RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 DEFA3P59666 94 aa6.08□□□□□ -1.44
COL4A5-204ENST00000477429 RPL36AP83881 106 aaKnown RBP6.08□□□□□ -1.44
COL4A5-204ENST00000477429 MIAQ16674 131 aa6.08□□□□□ -1.44
COL4A5-204ENST00000477429 PRR27Q6MZM9 219 aa6.08□□□□□ -1.44
COL4A5-204ENST00000477429 Q86TA4 180 aa6.08□□□□□ -1.44
COL4A5-204ENST00000477429 OR11H4Q8NGC9 324 aa6.08□□□□□ -1.44
COL4A5-204ENST00000477429 SCGB1C1Q8TD33 95 aa6.08□□□□□ -1.44
COL4A5-204ENST00000477429 RPL36ALQ969Q0 106 aaKnown RBP6.08□□□□□ -1.44
COL4A5-204ENST00000477429 CHCHD5Q9BSY4 110 aa6.08□□□□□ -1.44
COL4A5-204ENST00000477429 IGHV3-64A0A075B6Q5 118 aa6.07□□□□□ -1.44
COL4A5-204ENST00000477429 TRBV10-1A0A0K0K1A3 114 aa6.07□□□□□ -1.44
COL4A5-204ENST00000477429 MUC21A0A140T8X8 626 aa6.07□□□□□ -1.44
COL4A5-204ENST00000477429 MPC2O95563 127 aa6.07□□□□□ -1.44
COL4A5-204ENST00000477429 CDC34P49427 236 aaPredicted RBP6.07□□□□□ -1.44
COL4A5-204ENST00000477429 ZFP69Q49AA0 526 aa6.07□□□□□ -1.44
COL4A5-204ENST00000477429 WDR73Q6P4I2 378 aa6.07□□□□□ -1.44
COL4A5-204ENST00000477429 PRSS3P2Q8NHM4 247 aa6.07□□□□□ -1.44
COL4A5-204ENST00000477429 DPH3Q96FX2 82 aa6.07□□□□□ -1.44
COL4A5-204ENST00000477429 IGLV4-60A0A075B6I1 120 aa6.06□□□□□ -1.44
COL4A5-204ENST00000477429 SRSF9Q13242 221 aaKnown RBP eCLIP6.06□□□□□ -1.44
COL4A5-204ENST00000477429 ZNF726P1Q15940 193 aa6.06□□□□□ -1.44
COL4A5-204ENST00000477429 SAPCD1Q5SSQ6 148 aa6.06□□□□□ -1.44
COL4A5-204ENST00000477429 KCNIP4Q6PIL6 250 aa6.06□□□□□ -1.44
COL4A5-204ENST00000477429 C15orf56Q8N910 161 aa6.06□□□□□ -1.44
COL4A5-204ENST00000477429 C20orf203Q8NBC4 194 aa6.06□□□□□ -1.44
COL4A5-204ENST00000477429 OR10AG1Q8NH19 301 aa6.06□□□□□ -1.44
COL4A5-204ENST00000477429 LYPD6BQ8NI32 183 aa6.06□□□□□ -1.44
COL4A5-204ENST00000477429 FAM240BA0A1B0GVZ2 78 aa6.05□□□□□ -1.44
COL4A5-204ENST00000477429 IFITM3Q01628 133 aa6.05□□□□□ -1.44
COL4A5-204ENST00000477429 COX6A2Q02221 97 aa6.05□□□□□ -1.44
COL4A5-204ENST00000477429 HSD17B11Q8NBQ5 300 aa6.05□□□□□ -1.44
COL4A5-204ENST00000477429 GTSF1Q8WW33 167 aa6.05□□□□□ -1.44
COL4A5-204ENST00000477429 RNF185Q96GF1 192 aa6.05□□□□□ -1.44
COL4A5-204ENST00000477429 DPH3P1Q9H4G8 78 aa6.05□□□□□ -1.44
COL4A5-204ENST00000477429 PHLDA3Q9Y5J5 127 aa6.05□□□□□ -1.44
COL4A5-204ENST00000477429 A0A0U1RQV1 116 aa6.04□□□□□ -1.44
COL4A5-204ENST00000477429 K7EQM0 130 aa6.04□□□□□ -1.44
COL4A5-204ENST00000477429 TPT1P13693 172 aaKnown RBP6.04□□□□□ -1.44
COL4A5-204ENST00000477429 ATP6V0CP27449 155 aa6.04□□□□□ -1.44
COL4A5-204ENST00000477429 UBE2G2P60604 165 aa6.04□□□□□ -1.44
COL4A5-204ENST00000477429 REG3AQ06141 175 aa6.04□□□□□ -1.44
COL4A5-204ENST00000477429 ZNF56Q15929 161 aa6.04□□□□□ -1.44
COL4A5-204ENST00000477429 COX8CQ7Z4L0 72 aa6.04□□□□□ -1.44
COL4A5-204ENST00000477429 ZNF471Q9BX82 626 aaPredicted RBP6.04□□□□□ -1.44
COL4A5-204ENST00000477429 A0A096LNI7 61 aa6.03□□□□□ -1.44
COL4A5-204ENST00000477429 IGKV2-24A0A0C4DH68 120 aa6.03□□□□□ -1.44
COL4A5-204ENST00000477429 TRBV6-1A0A0K0K1D8 114 aa6.03□□□□□ -1.44
COL4A5-204ENST00000477429 PEX7O00628 323 aa6.03□□□□□ -1.44
COL4A5-204ENST00000477429 RAB4BP61018 213 aa6.03□□□□□ -1.44
COL4A5-204ENST00000477429 ZNF674Q2M3X9 581 aa6.03□□□□□ -1.44
COL4A5-204ENST00000477429 MAJINQ3KP22 176 aa6.03□□□□□ -1.44
COL4A5-204ENST00000477429 ZFP82Q8N141 532 aa6.03□□□□□ -1.44
COL4A5-204ENST00000477429 DERL1Q9BUN8 251 aa6.03□□□□□ -1.44
COL4A5-204ENST00000477429 VAX2Q9UIW0 290 aa6.03□□□□□ -1.44
COL4A5-204ENST00000477429 SSTP61278 116 aa6.02□□□□□ -1.45
COL4A5-204ENST00000477429 CYCSP99999 105 aaKnown RBP6.02□□□□□ -1.45
COL4A5-204ENST00000477429 HIGD2BQ4VC39 106 aa6.02□□□□□ -1.45
COL4A5-204ENST00000477429 STPG4Q8N801 248 aa6.02□□□□□ -1.45
COL4A5-204ENST00000477429 C7orf33Q8WU49 177 aa6.02□□□□□ -1.45
COL4A5-204ENST00000477429 A0A1W2PRE2 83 aa6.01□□□□□ -1.45
COL4A5-204ENST00000477429 FAM74A7A6NL05 159 aa6.01□□□□□ -1.45
COL4A5-204ENST00000477429 CXorf1O96002 111 aa6.01□□□□□ -1.45
COL4A5-204ENST00000477429 IQCJQ1A5X6 159 aa6.01□□□□□ -1.45
COL4A5-204ENST00000477429 FAM162BQ5T6X4 162 aa6.01□□□□□ -1.45
COL4A5-204ENST00000477429 CCDC32Q9BV29 185 aa6.01□□□□□ -1.45
COL4A5-204ENST00000477429 TMEM167BQ9NRX6 74 aa6.01□□□□□ -1.45
COL4A5-204ENST00000477429 SCGB1D1O95968 90 aa6□□□□□ -1.45
COL4A5-204ENST00000477429 IFNA7P01567 189 aa6□□□□□ -1.45
COL4A5-204ENST00000477429 SPINK6Q6UWN8 80 aa6□□□□□ -1.45
COL4A5-204ENST00000477429 GAGE12HA6NDE8 117 aa5.99□□□□□ -1.45
COL4A5-204ENST00000477429 INMT-MINDY4F8WBC2 141 aa5.99□□□□□ -1.45
COL4A5-204ENST00000477429 NDUFS6O75380 124 aaKnown RBP5.99□□□□□ -1.45
COL4A5-204ENST00000477429 LTAP01374 205 aa5.99□□□□□ -1.45
COL4A5-204ENST00000477429 Q5BKY6 102 aa5.99□□□□□ -1.45
COL4A5-204ENST00000477429 LINC00526Q96FQ7 95 aa5.99□□□□□ -1.45
COL4A5-204ENST00000477429 PSMG3Q9BT73 122 aaPredicted RBP5.99□□□□□ -1.45
COL4A5-204ENST00000477429 TRBV25-1A0A075B6N4 114 aa5.98□□□□□ -1.45
COL4A5-204ENST00000477429 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.98□□□□□ -1.45
COL4A5-204ENST00000477429 IGHV1-24A0A0C4DH33 117 aa5.98□□□□□ -1.45
COL4A5-204ENST00000477429 F5H697 171 aa5.98□□□□□ -1.45
COL4A5-204ENST00000477429 M0QY20 66 aa5.98□□□□□ -1.45
COL4A5-204ENST00000477429 SNAI2O43623 268 aa5.98□□□□□ -1.45
COL4A5-204ENST00000477429 RPS10P46783 165 aaKnown RBP5.98□□□□□ -1.45
COL4A5-204ENST00000477429 REG3GQ6UW15 175 aa5.98□□□□□ -1.45
COL4A5-204ENST00000477429 ACTR3CQ9C0K3 210 aaPredicted RBP5.98□□□□□ -1.45
COL4A5-204ENST00000477429 ZFP30Q9Y2G7 519 aa5.98□□□□□ -1.45
COL4A5-204ENST00000477429 TRAV8-4A0A0B4J246 113 aa5.97□□□□□ -1.45
COL4A5-204ENST00000477429 H7C1H1 209 aa5.97□□□□□ -1.45
COL4A5-204ENST00000477429 P01737 135 aa5.97□□□□□ -1.45
COL4A5-204ENST00000477429 ENKURQ8TC29 256 aa5.97□□□□□ -1.45
COL4A5-204ENST00000477429 MARVELD1Q9BSK0 173 aa5.97□□□□□ -1.45
COL4A5-204ENST00000477429 TNFSF18Q9UNG2 199 aa5.97□□□□□ -1.45
COL4A5-204ENST00000477429 IGKV3OR2-268A0A0C4DH90 116 aa5.96□□□□□ -1.46
COL4A5-204ENST00000477429 A0A1B0GUV1 79 aa5.96□□□□□ -1.46
COL4A5-204ENST00000477429 SSNA1O43805 119 aa5.96□□□□□ -1.46
COL4A5-204ENST00000477429 PET100P0DJ07 73 aa5.96□□□□□ -1.46
COL4A5-204ENST00000477429 NKX2-5P52952 324 aaPredicted RBP5.96□□□□□ -1.46
COL4A5-204ENST00000477429 PKIAP61925 76 aa5.96□□□□□ -1.46
COL4A5-204ENST00000477429 SERF2P84101 59 aa5.96□□□□□ -1.46
COL4A5-204ENST00000477429 RPL7L1Q6DKI1 246 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms