RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 TCAPO15273 167 aa10.3□□□□□ -0.76
COL4A6-206ENST00000477085 GAGE7O76087 117 aa10.3□□□□□ -0.76
COL4A6-206ENST00000477085 GAGE12FP0CL80 117 aa10.3□□□□□ -0.76
COL4A6-206ENST00000477085 GAGE12GP0CL81 117 aa10.3□□□□□ -0.76
COL4A6-206ENST00000477085 GAGE12IP0CL82 117 aa10.3□□□□□ -0.76
COL4A6-206ENST00000477085 POLR2KP53803 58 aaKnown RBP10.3□□□□□ -0.76
COL4A6-206ENST00000477085 NEGR1Q7Z3B1 354 aa10.3□□□□□ -0.76
COL4A6-206ENST00000477085 RNF183Q96D59 192 aa10.3□□□□□ -0.76
COL4A6-206ENST00000477085 NOTCH1P46531 2555 aa10.3□□□□□ -0.76
COL4A6-206ENST00000477085 TRBV6-5A0A0K0K1A5 114 aa10.29□□□□□ -0.76
COL4A6-206ENST00000477085 IGHV3-53P01767 116 aa10.29□□□□□ -0.76
COL4A6-206ENST00000477085 OR4C5Q8NGB2 326 aa10.29□□□□□ -0.76
COL4A6-206ENST00000477085 EDA2RQ9HAV5 297 aa10.29□□□□□ -0.76
COL4A6-206ENST00000477085 ZMAT5Q9UDW3 170 aaKnown RBP10.29□□□□□ -0.76
COL4A6-206ENST00000477085 DEFB4AO15263 64 aa10.29□□□□□ -0.76
COL4A6-206ENST00000477085 ZFP2Q6ZN57 461 aa10.29□□□□□ -0.76
COL4A6-206ENST00000477085 DEFB104AQ8WTQ1 72 aa10.29□□□□□ -0.76
COL4A6-206ENST00000477085 TMEM70Q9BUB7 260 aa10.29□□□□□ -0.76
COL4A6-206ENST00000477085 TRAV4A0A0B4J268 109 aa10.28□□□□□ -0.76
COL4A6-206ENST00000477085 IGHV4-28A0A0C4DH34 117 aa10.28□□□□□ -0.76
COL4A6-206ENST00000477085 PPP1R17O96001 155 aa10.28□□□□□ -0.76
COL4A6-206ENST00000477085 PKIAP61925 76 aa10.28□□□□□ -0.76
COL4A6-206ENST00000477085 LINC00612Q8N6U2 182 aa10.28□□□□□ -0.76
COL4A6-206ENST00000477085 Q8NAQ8 132 aa10.28□□□□□ -0.76
COL4A6-206ENST00000477085 ST20Q9HBF5 79 aa10.28□□□□□ -0.76
COL4A6-206ENST00000477085 RHODO00212 210 aa10.27□□□□□ -0.77
COL4A6-206ENST00000477085 SCGB1D1O95968 90 aa10.27□□□□□ -0.77
COL4A6-206ENST00000477085 C3orf79P0CE67 100 aa10.27□□□□□ -0.77
COL4A6-206ENST00000477085 Q8N976 141 aa10.27□□□□□ -0.77
COL4A6-206ENST00000477085 SDHAF1A6NFY7 115 aa10.26□□□□□ -0.77
COL4A6-206ENST00000477085 RPL32P62910 135 aaKnown RBP10.26□□□□□ -0.77
COL4A6-206ENST00000477085 KPRPQ5T749 579 aaPredicted RBP10.26□□□□□ -0.77
COL4A6-206ENST00000477085 RETNQ9HD89 108 aa10.26□□□□□ -0.77
COL4A6-206ENST00000477085 TRGV2A0A075B6R0 118 aa10.26□□□□□ -0.77
COL4A6-206ENST00000477085 LEPROTL1O95214 131 aa10.26□□□□□ -0.77
COL4A6-206ENST00000477085 KRTDAPP60985 99 aa10.26□□□□□ -0.77
COL4A6-206ENST00000477085 LAGE3Q14657 143 aa10.26□□□□□ -0.77
COL4A6-206ENST00000477085 SPATA12Q7Z6I5 190 aa10.26□□□□□ -0.77
COL4A6-206ENST00000477085 TRBV27A0A0K0K1C4 114 aa10.25□□□□□ -0.77
COL4A6-206ENST00000477085 TSTD3H0UI37 97 aa10.25□□□□□ -0.77
COL4A6-206ENST00000477085 DEFB130BP0DP73 79 aa10.25□□□□□ -0.77
COL4A6-206ENST00000477085 DEFB130AP0DP74 79 aa10.25□□□□□ -0.77
COL4A6-206ENST00000477085 FCER1GP30273 86 aa10.25□□□□□ -0.77
COL4A6-206ENST00000477085 FAM222AQ5U5X8 452 aa10.25□□□□□ -0.77
COL4A6-206ENST00000477085 ZNF664Q8N3J9 261 aa10.25□□□□□ -0.77
COL4A6-206ENST00000477085 NEXN-AS1Q8NBZ9 246 aa10.25□□□□□ -0.77
COL4A6-206ENST00000477085 MGAM2Q2M2H8 2515 aa10.25□□□□□ -0.77
COL4A6-206ENST00000477085 K7EIL1 84 aa10.24□□□□□ -0.77
COL4A6-206ENST00000477085 VCYO14598 125 aa10.24□□□□□ -0.77
COL4A6-206ENST00000477085 HBDP02042 147 aa10.24□□□□□ -0.77
COL4A6-206ENST00000477085 MIFP14174 115 aa10.24□□□□□ -0.77
COL4A6-206ENST00000477085 PRO1933Q9H354 126 aa10.24□□□□□ -0.77
COL4A6-206ENST00000477085 H7C1H1 209 aa10.24□□□□□ -0.77
COL4A6-206ENST00000477085 TEX43Q6ZNM6 134 aa10.24□□□□□ -0.77
COL4A6-206ENST00000477085 SLC25A29Q8N8R3 303 aa10.24□□□□□ -0.77
COL4A6-206ENST00000477085 DKK2Q9UBU2 259 aa10.24□□□□□ -0.77
COL4A6-206ENST00000477085 FHL2Q14192 279 aa10.23□□□□□ -0.77
COL4A6-206ENST00000477085 C18orf15Q96N68 181 aa10.23□□□□□ -0.77
COL4A6-206ENST00000477085 CELA1Q9UNI1 258 aa10.23□□□□□ -0.77
COL4A6-206ENST00000477085 TSHBP01222 138 aa10.22□□□□□ -0.77
COL4A6-206ENST00000477085 RIPPLY3P57055 190 aa10.22□□□□□ -0.77
COL4A6-206ENST00000477085 NUDT3O95989 172 aa10.21□□□□□ -0.77
COL4A6-206ENST00000477085 BTF3P20290 206 aaKnown RBP10.21□□□□□ -0.77
COL4A6-206ENST00000477085 SBSPONQ8IVN8 264 aa10.21□□□□□ -0.77
COL4A6-206ENST00000477085 HSPB8Q9UJY1 196 aa10.21□□□□□ -0.77
COL4A6-206ENST00000477085 TP53TG1Q9Y2A0 90 aa10.21□□□□□ -0.77
COL4A6-206ENST00000477085 LYRM9A8MSI8 78 aa10.21□□□□□ -0.78
COL4A6-206ENST00000477085 K7EMI3 77 aa10.21□□□□□ -0.78
COL4A6-206ENST00000477085 DDTP30046 118 aa10.21□□□□□ -0.78
COL4A6-206ENST00000477085 ORMDL2Q53FV1 153 aa10.21□□□□□ -0.78
COL4A6-206ENST00000477085 TNFRSF18Q9Y5U5 241 aa10.21□□□□□ -0.78
COL4A6-206ENST00000477085 DNHD1Q96M86 4753 aa10.2□□□□□ -0.78
COL4A6-206ENST00000477085 LOC100131303A0A0U1RQF7 123 aa10.2□□□□□ -0.78
COL4A6-206ENST00000477085 SYS1-DBNDD2H3BUS1 97 aa10.2□□□□□ -0.78
COL4A6-206ENST00000477085 I3L3M4 83 aa10.2□□□□□ -0.78
COL4A6-206ENST00000477085 K7EQD1 137 aa10.2□□□□□ -0.78
COL4A6-206ENST00000477085 CTAG1AP78358 180 aa10.2□□□□□ -0.78
COL4A6-206ENST00000477085 DNAJC30Q96LL9 226 aa10.2□□□□□ -0.78
COL4A6-206ENST00000477085 ZNRF2Q8NHG8 242 aa10.19□□□□□ -0.78
COL4A6-206ENST00000477085 KIR2DL4Q99706 377 aa10.19□□□□□ -0.78
COL4A6-206ENST00000477085 TRGV4A0A0C4DH28 118 aa10.19□□□□□ -0.78
COL4A6-206ENST00000477085 IGHV3-38A0A0C4DH36 116 aa10.19□□□□□ -0.78
COL4A6-206ENST00000477085 CIDEAO60543 219 aa10.19□□□□□ -0.78
COL4A6-206ENST00000477085 TOMM6Q96B49 74 aa10.19□□□□□ -0.78
COL4A6-206ENST00000477085 TENM3Q9P273 2699 aa10.18□□□□□ -0.78
COL4A6-206ENST00000477085 TRBV7-3A0A075B6L6 115 aa10.18□□□□□ -0.78
COL4A6-206ENST00000477085 TRBV10-1A0A0K0K1A3 114 aa10.18□□□□□ -0.78
COL4A6-206ENST00000477085 TRBV6-4A0A1B0GX49 114 aa10.18□□□□□ -0.78
COL4A6-206ENST00000477085 C2orf66Q6UXQ4 117 aa10.18□□□□□ -0.78
COL4A6-206ENST00000477085 PHLDA1Q8WV24 401 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-206ENST00000477085 IFI27L1Q96BM0 104 aa10.18□□□□□ -0.78
COL4A6-206ENST00000477085 MAP1LC3CQ9BXW4 147 aa10.18□□□□□ -0.78
COL4A6-206ENST00000477085 H0Y8G0 127 aa10.17□□□□□ -0.78
COL4A6-206ENST00000477085 RPL39P62891 51 aaKnown RBP10.17□□□□□ -0.78
COL4A6-206ENST00000477085 GAGE12JA6NER3 117 aa10.16□□□□□ -0.78
COL4A6-206ENST00000477085 SPART-AS1P0CW21 52 aa10.16□□□□□ -0.78
COL4A6-206ENST00000477085 DEFA6Q01524 100 aa10.16□□□□□ -0.78
COL4A6-206ENST00000477085 GAGE1Q13065 139 aa10.16□□□□□ -0.78
COL4A6-206ENST00000477085 GAGE4Q13068 117 aa10.16□□□□□ -0.78
COL4A6-206ENST00000477085 GAGE5Q13069 117 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms