RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 KRTAP4-8A0A0G2JLE6 195 aa7.1□□□□□ -1.27
BRCA1-213ENST00000476777 SH2D1AO60880 128 aa7.1□□□□□ -1.27
BRCA1-213ENST00000476777 REG3AQ06141 175 aa7.1□□□□□ -1.27
BRCA1-213ENST00000476777 GAGE6Q13070 117 aa7.1□□□□□ -1.27
BRCA1-213ENST00000476777 REG3GQ6UW15 175 aa7.1□□□□□ -1.27
BRCA1-213ENST00000476777 SPINK6Q6UWN8 80 aa7.1□□□□□ -1.27
BRCA1-213ENST00000476777 COX8CQ7Z4L0 72 aa7.1□□□□□ -1.27
BRCA1-213ENST00000476777 Q86TA4 180 aa7.1□□□□□ -1.27
BRCA1-213ENST00000476777 TMEM167BQ9NRX6 74 aa7.1□□□□□ -1.27
BRCA1-213ENST00000476777 VAX2Q9UIW0 290 aa7.1□□□□□ -1.27
BRCA1-213ENST00000476777 COX6A2Q02221 97 aa7.09□□□□□ -1.27
BRCA1-213ENST00000476777 TMEM97Q5BJF2 176 aa7.09□□□□□ -1.27
BRCA1-213ENST00000476777 FAM162BQ5T6X4 162 aa7.09□□□□□ -1.27
BRCA1-213ENST00000476777 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-213ENST00000476777 TMSB15BA0A087X1C1 80 aa7.08□□□□□ -1.28
BRCA1-213ENST00000476777 TRAV8-4A0A0B4J246 113 aa7.08□□□□□ -1.28
BRCA1-213ENST00000476777 MUC21A0A0G2JKD1 596 aa7.08□□□□□ -1.28
BRCA1-213ENST00000476777 TRBV6-1A0A0K0K1D8 114 aa7.08□□□□□ -1.28
BRCA1-213ENST00000476777 A0A1W2PRE2 83 aa7.08□□□□□ -1.28
BRCA1-213ENST00000476777 CXorf1O96002 111 aa7.08□□□□□ -1.28
BRCA1-213ENST00000476777 P01737 135 aa7.08□□□□□ -1.28
BRCA1-213ENST00000476777 PET100P0DJ07 73 aa7.08□□□□□ -1.28
BRCA1-213ENST00000476777 ZNF56Q15929 161 aa7.08□□□□□ -1.28
BRCA1-213ENST00000476777 MAJINQ3KP22 176 aa7.08□□□□□ -1.28
BRCA1-213ENST00000476777 MZT2BQ6NZ67 158 aa7.08□□□□□ -1.28
BRCA1-213ENST00000476777 DERL1Q9BUN8 251 aa7.08□□□□□ -1.28
BRCA1-213ENST00000476777 CCDC32Q9BV29 185 aa7.08□□□□□ -1.28
BRCA1-213ENST00000476777 TRBV25-1A0A075B6N4 114 aa7.07□□□□□ -1.28
BRCA1-213ENST00000476777 PEX7O00628 323 aa7.07□□□□□ -1.28
BRCA1-213ENST00000476777 IFNA7P01567 189 aa7.07□□□□□ -1.28
BRCA1-213ENST00000476777 SRSF9Q13242 221 aaKnown RBP eCLIP7.07□□□□□ -1.28
BRCA1-213ENST00000476777 IQCJQ1A5X6 159 aa7.07□□□□□ -1.28
BRCA1-213ENST00000476777 ZNF674Q2M3X9 581 aa7.07□□□□□ -1.28
BRCA1-213ENST00000476777 C20orf203Q8NBC4 194 aa7.07□□□□□ -1.28
BRCA1-213ENST00000476777 PRSS3P2Q8NHM4 247 aa7.07□□□□□ -1.28
BRCA1-213ENST00000476777 LYPD6BQ8NI32 183 aa7.07□□□□□ -1.28
BRCA1-213ENST00000476777 IGKV2-24A0A0C4DH68 120 aa7.06□□□□□ -1.28
BRCA1-213ENST00000476777 NDUFS6O75380 124 aaKnown RBP7.06□□□□□ -1.28
BRCA1-213ENST00000476777 H2AFB1P0C5Y9 115 aa7.06□□□□□ -1.28
BRCA1-213ENST00000476777 GZMBP10144 247 aa7.06□□□□□ -1.28
BRCA1-213ENST00000476777 RAB5CP51148 216 aa7.06□□□□□ -1.28
BRCA1-213ENST00000476777 STPG4Q8N801 248 aa7.06□□□□□ -1.28
BRCA1-213ENST00000476777 OR10AG1Q8NH19 301 aa7.06□□□□□ -1.28
BRCA1-213ENST00000476777 PSMG3Q9BT73 122 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-213ENST00000476777 GFRA4Q9GZZ7 299 aa7.06□□□□□ -1.28
BRCA1-213ENST00000476777 ZFP30Q9Y2G7 519 aa7.06□□□□□ -1.28
BRCA1-213ENST00000476777 FAT4Q6V0I7 4981 aa7.06□□□□□ -1.28
BRCA1-213ENST00000476777 MBP02144 154 aa7.05□□□□□ -1.28
BRCA1-213ENST00000476777 ATP6V0CP27449 155 aa7.05□□□□□ -1.28
BRCA1-213ENST00000476777 RPS10P46783 165 aaKnown RBP7.05□□□□□ -1.28
BRCA1-213ENST00000476777 C15orf56Q8N910 161 aa7.05□□□□□ -1.28
BRCA1-213ENST00000476777 HIST1H2BAQ96A08 127 aa7.05□□□□□ -1.28
BRCA1-213ENST00000476777 SSBP4Q9BWG4 385 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-213ENST00000476777 ACTR3CQ9C0K3 210 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-213ENST00000476777 IGLV4-60A0A075B6I1 120 aa7.04□□□□□ -1.28
BRCA1-213ENST00000476777 IGHV1-24A0A0C4DH33 117 aa7.04□□□□□ -1.28
BRCA1-213ENST00000476777 A0A1B0GUV1 79 aa7.04□□□□□ -1.28
BRCA1-213ENST00000476777 F5H697 171 aa7.04□□□□□ -1.28
BRCA1-213ENST00000476777 UBE2G2P60604 165 aa7.04□□□□□ -1.28
BRCA1-213ENST00000476777 SERF2P84101 59 aa7.04□□□□□ -1.28
BRCA1-213ENST00000476777 ZNF471Q9BX82 626 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-213ENST00000476777 FAM74A7A6NL05 159 aa7.03□□□□□ -1.28
BRCA1-213ENST00000476777 LTAP01374 205 aa7.03□□□□□ -1.28
BRCA1-213ENST00000476777 ENKURQ8TC29 256 aa7.03□□□□□ -1.28
BRCA1-213ENST00000476777 FMC1Q96HJ9 113 aa7.03□□□□□ -1.28
BRCA1-213ENST00000476777 TNFSF18Q9UNG2 199 aa7.03□□□□□ -1.28
BRCA1-213ENST00000476777 A0A096LNI7 61 aa7.02□□□□□ -1.29
BRCA1-213ENST00000476777 MUC21A0A140T8X8 626 aa7.02□□□□□ -1.29
BRCA1-213ENST00000476777 INMT-MINDY4F8WBC2 141 aa7.02□□□□□ -1.29
BRCA1-213ENST00000476777 ZNF726P1Q15940 193 aa7.02□□□□□ -1.29
BRCA1-213ENST00000476777 HIGD2BQ4VC39 106 aa7.02□□□□□ -1.29
BRCA1-213ENST00000476777 CFAP161Q6P656 301 aa7.02□□□□□ -1.29
BRCA1-213ENST00000476777 INO80EQ8NBZ0 244 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-213ENST00000476777 AQP10Q96PS8 301 aa7.02□□□□□ -1.29
BRCA1-213ENST00000476777 NKX6-2Q9C056 277 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-213ENST00000476777 A6NHS1 94 aa7.01□□□□□ -1.29
BRCA1-213ENST00000476777 SNAI2O43623 268 aa7.01□□□□□ -1.29
BRCA1-213ENST00000476777 SSNA1O43805 119 aa7.01□□□□□ -1.29
BRCA1-213ENST00000476777 UBE2G1P62253 170 aa7.01□□□□□ -1.29
BRCA1-213ENST00000476777 Q6ZRP5 223 aa7.01□□□□□ -1.29
BRCA1-213ENST00000476777 TMEM243Q9BU79 118 aa7.01□□□□□ -1.29
BRCA1-213ENST00000476777 GAGE12HA6NDE8 117 aa7□□□□□ -1.29
BRCA1-213ENST00000476777 H7C1H1 209 aa7□□□□□ -1.29
BRCA1-213ENST00000476777 M0QY20 66 aa7□□□□□ -1.29
BRCA1-213ENST00000476777 CXCL1P09341 107 aa7□□□□□ -1.29
BRCA1-213ENST00000476777 OR5AL1P0C617 328 aa7□□□□□ -1.29
BRCA1-213ENST00000476777 DEFA3P59666 94 aa7□□□□□ -1.29
BRCA1-213ENST00000476777 SPANXN1Q5VSR9 72 aa7□□□□□ -1.29
BRCA1-213ENST00000476777 LINC00474Q9P2X8 69 aa7□□□□□ -1.29
BRCA1-213ENST00000476777 GVQW2A0A096LPI5 108 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-213ENST00000476777 CTXND1A0A1B0GTU2 59 aa6.99□□□□□ -1.29
BRCA1-213ENST00000476777 SULT1A2P50226 295 aa6.99□□□□□ -1.29
BRCA1-213ENST00000476777 SSTP61278 116 aa6.99□□□□□ -1.29
BRCA1-213ENST00000476777 MARVELD1Q9BSK0 173 aa6.99□□□□□ -1.29
BRCA1-213ENST00000476777 FAM231BA6NCW3 169 aa6.98□□□□□ -1.29
BRCA1-213ENST00000476777 SMIM17P0DL12 118 aa6.98□□□□□ -1.29
BRCA1-213ENST00000476777 NKX2-5P52952 324 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-213ENST00000476777 SUMO4Q6EEV6 95 aa6.97□□□□□ -1.29
BRCA1-213ENST00000476777 AP1S3Q96PC3 154 aa6.97□□□□□ -1.29
BRCA1-213ENST00000476777 TCEAL7Q9BRU2 100 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms