ENST00000477489 TGP01266 2768 aa4.83□□□□□ -1.64
LDB3-206ENST00000477489 A0A087WX48 190 aa4.82□□□□□ -1.64
LDB3-206ENST00000477489 TRAV4A0A0B4J268 109 aa4.82□□□□□ -1.64
LDB3-206ENST00000477489 PRSS1P07477 247 aa4.82□□□□□ -1.64
LDB3-206ENST00000477489 IGLL1P15814 213 aa4.82□□□□□ -1.64
LDB3-206ENST00000477489 SMAGPQ0VAQ4 97 aa4.82□□□□□ -1.64
LDB3-206ENST00000477489 ODF1Q14990 250 aa4.82□□□□□ -1.64
LDB3-206ENST00000477489 RRN3P1Q2M238 152 aa4.82□□□□□ -1.64
LDB3-206ENST00000477489 CFAP126Q5VTH2 177 aa4.82□□□□□ -1.64
LDB3-206ENST00000477489 C2orf66Q6UXQ4 117 aa4.82□□□□□ -1.64
LDB3-206ENST00000477489 RPL39LQ96EH5 51 aaKnown RBP4.82□□□□□ -1.64
LDB3-206ENST00000477489 C14orf144Q96I85 54 aa4.82□□□□□ -1.64
LDB3-206ENST00000477489 SCGB3A1Q96QR1 104 aa4.82□□□□□ -1.64
LDB3-206ENST00000477489 PYGO1Q9Y3Y4 419 aa4.82□□□□□ -1.64
LDB3-206ENST00000477489 TNFRSF18Q9Y5U5 241 aa4.82□□□□□ -1.64
LDB3-206ENST00000477489 F8VRH5 84 aa4.81□□□□□ -1.64
LDB3-206ENST00000477489 M0R143 59 aa4.81□□□□□ -1.64
LDB3-206ENST00000477489 SIVA1O15304 175 aa4.81□□□□□ -1.64
LDB3-206ENST00000477489 SPRY2O43597 315 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms